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The map label for this gene is lcp [H]

Identifier: 159899717

GI number: 159899717

Start: 4047095

End: 4048186

Strand: Direct

Name: lcp [H]

Synonym: Haur_3199

Alternate gene names: 159899717

Gene position: 4047095-4048186 (Clockwise)

Preceding gene: 159899716

Following gene: 159899718

Centisome position: 63.77

GC content: 52.84

Gene sequence:

>1092_bases
ATGCGTTACACCCAGCCCTATCTTGAATCATTGCGCCAAATTGGCGACCCTGCTGCCGATAGCTTGATTGAGCAATTGGC
CAACAATGGCGATTTAGCGCGGGTTAGTCAGGTGTTGCGCCAGATCACCAAAAACGATCAACCCTTGCCTCGCGATTTGC
CCCCCGTTCTGTTTGATTGGCTCGAACACCATTGCAGCCCCTCTGGTTCAATCGATTGGCAACGGATCAATAATGGCGCA
GCATTTTTTGCTCGCTATGGCATGGCGATCACCGTCGTGCTCTCAACGGCAGCTTTGGTTGGCTGTTACGCTGCTCAAAA
AGGGGTCAAAGTGCTGACCCAAACCCAACGCTTGCAGGCCGAACCTTATCGCCGAGTCACTGAATCGGGCCATTTTGTGA
TGACGGTATTACAACCGCAGGCGCTCCAAAACAACGGGGCTGGCTTGCAGGTGATTCAAAAAGTGCGCCTAATGCACGCC
GCTGTGCGTTATCAAATTGCTCACGCTGGCCAATGGCAGAGCGCCGAGCTTGGTGTACCGATTTGTCAAGAAGATATGCT
GGGCACGCTGATGGTATTTTCGTATGGCGTAATTTGGGGCTTGGAGCAACTGGGCTATCGCATAGCCGCACAAGCTGCCG
AAAATTTTTTGTATACTTGGTGTGTGATTGGCGAACTGATTGGGGTTGATCCGGCCAGCTTACCACGCTCGATGGCTGAA
GCCGAGGATCTGGCCTATAGCATCTCCAATCGTCAGCATGGCCCATCTGATGAGGGGCGCGAATTGACCCAAGCGCTACT
AGCAATGCACACTGGGCTCTTACCAGGCCGCTTTTTCGATGGCATGGTTCCAGCATTGATTCATCATCTCGCAGGTGATG
AGGTTGCTCGCTGGATGGGCGTGCCGCAAACCCGTTGGAAATATGCGGTACGCTATCTCAAAACCCTCAATAGTGCAATG
CGTAGCATCACCCAACGCTTTCCAGCTATCGATGAGCAATTTGATCGACTGACCTTCTTGCTGCTCCAACGTTGGACTGG
CGCAATCCATCGTGGCGAACTTAGCGAAACTCTCAGCGAACGCGTGGCCTAA

Upstream 100 bases:

>100_bases
GATCCTTTGGTTCTCAGCCTTCTACCCTTTCTATGCAAATCAGTTGTTGTAGCCAACCAGCTTGGCATGGTACTGAGCGT
TGCAGAAGTAAAGGGGAAGT

Downstream 100 bases:

>100_bases
TTTTCAACCAAGCCCCAGCCAATGCTACACTGAGACCGATCTGGCTTTGCCATGATTGGTCTTTTTTCGTCCTTGACACA
ATTCAATTTACATTGTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MRYTQPYLESLRQIGDPAADSLIEQLANNGDLARVSQVLRQITKNDQPLPRDLPPVLFDWLEHHCSPSGSIDWQRINNGA
AFFARYGMAITVVLSTAALVGCYAAQKGVKVLTQTQRLQAEPYRRVTESGHFVMTVLQPQALQNNGAGLQVIQKVRLMHA
AVRYQIAHAGQWQSAELGVPICQEDMLGTLMVFSYGVIWGLEQLGYRIAAQAAENFLYTWCVIGELIGVDPASLPRSMAE
AEDLAYSISNRQHGPSDEGRELTQALLAMHTGLLPGRFFDGMVPALIHHLAGDEVARWMGVPQTRWKYAVRYLKTLNSAM
RSITQRFPAIDEQFDRLTFLLLQRWTGAIHRGELSETLSERVA

Sequences:

>Translated_363_residues
MRYTQPYLESLRQIGDPAADSLIEQLANNGDLARVSQVLRQITKNDQPLPRDLPPVLFDWLEHHCSPSGSIDWQRINNGA
AFFARYGMAITVVLSTAALVGCYAAQKGVKVLTQTQRLQAEPYRRVTESGHFVMTVLQPQALQNNGAGLQVIQKVRLMHA
AVRYQIAHAGQWQSAELGVPICQEDMLGTLMVFSYGVIWGLEQLGYRIAAQAAENFLYTWCVIGELIGVDPASLPRSMAE
AEDLAYSISNRQHGPSDEGRELTQALLAMHTGLLPGRFFDGMVPALIHHLAGDEVARWMGVPQTRWKYAVRYLKTLNSAM
RSITQRFPAIDEQFDRLTFLLLQRWTGAIHRGELSETLSERVA
>Mature_363_residues
MRYTQPYLESLRQIGDPAADSLIEQLANNGDLARVSQVLRQITKNDQPLPRDLPPVLFDWLEHHCSPSGSIDWQRINNGA
AFFARYGMAITVVLSTAALVGCYAAQKGVKVLTQTQRLQAEPYRRVTESGHFVMTVLQPQALQNNGAGLQVIQKVRLMHA
AVRYQIAHAGQWQSAELGVPICQEDMLGTLMVFSYGVIWGLEQLGYRIAAQAAENFLYTWCVIGELIGVDPASLPRSMAE
AEDLAYSISNRQHGPSDEGRELTQALLAMHTGLLPGRFFDGMVPALIHHLAGDEVARWMGVPQTRWKYAVRYLKTLNSAM
RSITQRFPAIDEQFDRLTFLLLQRWTGAIHRGELSETLSERVA

Specific function: Responsible for the initial cleavage of poly(cis-1,4- isoprene), which is essential for the process of rubber degradation. Produces clear zones on natural rubber latex overlay agar plates [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018713
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09995 DUF2236 [H]

EC number: NA

Molecular weight: Translated: 40586; Mature: 40586

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYTQPYLESLRQIGDPAADSLIEQLANNGDLARVSQVLRQITKNDQPLPRDLPPVLFDW
CCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LEHHCSPSGSIDWQRINNGAAFFARYGMAITVVLSTAALVGCYAAQKGVKVLTQTQRLQA
HHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EPYRRVTESGHFVMTVLQPQALQNNGAGLQVIQKVRLMHAAVRYQIAHAGQWQSAELGVP
HHHHHHHCCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ICQEDMLGTLMVFSYGVIWGLEQLGYRIAAQAAENFLYTWCVIGELIGVDPASLPRSMAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AEDLAYSISNRQHGPSDEGRELTQALLAMHTGLLPGRFFDGMVPALIHHLAGDEVARWMG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
VPQTRWKYAVRYLKTLNSAMRSITQRFPAIDEQFDRLTFLLLQRWTGAIHRGELSETLSE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVA
HCC
>Mature Secondary Structure
MRYTQPYLESLRQIGDPAADSLIEQLANNGDLARVSQVLRQITKNDQPLPRDLPPVLFDW
CCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LEHHCSPSGSIDWQRINNGAAFFARYGMAITVVLSTAALVGCYAAQKGVKVLTQTQRLQA
HHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EPYRRVTESGHFVMTVLQPQALQNNGAGLQVIQKVRLMHAAVRYQIAHAGQWQSAELGVP
HHHHHHHCCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
ICQEDMLGTLMVFSYGVIWGLEQLGYRIAAQAAENFLYTWCVIGELIGVDPASLPRSMAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AEDLAYSISNRQHGPSDEGRELTQALLAMHTGLLPGRFFDGMVPALIHHLAGDEVARWMG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
VPQTRWKYAVRYLKTLNSAMRSITQRFPAIDEQFDRLTFLLLQRWTGAIHRGELSETLSE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVA
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA