Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899577

Identifier: 159899577

GI number: 159899577

Start: 3863914

End: 3865581

Strand: Direct

Name: 159899577

Synonym: Haur_3058

Alternate gene names: NA

Gene position: 3863914-3865581 (Clockwise)

Preceding gene: 159899575

Following gene: 159899578

Centisome position: 60.88

GC content: 52.4

Gene sequence:

>1668_bases
ATGTCGCTGTCGCGTCGCCAGTTATTGTTGGGCGCTGCGCTAGGGGCCACAGGCGCAGTCGTTCATGAGGATGTTGGGGC
AGCGCCGCTGCAACCCTCGACAACTGAAGCCATGGCAACTCCGCCATTCGAGGTCATCGCGCTCTCGCGCATGGCCTACG
GAGCACGTTCGGGCGATTTCGCCCGAGTTCGTAGTATGGGTTTAACTGCCTATGTCGATGAGCAGCTTAACCCTAATTTC
AACAACGACACCGATTGTAACACCCGTATCGCCAACGCCACCTTGCGCATTGTCTACGCCGCTGGCACGGGCTTTCCGGC
CATGGATGAAATGCGTGGCCTTGTTACCCTCAACAAAACCCAGCCCGAATTATGGGAATTGCGCGTACATCCAGCCAACG
CTGAGCGCATTCGCCCAATCGATGAAGTGGTAGCCGCCAATTGGATTCGCGCAATCTACAGTAAATGGCAACTATTCGAG
ATTATGACCGATTTTTGGCATAATCACTTCAATGTCTGGGCCTATAGCGATACGCGCATCTCTTCGCTTTGGCCCTATTA
CGACAAAAGCGTGATTCGCGCCAATTGTTTTGGTAACTTCCGCAGCTTTCTCGAAGCGGTGGCCACCAGCCCAGCCATGC
TGTATTACCTTGATAATGCGACCAGCCGCGATGGCCCCGCCAACGAAAATTATGCCCGTGAACTATTTGAATTGCACACC
TTTGGTTCGCAAAATTACCTCAATAATATCTACGACAACTGGCAAGAAGTACCGCGCGATTCGCAAGGCCGCCCAATCGG
CTATATCGACCAAGATGTGTATGAGGCGGCCCGCGCCTTTACAGGCTGGACGGTGGCCGATGGCACAGGCGGCATTCCCA
ACACGGGTTTATTCCATTATCTCGATACATGGAACGATAATGCCCAAAAGATTGTGCTGGCCAACTTCTTAAATGCCAAT
GCTGGCCCCCAAGCTCATGGCAAAAAGGTTTTGGATCTTGTAGCCCAACATCCGGCCACAATTCGCAATCTTTGTACCAA
ACTGTGTCGCCGTTTGGTCAGCGACAATCCACCAAGCACGCTGGTAGATAAAGCAGTCGCCACATGGACAGCCAACTATT
CAGCCCCTGATCAGATTAAGAAAACCATTCGCACAATTTTGCTAGCTCCCGAATTTTTGAGCACATGGGGTGGCAAGATT
CGCCGCCCGAATGAAGTTGTTGCCGCCTATTTGCGCTCAACTGGAGCCGAAGTTAAACCGAGCGCCGAGCTATTTAGCTG
GGTTACCTTGGCGGGGTATCGCATGTTCAATTGGGCTACACCCACCGGCCACCCCGACGAAAGCGGCTATTGGAGCAGCA
GCAACGCCCTGCTCAATACCTGGAACTTGTTATTCCACTTGCAGCAAAGCTACTTCCCGCCTGCAACCTTCGATTTGCAA
GGCCAAATGCCGGGCAGCGTCACCACCGTGCGCCAAATCGTCGATTTCTGGATTATGCGCATGCTTGGCTATCAACCTTC
AGCCTTGGTCAAAACCAAATTGCTCAAACTGATGGGCCAAAATGGCAATCTCGATCAACCACCAACTGGAACCGCCAATG
ACGTTAAATTACGCTTGAGCAGCCTTGTGCATATGATCGGCATGCTCCCTGAATTTTATACGCGCTAG

Upstream 100 bases:

>100_bases
TTAATTAACATCCTATTAATAAAACCTTGGTTAAAGGTCGTTAGACTAACGCCTATCATTTGGCCTTGGTTAATTTTTTT
AGCTCTTTTAAGGAGTCTGT

Downstream 100 bases:

>100_bases
GAGGCTGCAATGGATTTAACCCGTCGTCAATTTGTAGTTGGCTGTAGCAGCGCGATTGCAGCTATGGCTGGTGGTCGGCT
GGGTGGTTTGGCTTTTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MSLSRRQLLLGAALGATGAVVHEDVGAAPLQPSTTEAMATPPFEVIALSRMAYGARSGDFARVRSMGLTAYVDEQLNPNF
NNDTDCNTRIANATLRIVYAAGTGFPAMDEMRGLVTLNKTQPELWELRVHPANAERIRPIDEVVAANWIRAIYSKWQLFE
IMTDFWHNHFNVWAYSDTRISSLWPYYDKSVIRANCFGNFRSFLEAVATSPAMLYYLDNATSRDGPANENYARELFELHT
FGSQNYLNNIYDNWQEVPRDSQGRPIGYIDQDVYEAARAFTGWTVADGTGGIPNTGLFHYLDTWNDNAQKIVLANFLNAN
AGPQAHGKKVLDLVAQHPATIRNLCTKLCRRLVSDNPPSTLVDKAVATWTANYSAPDQIKKTIRTILLAPEFLSTWGGKI
RRPNEVVAAYLRSTGAEVKPSAELFSWVTLAGYRMFNWATPTGHPDESGYWSSSNALLNTWNLLFHLQQSYFPPATFDLQ
GQMPGSVTTVRQIVDFWIMRMLGYQPSALVKTKLLKLMGQNGNLDQPPTGTANDVKLRLSSLVHMIGMLPEFYTR

Sequences:

>Translated_555_residues
MSLSRRQLLLGAALGATGAVVHEDVGAAPLQPSTTEAMATPPFEVIALSRMAYGARSGDFARVRSMGLTAYVDEQLNPNF
NNDTDCNTRIANATLRIVYAAGTGFPAMDEMRGLVTLNKTQPELWELRVHPANAERIRPIDEVVAANWIRAIYSKWQLFE
IMTDFWHNHFNVWAYSDTRISSLWPYYDKSVIRANCFGNFRSFLEAVATSPAMLYYLDNATSRDGPANENYARELFELHT
FGSQNYLNNIYDNWQEVPRDSQGRPIGYIDQDVYEAARAFTGWTVADGTGGIPNTGLFHYLDTWNDNAQKIVLANFLNAN
AGPQAHGKKVLDLVAQHPATIRNLCTKLCRRLVSDNPPSTLVDKAVATWTANYSAPDQIKKTIRTILLAPEFLSTWGGKI
RRPNEVVAAYLRSTGAEVKPSAELFSWVTLAGYRMFNWATPTGHPDESGYWSSSNALLNTWNLLFHLQQSYFPPATFDLQ
GQMPGSVTTVRQIVDFWIMRMLGYQPSALVKTKLLKLMGQNGNLDQPPTGTANDVKLRLSSLVHMIGMLPEFYTR
>Mature_554_residues
SLSRRQLLLGAALGATGAVVHEDVGAAPLQPSTTEAMATPPFEVIALSRMAYGARSGDFARVRSMGLTAYVDEQLNPNFN
NDTDCNTRIANATLRIVYAAGTGFPAMDEMRGLVTLNKTQPELWELRVHPANAERIRPIDEVVAANWIRAIYSKWQLFEI
MTDFWHNHFNVWAYSDTRISSLWPYYDKSVIRANCFGNFRSFLEAVATSPAMLYYLDNATSRDGPANENYARELFELHTF
GSQNYLNNIYDNWQEVPRDSQGRPIGYIDQDVYEAARAFTGWTVADGTGGIPNTGLFHYLDTWNDNAQKIVLANFLNANA
GPQAHGKKVLDLVAQHPATIRNLCTKLCRRLVSDNPPSTLVDKAVATWTANYSAPDQIKKTIRTILLAPEFLSTWGGKIR
RPNEVVAAYLRSTGAEVKPSAELFSWVTLAGYRMFNWATPTGHPDESGYWSSSNALLNTWNLLFHLQQSYFPPATFDLQG
QMPGSVTTVRQIVDFWIMRMLGYQPSALVKTKLLKLMGQNGNLDQPPTGTANDVKLRLSSLVHMIGMLPEFYTR

Specific function: Unknown

COG id: COG5267

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62115; Mature: 61984

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSRRQLLLGAALGATGAVVHEDVGAAPLQPSTTEAMATPPFEVIALSRMAYGARSGDF
CCCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH
ARVRSMGLTAYVDEQLNPNFNNDTDCNTRIANATLRIVYAAGTGFPAMDEMRGLVTLNKT
HHHHHCCCCEEECCCCCCCCCCCCCCCCEEECEEEEEEEEECCCCCCHHHCCCCEEECCC
QPELWELRVHPANAERIRPIDEVVAANWIRAIYSKWQLFEIMTDFWHNHFNVWAYSDTRI
CCCEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCH
SSLWPYYDKSVIRANCFGNFRSFLEAVATSPAMLYYLDNATSRDGPANENYARELFELHT
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH
FGSQNYLNNIYDNWQEVPRDSQGRPIGYIDQDVYEAARAFTGWTVADGTGGIPNTGLFHY
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCHHHE
LDTWNDNAQKIVLANFLNANAGPQAHGKKVLDLVAQHPATIRNLCTKLCRRLVSDNPPST
ECCCCCCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHH
LVDKAVATWTANYSAPDQIKKTIRTILLAPEFLSTWGGKIRRPNEVVAAYLRSTGAEVKP
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
SAELFSWVTLAGYRMFNWATPTGHPDESGYWSSSNALLNTWNLLFHLQQSYFPPATFDLQ
HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEC
GQMPGSVTTVRQIVDFWIMRMLGYQPSALVKTKLLKLMGQNGNLDQPPTGTANDVKLRLS
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
SLVHMIGMLPEFYTR
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLSRRQLLLGAALGATGAVVHEDVGAAPLQPSTTEAMATPPFEVIALSRMAYGARSGDF
CCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH
ARVRSMGLTAYVDEQLNPNFNNDTDCNTRIANATLRIVYAAGTGFPAMDEMRGLVTLNKT
HHHHHCCCCEEECCCCCCCCCCCCCCCCEEECEEEEEEEEECCCCCCHHHCCCCEEECCC
QPELWELRVHPANAERIRPIDEVVAANWIRAIYSKWQLFEIMTDFWHNHFNVWAYSDTRI
CCCEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCH
SSLWPYYDKSVIRANCFGNFRSFLEAVATSPAMLYYLDNATSRDGPANENYARELFELHT
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH
FGSQNYLNNIYDNWQEVPRDSQGRPIGYIDQDVYEAARAFTGWTVADGTGGIPNTGLFHY
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCHHHE
LDTWNDNAQKIVLANFLNANAGPQAHGKKVLDLVAQHPATIRNLCTKLCRRLVSDNPPST
ECCCCCCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHH
LVDKAVATWTANYSAPDQIKKTIRTILLAPEFLSTWGGKIRRPNEVVAAYLRSTGAEVKP
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
SAELFSWVTLAGYRMFNWATPTGHPDESGYWSSSNALLNTWNLLFHLQQSYFPPATFDLQ
HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEC
GQMPGSVTTVRQIVDFWIMRMLGYQPSALVKTKLLKLMGQNGNLDQPPTGTANDVKLRLS
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
SLVHMIGMLPEFYTR
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA