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The map label for this gene is 159899718

Identifier: 159899718

GI number: 159899718

Start: 4048328

End: 4049026

Strand: Direct

Name: 159899718

Synonym: Haur_3200

Alternate gene names: NA

Gene position: 4048328-4049026 (Clockwise)

Preceding gene: 159899717

Following gene: 159899719

Centisome position: 63.79

GC content: 47.21

Gene sequence:

>699_bases
ATGGCGCGGACTCGTAATCAAGCACTCAACGATGAAACGATCATTCAAATTAAGCAAGCGGCCCGCCAACTGATGGCGCA
ACATGGCACAGCTGGCTTATCAATTCGTGGGATTGCCAAAGTTCTATCGGTTAGCCCACCAGCCCTGTACCACTATTTTG
CTAATTTGGAAGACCTGATTACAACCTTGATTGCCGATAGTTTTAATAGTTTGGCCGATACCTTGGATGCTGTTGGGCTT
AAATCGCGTACAAAAACCAAGGCTGGGCGTTTGTTGACGGTATTTGAGGCCTATCGCCAATGGGCCTTCGATCATCCAAT
CGACTTTCAATTGATCTATGGCAATCCAATTCCTGGCTATAACGCGCCGCGCGAAATTACGGTGCCAGCGGTGGTTCGCA
CCTTTATTACGCCAGTACGCTTGGCCGATCTCGCGATCAAAGCTGGCGAATCAAGCCTCAACGATTTTCGTATTCCAGCA
TTTTGTGCTGAGCATATGAATGGCATGATTGCCGAACATGGCTATCCGGTGTCGTTAGAGTCGATGTACCTGATTATGAC
CCTGTGGACACAAATTCATGGCCTGATTATGTTGGAATTGTATGGACATCTTAGCTCGAATGTTGGCAATGCCGACGCTT
TCTATCGCCATCGCGTCATAGAAATGCTGCATACGTTTGGTTTTGACGATCTAACTTAA

Upstream 100 bases:

>100_bases
TGGCTTTGCCATGATTGGTCTTTTTTCGTCCTTGACACAATTCAATTTACATTGTAAATTCATTTATAGATTTACACTGT
AAATCTATTGAGGTTTTGAA

Downstream 100 bases:

>100_bases
TTCAATTTGGCCGGCACGCTCAAGCAGTTTCGGCAACGAGGCTTAGTTTGCTGTTGCCAAAAATTAGCAAGGAATCAATG
ATGTCAGGTGAATTACACGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MARTRNQALNDETIIQIKQAARQLMAQHGTAGLSIRGIAKVLSVSPPALYHYFANLEDLITTLIADSFNSLADTLDAVGL
KSRTKTKAGRLLTVFEAYRQWAFDHPIDFQLIYGNPIPGYNAPREITVPAVVRTFITPVRLADLAIKAGESSLNDFRIPA
FCAEHMNGMIAEHGYPVSLESMYLIMTLWTQIHGLIMLELYGHLSSNVGNADAFYRHRVIEMLHTFGFDDLT

Sequences:

>Translated_232_residues
MARTRNQALNDETIIQIKQAARQLMAQHGTAGLSIRGIAKVLSVSPPALYHYFANLEDLITTLIADSFNSLADTLDAVGL
KSRTKTKAGRLLTVFEAYRQWAFDHPIDFQLIYGNPIPGYNAPREITVPAVVRTFITPVRLADLAIKAGESSLNDFRIPA
FCAEHMNGMIAEHGYPVSLESMYLIMTLWTQIHGLIMLELYGHLSSNVGNADAFYRHRVIEMLHTFGFDDLT
>Mature_231_residues
ARTRNQALNDETIIQIKQAARQLMAQHGTAGLSIRGIAKVLSVSPPALYHYFANLEDLITTLIADSFNSLADTLDAVGLK
SRTKTKAGRLLTVFEAYRQWAFDHPIDFQLIYGNPIPGYNAPREITVPAVVRTFITPVRLADLAIKAGESSLNDFRIPAF
CAEHMNGMIAEHGYPVSLESMYLIMTLWTQIHGLIMLELYGHLSSNVGNADAFYRHRVIEMLHTFGFDDLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 25895; Mature: 25764

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTRNQALNDETIIQIKQAARQLMAQHGTAGLSIRGIAKVLSVSPPALYHYFANLEDLI
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
TTLIADSFNSLADTLDAVGLKSRTKTKAGRLLTVFEAYRQWAFDHPIDFQLIYGNPIPGY
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
NAPREITVPAVVRTFITPVRLADLAIKAGESSLNDFRIPAFCAEHMNGMIAEHGYPVSLE
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCHH
SMYLIMTLWTQIHGLIMLELYGHLSSNVGNADAFYRHRVIEMLHTFGFDDLT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ARTRNQALNDETIIQIKQAARQLMAQHGTAGLSIRGIAKVLSVSPPALYHYFANLEDLI
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
TTLIADSFNSLADTLDAVGLKSRTKTKAGRLLTVFEAYRQWAFDHPIDFQLIYGNPIPGY
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
NAPREITVPAVVRTFITPVRLADLAIKAGESSLNDFRIPAFCAEHMNGMIAEHGYPVSLE
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCHH
SMYLIMTLWTQIHGLIMLELYGHLSSNVGNADAFYRHRVIEMLHTFGFDDLT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]