Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899719
Identifier: 159899719
GI number: 159899719
Start: 4049104
End: 4050033
Strand: Direct
Name: 159899719
Synonym: Haur_3201
Alternate gene names: NA
Gene position: 4049104-4050033 (Clockwise)
Preceding gene: 159899718
Following gene: 159899721
Centisome position: 63.8
GC content: 50.32
Gene sequence:
>930_bases ATGATGTCAGGTGAATTACACGTTATTTTTGGCACAGGCCCAATTGGTAAAGCGACCGCCCGTTGTTTGGTCAGCGCAGG TAAACAAGTGCGGATGATTAATCGTTCGGGCAAGGCTAGCCATCTGCCCGAGAGCGTTGAAGTCTTAGCTGGCGATATTT ATGATCAACATTTTGTAGCCCAACAAGCACAGGCTGCCACCAGCGTTTACCAATGTGCCCAACCAGCTTACTACGAATGG ACCAGCAAATTTCCGGCGATGCAAGCAGCAGTGATCGAGGGAGTCGCCCAAAGTAAGGCCAAATTGGTGGTGATGGAAAA TTTATATGGCTATGGGCGCAGCAACGGCCAACCAATGACTGAAACCACGCCATTCGCCGCCCATACCCGTAAGGGCAAAT TGCGAGCGCAGATGAGTGAGCAACTGTTTGCCGCCCATAATGCTGGCAAGATTCGCGCAACCAGCGTGCGGGCCTCGAAT TTCTATGGCCCCGAATATCAATTAATGGGCGATCAGGTAGTCAAGCCAGCCTTGCAAGGCAAAAAAGTTAATTTGCTGGG CAAAGCCGATGTTCTGCACAGCTTTAGTTATGTCAATGATATTGGAGCAAGCTTGGCAATCCTTGGCACTGACGAGCGTG GTTTAGGCCGACCGTGGCATGCCCCCAGCCCTGCCGCACTAACCCAACAGGAGTTTGTAGCAATTTTGGCCAAAGTTTTG GGCAAACCTGTTGGCTATCGCACCGTCAATACTGCCATGGTTTGGCTGCTTGGACGCTTTATCAAAGAATTGGCCGAAAC CGTCGAGATGATGTACGAGTGGCAAGCACCGTTCATTATGGATAGCAGCGCCTTTAGCAAAACCTTTGAGCTTGAAGCAA CCCCAATCGAACAGGGAATTAAAGCCATGGCCGATTGGTTTCGCAATTAA
Upstream 100 bases:
>100_bases TTGGTTTTGACGATCTAACTTAATTCAATTTGGCCGGCACGCTCAAGCAGTTTCGGCAACGAGGCTTAGTTTGCTGTTGC CAAAAATTAGCAAGGAATCA
Downstream 100 bases:
>100_bases CGTTCAGCAGGCAGCGCAATCAGATCAAAAGGTTGCGCTGCATTGCAAAGCCTTGACCAGCAATTGTTTATATTCAGCGC GTGGAATTTCATAGGCTCCA
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; Sugar Dehydratase/Epimerase; Nucleoside-Diphosphate-Sugar Epimerases; Saccharopine Dehydrogenase Related Protein; NmrA-Like Protein/Nucleoside-Diphosphate-Sugar Epimerase; NmrA Family Protein; Short-Chain Dehydrogenase/Reductase SDR; NAD Dependent Epimerase; NAD Dependent Epimerase/Dehydratase Family; 3-Beta Hydroxysteroid Dehydrogenase; Saccharopine Dehydrogenase; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MMSGELHVIFGTGPIGKATARCLVSAGKQVRMINRSGKASHLPESVEVLAGDIYDQHFVAQQAQAATSVYQCAQPAYYEW TSKFPAMQAAVIEGVAQSKAKLVVMENLYGYGRSNGQPMTETTPFAAHTRKGKLRAQMSEQLFAAHNAGKIRATSVRASN FYGPEYQLMGDQVVKPALQGKKVNLLGKADVLHSFSYVNDIGASLAILGTDERGLGRPWHAPSPAALTQQEFVAILAKVL GKPVGYRTVNTAMVWLLGRFIKELAETVEMMYEWQAPFIMDSSAFSKTFELEATPIEQGIKAMADWFRN
Sequences:
>Translated_309_residues MMSGELHVIFGTGPIGKATARCLVSAGKQVRMINRSGKASHLPESVEVLAGDIYDQHFVAQQAQAATSVYQCAQPAYYEW TSKFPAMQAAVIEGVAQSKAKLVVMENLYGYGRSNGQPMTETTPFAAHTRKGKLRAQMSEQLFAAHNAGKIRATSVRASN FYGPEYQLMGDQVVKPALQGKKVNLLGKADVLHSFSYVNDIGASLAILGTDERGLGRPWHAPSPAALTQQEFVAILAKVL GKPVGYRTVNTAMVWLLGRFIKELAETVEMMYEWQAPFIMDSSAFSKTFELEATPIEQGIKAMADWFRN >Mature_309_residues MMSGELHVIFGTGPIGKATARCLVSAGKQVRMINRSGKASHLPESVEVLAGDIYDQHFVAQQAQAATSVYQCAQPAYYEW TSKFPAMQAAVIEGVAQSKAKLVVMENLYGYGRSNGQPMTETTPFAAHTRKGKLRAQMSEQLFAAHNAGKIRATSVRASN FYGPEYQLMGDQVVKPALQGKKVNLLGKADVLHSFSYVNDIGASLAILGTDERGLGRPWHAPSPAALTQQEFVAILAKVL GKPVGYRTVNTAMVWLLGRFIKELAETVEMMYEWQAPFIMDSSAFSKTFELEATPIEQGIKAMADWFRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33828; Mature: 33828
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSGELHVIFGTGPIGKATARCLVSAGKQVRMINRSGKASHLPESVEVLAGDIYDQHFVA CCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH QQAQAATSVYQCAQPAYYEWTSKFPAMQAAVIEGVAQSKAKLVVMENLYGYGRSNGQPMT HHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHEEEEEHHHHCCCCCCCCCCC ETTPFAAHTRKGKLRAQMSEQLFAAHNAGKIRATSVRASNFYGPEYQLMGDQVVKPALQG CCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEECCHHHHHHHHCC KKVNLLGKADVLHSFSYVNDIGASLAILGTDERGLGRPWHAPSPAALTQQEFVAILAKVL CEEEEEEHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GKPVGYRTVNTAMVWLLGRFIKELAETVEMMYEWQAPFIMDSSAFSKTFELEATPIEQGI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCEEEEECCCHHHHH KAMADWFRN HHHHHHHCC >Mature Secondary Structure MMSGELHVIFGTGPIGKATARCLVSAGKQVRMINRSGKASHLPESVEVLAGDIYDQHFVA CCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH QQAQAATSVYQCAQPAYYEWTSKFPAMQAAVIEGVAQSKAKLVVMENLYGYGRSNGQPMT HHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHEEEEEHHHHCCCCCCCCCCC ETTPFAAHTRKGKLRAQMSEQLFAAHNAGKIRATSVRASNFYGPEYQLMGDQVVKPALQG CCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEECCHHHHHHHHCC KKVNLLGKADVLHSFSYVNDIGASLAILGTDERGLGRPWHAPSPAALTQQEFVAILAKVL CEEEEEEHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GKPVGYRTVNTAMVWLLGRFIKELAETVEMMYEWQAPFIMDSSAFSKTFELEATPIEQGI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCEEEEECCCHHHHH KAMADWFRN HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA