Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899716

Identifier: 159899716

GI number: 159899716

Start: 4045702

End: 4046688

Strand: Direct

Name: 159899716

Synonym: Haur_3198

Alternate gene names: NA

Gene position: 4045702-4046688 (Clockwise)

Preceding gene: 159899711

Following gene: 159899717

Centisome position: 63.75

GC content: 51.27

Gene sequence:

>987_bases
ATGGAAGATTTTTTGCGCCGAGCAGCGGCGGATTTACATATTGGGGTTGAACAAACCAGCCCAACCACTTGGACACTCAC
GATCCCCGGTAGTTTAGGGCGGGTTTTTGGTAAAGAAACTGTTTTAGTAACAACTGATAAGCAGGTCGCGGCGCTCGACC
CTGATCTTCAATTGCTTTCGCCCAACTCATCGTTGACCTTGCGTTTAGCCGAACAACTGCGCTCACGTGGGCGGCCAACT
CATCGCGCTCGCTTGGAATGGTATCCAGATCAAGTGTCATTGCTGGCCGATGTTCAGGAAGCGCAATTAATTCAAGGCCC
AAACTTGCAACTGAGTGGGCTACAACAGCATATTGTGTTGCGGATTACCTTTCGTATTCGCTTTGAACGCGAGGTGATTG
AGGAAAAAATGGTGGCCTGTTGTGTCGATTATGAAACTGGCCAAGTTTGGCCAACCATCACCGACATCACCAATTTACGC
GATCAGCTTACGCCGTTGCCATCAACCGGCCTGACCGATGAGCATGTGAATGTGGCTTTGCACCATGCTCGCCGCTGGCT
TGAGCGCTTGCTCTACCCGCAAAAAGCCCTGCACGAAGCCCAATTGGCCCAATTACTGGCCGTTGAAAAAGCGCGGATCA
ACGCCTTCTACGATGCGCTCGAAGAAGATTCAGGCCTTGCGCTCGGAGCCAAAGAGGGCGAATCGAACAAGCAATATGCC
CTCGAAGAAGAGCGTAAACGCCTGCTTGACGAGCAAGAATATCGCTATGCCTTGTCGTTGGCTGCCGAAACTGTCAGCGT
AGCCACAATTCAAACGCCCGTGTTGCATATTGGCAGCAAACACCAACCGCATTTGATTGCGATCTCGCCCTTATTTGAGC
CGATGATTCAATTGCCCCATTGCCAAACCTGTGGCCGCCAAGCCAGTTTGGTGGCGCATAAAGAACAACTGGTTTGCAAT
GTTTGCCATCAGGTGCTAGCGCAATAA

Upstream 100 bases:

>100_bases
AGGTAAAAGATATTAAGGTTGGGGCAAGTATAGCAAACTTTTGGGCATGGTAAAATAGCATGATGCTGATAGATTGCTCA
ATACGCTGAATGGGAATATT

Downstream 100 bases:

>100_bases
GTTTTTCACAGCCCCAACCCCTCACCTCAACCTTTCAAGGGTAGGTTTTCAAAGATAGCTGAGTTCCCTCACCCCCTAGC
CCCCTCTCCCGCCCAGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MEDFLRRAAADLHIGVEQTSPTTWTLTIPGSLGRVFGKETVLVTTDKQVAALDPDLQLLSPNSSLTLRLAEQLRSRGRPT
HRARLEWYPDQVSLLADVQEAQLIQGPNLQLSGLQQHIVLRITFRIRFEREVIEEKMVACCVDYETGQVWPTITDITNLR
DQLTPLPSTGLTDEHVNVALHHARRWLERLLYPQKALHEAQLAQLLAVEKARINAFYDALEEDSGLALGAKEGESNKQYA
LEEERKRLLDEQEYRYALSLAAETVSVATIQTPVLHIGSKHQPHLIAISPLFEPMIQLPHCQTCGRQASLVAHKEQLVCN
VCHQVLAQ

Sequences:

>Translated_328_residues
MEDFLRRAAADLHIGVEQTSPTTWTLTIPGSLGRVFGKETVLVTTDKQVAALDPDLQLLSPNSSLTLRLAEQLRSRGRPT
HRARLEWYPDQVSLLADVQEAQLIQGPNLQLSGLQQHIVLRITFRIRFEREVIEEKMVACCVDYETGQVWPTITDITNLR
DQLTPLPSTGLTDEHVNVALHHARRWLERLLYPQKALHEAQLAQLLAVEKARINAFYDALEEDSGLALGAKEGESNKQYA
LEEERKRLLDEQEYRYALSLAAETVSVATIQTPVLHIGSKHQPHLIAISPLFEPMIQLPHCQTCGRQASLVAHKEQLVCN
VCHQVLAQ
>Mature_328_residues
MEDFLRRAAADLHIGVEQTSPTTWTLTIPGSLGRVFGKETVLVTTDKQVAALDPDLQLLSPNSSLTLRLAEQLRSRGRPT
HRARLEWYPDQVSLLADVQEAQLIQGPNLQLSGLQQHIVLRITFRIRFEREVIEEKMVACCVDYETGQVWPTITDITNLR
DQLTPLPSTGLTDEHVNVALHHARRWLERLLYPQKALHEAQLAQLLAVEKARINAFYDALEEDSGLALGAKEGESNKQYA
LEEERKRLLDEQEYRYALSLAAETVSVATIQTPVLHIGSKHQPHLIAISPLFEPMIQLPHCQTCGRQASLVAHKEQLVCN
VCHQVLAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36942; Mature: 36942

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDFLRRAAADLHIGVEQTSPTTWTLTIPGSLGRVFGKETVLVTTDKQVAALDPDLQLLS
CHHHHHHHHHHHEEEEECCCCCEEEEECCCHHHHHCCCCEEEEECCCEEEEECCCCEEEC
PNSSLTLRLAEQLRSRGRPTHRARLEWYPDQVSLLADVQEAQLIQGPNLQLSGLQQHIVL
CCCCCHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCEECCCCEEEEE
RITFRIRFEREVIEEKMVACCVDYETGQVWPTITDITNLRDQLTPLPSTGLTDEHVNVAL
EEEEEEEEHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH
HHARRWLERLLYPQKALHEAQLAQLLAVEKARINAFYDALEEDSGLALGAKEGESNKQYA
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH
LEEERKRLLDEQEYRYALSLAAETVSVATIQTPVLHIGSKHQPHLIAISPLFEPMIQLPH
HHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECHHHCCCCCCCCCEEEECHHHHHHHCCCC
CQTCGRQASLVAHKEQLVCNVCHQVLAQ
CHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEDFLRRAAADLHIGVEQTSPTTWTLTIPGSLGRVFGKETVLVTTDKQVAALDPDLQLLS
CHHHHHHHHHHHEEEEECCCCCEEEEECCCHHHHHCCCCEEEEECCCEEEEECCCCEEEC
PNSSLTLRLAEQLRSRGRPTHRARLEWYPDQVSLLADVQEAQLIQGPNLQLSGLQQHIVL
CCCCCHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCEECCCCEEEEE
RITFRIRFEREVIEEKMVACCVDYETGQVWPTITDITNLRDQLTPLPSTGLTDEHVNVAL
EEEEEEEEHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH
HHARRWLERLLYPQKALHEAQLAQLLAVEKARINAFYDALEEDSGLALGAKEGESNKQYA
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH
LEEERKRLLDEQEYRYALSLAAETVSVATIQTPVLHIGSKHQPHLIAISPLFEPMIQLPH
HHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECHHHCCCCCCCCCEEEECHHHHHHHCCCC
CQTCGRQASLVAHKEQLVCNVCHQVLAQ
CHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA