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The map label for this gene is clpS [H]

Identifier: 159899721

GI number: 159899721

Start: 4050670

End: 4051011

Strand: Direct

Name: clpS [H]

Synonym: Haur_3203

Alternate gene names: 159899721

Gene position: 4050670-4051011 (Clockwise)

Preceding gene: 159899719

Following gene: 159899722

Centisome position: 63.82

GC content: 48.25

Gene sequence:

>342_bases
ATGAATACACGACGGGATGTCGCAACCGCCGAACCACAAACAACAACTGATGTCGAGCTCGATTTTATCACGCTCAGCGA
TGAGGAACTGGAAAAACCCTATCGGGTTATTTTGCAAAACGATGATATCACGCCCATGGAAGTGGTCGTGTGGGTTTTGG
AAAAAGTCTTCGAGCAATCGTTTGAACAAGCCAAAAGGATTATGATCGAAGCCCATGTCAAAGGCCATGCTTTGGTCACA
ATTTTGCCCTTCAAAGAAGCTAGTGCCCGCGTCTACAGCGCTCAGAGCCGCGCTCGCGATATGGGCTTTCCGCTGGTGCT
CTTTTTGGAGCCAGATTTTTAA

Upstream 100 bases:

>100_bases
CCATCGGAAAGATTCCTTGGGCGTAACCATAAATTAATAATTGTGGTGAGAGTCGCTTGGTCATGCTATCATGTCTCCAA
AAAGTGAGGTCAACCAACCA

Downstream 100 bases:

>100_bases
TAATCGGGGGTCGGGGTCTGGTTATTGGGGAGTGGGCTGAGGGAATATAGCATAGCACTGGGCCAATTCTGTGGTAGTTT
GGTAATGGCAGCAGAATAAT

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MNTRRDVATAEPQTTTDVELDFITLSDEELEKPYRVILQNDDITPMEVVVWVLEKVFEQSFEQAKRIMIEAHVKGHALVT
ILPFKEASARVYSAQSRARDMGFPLVLFLEPDF

Sequences:

>Translated_113_residues
MNTRRDVATAEPQTTTDVELDFITLSDEELEKPYRVILQNDDITPMEVVVWVLEKVFEQSFEQAKRIMIEAHVKGHALVT
ILPFKEASARVYSAQSRARDMGFPLVLFLEPDF
>Mature_113_residues
MNTRRDVATAEPQTTTDVELDFITLSDEELEKPYRVILQNDDITPMEVVVWVLEKVFEQSFEQAKRIMIEAHVKGHALVT
ILPFKEASARVYSAQSRARDMGFPLVLFLEPDF

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=97, Percent_Identity=38.1443298969072, Blast_Score=62, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 13014; Mature: 13014

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTRRDVATAEPQTTTDVELDFITLSDEELEKPYRVILQNDDITPMEVVVWVLEKVFEQS
CCCCCCCCCCCCCCCCCEEEEEEEECHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
FEQAKRIMIEAHVKGHALVTILPFKEASARVYSAQSRARDMGFPLVLFLEPDF
HHHHHHEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC
>Mature Secondary Structure
MNTRRDVATAEPQTTTDVELDFITLSDEELEKPYRVILQNDDITPMEVVVWVLEKVFEQS
CCCCCCCCCCCCCCCCCEEEEEEEECHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
FEQAKRIMIEAHVKGHALVTILPFKEASARVYSAQSRARDMGFPLVLFLEPDF
HHHHHHEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA