The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159899578

Identifier: 159899578

GI number: 159899578

Start: 3865591

End: 3866880

Strand: Direct

Name: 159899578

Synonym: Haur_3059

Alternate gene names: NA

Gene position: 3865591-3866880 (Clockwise)

Preceding gene: 159899577

Following gene: 159899579

Centisome position: 60.91

GC content: 52.56

Gene sequence:

>1290_bases
ATGGATTTAACCCGTCGTCAATTTGTAGTTGGCTGTAGCAGCGCGATTGCAGCTATGGCTGGTGGTCGGCTGGGTGGTTT
GGCTTTTGCCGAGCCAGGTGATATTAACCGTGATATTTTTGTGGTGGTGTTTCTGCGTGGTGGTTGCGATGGCATCGGTA
TCGTTTCGCCGCTTGATGATGCCAATTTTCAAGCCGCCCGTAGCACAATCACCTTTCCAAGCAGTGGCACAGGCGCGGGC
TTTGAATTAGGTTCATTGAGCAATGTGCCGTTTTGGTTGCACCCCAAAGCGGCTGCCTTCAAAGAACTCTACGATAGCCA
AGATTTGGCCTTTATTCACGCTAGCGGCTTGACCAACGGCACCCGCAGCCACTTCGATGCCATGGATTTTATGGAACGTG
GCACGCCCGACAATAAATCAACTAGCACAGGTTGGCTGACCCGCCACATGGCTGCCACTCGTCCCGATGGGGTTGTGCCA
GTTATGTCAACAGGATCAGCTTTACCTGCTTCGTTGCTTGGCAGCCCGAATGCCGTCACGATTTCGAACGTGCAGCGTTA
CGCTATGCAAGGCTACTCGACCTATGGGGCGCAACAACAAGCCTCATTAAACGAAATTTATAGCCAAACTGGCAGCTTGC
TTGATGGCCCAGCCACCCGTTTGCTTAGCTCAATCGCCGCAGTCAAGGCACGCAACCCCGCCAATCCCTACGTGCCAATT
ACCACCTATCCTGCTGGGGGCTTATCGGATTCGCTCAAAGCCATCGCCCAGATGATCAAACTGGATGTTGGTTTGCAAGT
TGCGACGCTTGATTTTGGTGGCTGGGATACTCATGAATCGCAGGTGCCAATTTTGGGCAACCAACTTGATTTATTGACGC
GTTCGCTGCATGCCTTCTACAACGACTTGGTTGATTACCACAGCAAGTTGACGATTGTGGTGATGAGCGAATTTGGCCGT
CGCTTGAAGGCCAATCGTAGTGCTGGCACCGACCATGGCCATGGCAATTTGGCGATGGTTTTGGGCGGCAACGTCAATGG
TGGGCGAATTTTCGGGCGCTGGCCAGGCCTCGCCAATGCCCAACTCGACCATGGCGTTGATTTGGCGATTACCACCGACT
ATCGCACGATTTTGAGCGAAATTGTGGTGCGCCGCTTGCGCAACAATCGTTTAGGCTTGGTTTTCCCACAAATTAGCCAA
TATCAACCGCTTGGCTTAGTACGGGGCACCGATCTAACAATTGATTGGACTTCAGGCTTCCGCTCATATTTACCAATGGC
CCGCCGCTAG

Upstream 100 bases:

>100_bases
ACCACCAACTGGAACCGCCAATGACGTTAAATTACGCTTGAGCAGCCTTGTGCATATGATCGGCATGCTCCCTGAATTTT
ATACGCGCTAGGAGGCTGCA

Downstream 100 bases:

>100_bases
CAGCACCGTTGCGTCCAACAGCTCGATTATAGGGTTATTAGCAGCCATCCAGATTTTGGATGGCTGCTAATCCATGTTGG
GATATATTGTAAAAAGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MDLTRRQFVVGCSSAIAAMAGGRLGGLAFAEPGDINRDIFVVVFLRGGCDGIGIVSPLDDANFQAARSTITFPSSGTGAG
FELGSLSNVPFWLHPKAAAFKELYDSQDLAFIHASGLTNGTRSHFDAMDFMERGTPDNKSTSTGWLTRHMAATRPDGVVP
VMSTGSALPASLLGSPNAVTISNVQRYAMQGYSTYGAQQQASLNEIYSQTGSLLDGPATRLLSSIAAVKARNPANPYVPI
TTYPAGGLSDSLKAIAQMIKLDVGLQVATLDFGGWDTHESQVPILGNQLDLLTRSLHAFYNDLVDYHSKLTIVVMSEFGR
RLKANRSAGTDHGHGNLAMVLGGNVNGGRIFGRWPGLANAQLDHGVDLAITTDYRTILSEIVVRRLRNNRLGLVFPQISQ
YQPLGLVRGTDLTIDWTSGFRSYLPMARR

Sequences:

>Translated_429_residues
MDLTRRQFVVGCSSAIAAMAGGRLGGLAFAEPGDINRDIFVVVFLRGGCDGIGIVSPLDDANFQAARSTITFPSSGTGAG
FELGSLSNVPFWLHPKAAAFKELYDSQDLAFIHASGLTNGTRSHFDAMDFMERGTPDNKSTSTGWLTRHMAATRPDGVVP
VMSTGSALPASLLGSPNAVTISNVQRYAMQGYSTYGAQQQASLNEIYSQTGSLLDGPATRLLSSIAAVKARNPANPYVPI
TTYPAGGLSDSLKAIAQMIKLDVGLQVATLDFGGWDTHESQVPILGNQLDLLTRSLHAFYNDLVDYHSKLTIVVMSEFGR
RLKANRSAGTDHGHGNLAMVLGGNVNGGRIFGRWPGLANAQLDHGVDLAITTDYRTILSEIVVRRLRNNRLGLVFPQISQ
YQPLGLVRGTDLTIDWTSGFRSYLPMARR
>Mature_429_residues
MDLTRRQFVVGCSSAIAAMAGGRLGGLAFAEPGDINRDIFVVVFLRGGCDGIGIVSPLDDANFQAARSTITFPSSGTGAG
FELGSLSNVPFWLHPKAAAFKELYDSQDLAFIHASGLTNGTRSHFDAMDFMERGTPDNKSTSTGWLTRHMAATRPDGVVP
VMSTGSALPASLLGSPNAVTISNVQRYAMQGYSTYGAQQQASLNEIYSQTGSLLDGPATRLLSSIAAVKARNPANPYVPI
TTYPAGGLSDSLKAIAQMIKLDVGLQVATLDFGGWDTHESQVPILGNQLDLLTRSLHAFYNDLVDYHSKLTIVVMSEFGR
RLKANRSAGTDHGHGNLAMVLGGNVNGGRIFGRWPGLANAQLDHGVDLAITTDYRTILSEIVVRRLRNNRLGLVFPQISQ
YQPLGLVRGTDLTIDWTSGFRSYLPMARR

Specific function: Unknown

COG id: COG4102

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46067; Mature: 46067

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLTRRQFVVGCSSAIAAMAGGRLGGLAFAEPGDINRDIFVVVFLRGGCDGIGIVSPLDD
CCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
ANFQAARSTITFPSSGTGAGFELGSLSNVPFWLHPKAAAFKELYDSQDLAFIHASGLTNG
CCCHHHHCEEECCCCCCCCCEECCCCCCCCEEECCHHHHHHHHHCCCCEEEEEECCCCCC
TRSHFDAMDFMERGTPDNKSTSTGWLTRHMAATRPDGVVPVMSTGSALPASLLGSPNAVT
CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCCEEE
ISNVQRYAMQGYSTYGAQQQASLNEIYSQTGSLLDGPATRLLSSIAAVKARNPANPYVPI
HHHHHHHHHHCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE
TTYPAGGLSDSLKAIAQMIKLDVGLQVATLDFGGWDTHESQVPILGNQLDLLTRSLHAFY
EECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
NDLVDYHSKLTIVVMSEFGRRLKANRSAGTDHGHGNLAMVLGGNVNGGRIFGRWPGLANA
HHHHHHCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCC
QLDHGVDLAITTDYRTILSEIVVRRLRNNRLGLVFPQISQYQPLGLVRGTDLTIDWTSGF
CCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCEEEEECCCCH
RSYLPMARR
HHHCCCCCC
>Mature Secondary Structure
MDLTRRQFVVGCSSAIAAMAGGRLGGLAFAEPGDINRDIFVVVFLRGGCDGIGIVSPLDD
CCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
ANFQAARSTITFPSSGTGAGFELGSLSNVPFWLHPKAAAFKELYDSQDLAFIHASGLTNG
CCCHHHHCEEECCCCCCCCCEECCCCCCCCEEECCHHHHHHHHHCCCCEEEEEECCCCCC
TRSHFDAMDFMERGTPDNKSTSTGWLTRHMAATRPDGVVPVMSTGSALPASLLGSPNAVT
CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCCEEE
ISNVQRYAMQGYSTYGAQQQASLNEIYSQTGSLLDGPATRLLSSIAAVKARNPANPYVPI
HHHHHHHHHHCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE
TTYPAGGLSDSLKAIAQMIKLDVGLQVATLDFGGWDTHESQVPILGNQLDLLTRSLHAFY
EECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
NDLVDYHSKLTIVVMSEFGRRLKANRSAGTDHGHGNLAMVLGGNVNGGRIFGRWPGLANA
HHHHHHCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCC
QLDHGVDLAITTDYRTILSEIVVRRLRNNRLGLVFPQISQYQPLGLVRGTDLTIDWTSGF
CCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCEEEEECCCCH
RSYLPMARR
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA