Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899577
Identifier: 159899577
GI number: 159899577
Start: 3863914
End: 3865581
Strand: Direct
Name: 159899577
Synonym: Haur_3058
Alternate gene names: NA
Gene position: 3863914-3865581 (Clockwise)
Preceding gene: 159899575
Following gene: 159899578
Centisome position: 60.88
GC content: 52.4
Gene sequence:
>1668_bases ATGTCGCTGTCGCGTCGCCAGTTATTGTTGGGCGCTGCGCTAGGGGCCACAGGCGCAGTCGTTCATGAGGATGTTGGGGC AGCGCCGCTGCAACCCTCGACAACTGAAGCCATGGCAACTCCGCCATTCGAGGTCATCGCGCTCTCGCGCATGGCCTACG GAGCACGTTCGGGCGATTTCGCCCGAGTTCGTAGTATGGGTTTAACTGCCTATGTCGATGAGCAGCTTAACCCTAATTTC AACAACGACACCGATTGTAACACCCGTATCGCCAACGCCACCTTGCGCATTGTCTACGCCGCTGGCACGGGCTTTCCGGC CATGGATGAAATGCGTGGCCTTGTTACCCTCAACAAAACCCAGCCCGAATTATGGGAATTGCGCGTACATCCAGCCAACG CTGAGCGCATTCGCCCAATCGATGAAGTGGTAGCCGCCAATTGGATTCGCGCAATCTACAGTAAATGGCAACTATTCGAG ATTATGACCGATTTTTGGCATAATCACTTCAATGTCTGGGCCTATAGCGATACGCGCATCTCTTCGCTTTGGCCCTATTA CGACAAAAGCGTGATTCGCGCCAATTGTTTTGGTAACTTCCGCAGCTTTCTCGAAGCGGTGGCCACCAGCCCAGCCATGC TGTATTACCTTGATAATGCGACCAGCCGCGATGGCCCCGCCAACGAAAATTATGCCCGTGAACTATTTGAATTGCACACC TTTGGTTCGCAAAATTACCTCAATAATATCTACGACAACTGGCAAGAAGTACCGCGCGATTCGCAAGGCCGCCCAATCGG CTATATCGACCAAGATGTGTATGAGGCGGCCCGCGCCTTTACAGGCTGGACGGTGGCCGATGGCACAGGCGGCATTCCCA ACACGGGTTTATTCCATTATCTCGATACATGGAACGATAATGCCCAAAAGATTGTGCTGGCCAACTTCTTAAATGCCAAT GCTGGCCCCCAAGCTCATGGCAAAAAGGTTTTGGATCTTGTAGCCCAACATCCGGCCACAATTCGCAATCTTTGTACCAA ACTGTGTCGCCGTTTGGTCAGCGACAATCCACCAAGCACGCTGGTAGATAAAGCAGTCGCCACATGGACAGCCAACTATT CAGCCCCTGATCAGATTAAGAAAACCATTCGCACAATTTTGCTAGCTCCCGAATTTTTGAGCACATGGGGTGGCAAGATT CGCCGCCCGAATGAAGTTGTTGCCGCCTATTTGCGCTCAACTGGAGCCGAAGTTAAACCGAGCGCCGAGCTATTTAGCTG GGTTACCTTGGCGGGGTATCGCATGTTCAATTGGGCTACACCCACCGGCCACCCCGACGAAAGCGGCTATTGGAGCAGCA GCAACGCCCTGCTCAATACCTGGAACTTGTTATTCCACTTGCAGCAAAGCTACTTCCCGCCTGCAACCTTCGATTTGCAA GGCCAAATGCCGGGCAGCGTCACCACCGTGCGCCAAATCGTCGATTTCTGGATTATGCGCATGCTTGGCTATCAACCTTC AGCCTTGGTCAAAACCAAATTGCTCAAACTGATGGGCCAAAATGGCAATCTCGATCAACCACCAACTGGAACCGCCAATG ACGTTAAATTACGCTTGAGCAGCCTTGTGCATATGATCGGCATGCTCCCTGAATTTTATACGCGCTAG
Upstream 100 bases:
>100_bases TTAATTAACATCCTATTAATAAAACCTTGGTTAAAGGTCGTTAGACTAACGCCTATCATTTGGCCTTGGTTAATTTTTTT AGCTCTTTTAAGGAGTCTGT
Downstream 100 bases:
>100_bases GAGGCTGCAATGGATTTAACCCGTCGTCAATTTGTAGTTGGCTGTAGCAGCGCGATTGCAGCTATGGCTGGTGGTCGGCT GGGTGGTTTGGCTTTTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MSLSRRQLLLGAALGATGAVVHEDVGAAPLQPSTTEAMATPPFEVIALSRMAYGARSGDFARVRSMGLTAYVDEQLNPNF NNDTDCNTRIANATLRIVYAAGTGFPAMDEMRGLVTLNKTQPELWELRVHPANAERIRPIDEVVAANWIRAIYSKWQLFE IMTDFWHNHFNVWAYSDTRISSLWPYYDKSVIRANCFGNFRSFLEAVATSPAMLYYLDNATSRDGPANENYARELFELHT FGSQNYLNNIYDNWQEVPRDSQGRPIGYIDQDVYEAARAFTGWTVADGTGGIPNTGLFHYLDTWNDNAQKIVLANFLNAN AGPQAHGKKVLDLVAQHPATIRNLCTKLCRRLVSDNPPSTLVDKAVATWTANYSAPDQIKKTIRTILLAPEFLSTWGGKI RRPNEVVAAYLRSTGAEVKPSAELFSWVTLAGYRMFNWATPTGHPDESGYWSSSNALLNTWNLLFHLQQSYFPPATFDLQ GQMPGSVTTVRQIVDFWIMRMLGYQPSALVKTKLLKLMGQNGNLDQPPTGTANDVKLRLSSLVHMIGMLPEFYTR
Sequences:
>Translated_555_residues MSLSRRQLLLGAALGATGAVVHEDVGAAPLQPSTTEAMATPPFEVIALSRMAYGARSGDFARVRSMGLTAYVDEQLNPNF NNDTDCNTRIANATLRIVYAAGTGFPAMDEMRGLVTLNKTQPELWELRVHPANAERIRPIDEVVAANWIRAIYSKWQLFE IMTDFWHNHFNVWAYSDTRISSLWPYYDKSVIRANCFGNFRSFLEAVATSPAMLYYLDNATSRDGPANENYARELFELHT FGSQNYLNNIYDNWQEVPRDSQGRPIGYIDQDVYEAARAFTGWTVADGTGGIPNTGLFHYLDTWNDNAQKIVLANFLNAN AGPQAHGKKVLDLVAQHPATIRNLCTKLCRRLVSDNPPSTLVDKAVATWTANYSAPDQIKKTIRTILLAPEFLSTWGGKI RRPNEVVAAYLRSTGAEVKPSAELFSWVTLAGYRMFNWATPTGHPDESGYWSSSNALLNTWNLLFHLQQSYFPPATFDLQ GQMPGSVTTVRQIVDFWIMRMLGYQPSALVKTKLLKLMGQNGNLDQPPTGTANDVKLRLSSLVHMIGMLPEFYTR >Mature_554_residues SLSRRQLLLGAALGATGAVVHEDVGAAPLQPSTTEAMATPPFEVIALSRMAYGARSGDFARVRSMGLTAYVDEQLNPNFN NDTDCNTRIANATLRIVYAAGTGFPAMDEMRGLVTLNKTQPELWELRVHPANAERIRPIDEVVAANWIRAIYSKWQLFEI MTDFWHNHFNVWAYSDTRISSLWPYYDKSVIRANCFGNFRSFLEAVATSPAMLYYLDNATSRDGPANENYARELFELHTF GSQNYLNNIYDNWQEVPRDSQGRPIGYIDQDVYEAARAFTGWTVADGTGGIPNTGLFHYLDTWNDNAQKIVLANFLNANA GPQAHGKKVLDLVAQHPATIRNLCTKLCRRLVSDNPPSTLVDKAVATWTANYSAPDQIKKTIRTILLAPEFLSTWGGKIR RPNEVVAAYLRSTGAEVKPSAELFSWVTLAGYRMFNWATPTGHPDESGYWSSSNALLNTWNLLFHLQQSYFPPATFDLQG QMPGSVTTVRQIVDFWIMRMLGYQPSALVKTKLLKLMGQNGNLDQPPTGTANDVKLRLSSLVHMIGMLPEFYTR
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62115; Mature: 61984
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSRRQLLLGAALGATGAVVHEDVGAAPLQPSTTEAMATPPFEVIALSRMAYGARSGDF CCCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH ARVRSMGLTAYVDEQLNPNFNNDTDCNTRIANATLRIVYAAGTGFPAMDEMRGLVTLNKT HHHHHCCCCEEECCCCCCCCCCCCCCCCEEECEEEEEEEEECCCCCCHHHCCCCEEECCC QPELWELRVHPANAERIRPIDEVVAANWIRAIYSKWQLFEIMTDFWHNHFNVWAYSDTRI CCCEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCH SSLWPYYDKSVIRANCFGNFRSFLEAVATSPAMLYYLDNATSRDGPANENYARELFELHT HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH FGSQNYLNNIYDNWQEVPRDSQGRPIGYIDQDVYEAARAFTGWTVADGTGGIPNTGLFHY CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCHHHE LDTWNDNAQKIVLANFLNANAGPQAHGKKVLDLVAQHPATIRNLCTKLCRRLVSDNPPST ECCCCCCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHH LVDKAVATWTANYSAPDQIKKTIRTILLAPEFLSTWGGKIRRPNEVVAAYLRSTGAEVKP HHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC SAELFSWVTLAGYRMFNWATPTGHPDESGYWSSSNALLNTWNLLFHLQQSYFPPATFDLQ HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEC GQMPGSVTTVRQIVDFWIMRMLGYQPSALVKTKLLKLMGQNGNLDQPPTGTANDVKLRLS CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH SLVHMIGMLPEFYTR HHHHHHHHHHHHHCC >Mature Secondary Structure SLSRRQLLLGAALGATGAVVHEDVGAAPLQPSTTEAMATPPFEVIALSRMAYGARSGDF CCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH ARVRSMGLTAYVDEQLNPNFNNDTDCNTRIANATLRIVYAAGTGFPAMDEMRGLVTLNKT HHHHHCCCCEEECCCCCCCCCCCCCCCCEEECEEEEEEEEECCCCCCHHHCCCCEEECCC QPELWELRVHPANAERIRPIDEVVAANWIRAIYSKWQLFEIMTDFWHNHFNVWAYSDTRI CCCEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCH SSLWPYYDKSVIRANCFGNFRSFLEAVATSPAMLYYLDNATSRDGPANENYARELFELHT HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH FGSQNYLNNIYDNWQEVPRDSQGRPIGYIDQDVYEAARAFTGWTVADGTGGIPNTGLFHY CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCHHHE LDTWNDNAQKIVLANFLNANAGPQAHGKKVLDLVAQHPATIRNLCTKLCRRLVSDNPPST ECCCCCCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHH LVDKAVATWTANYSAPDQIKKTIRTILLAPEFLSTWGGKIRRPNEVVAAYLRSTGAEVKP HHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC SAELFSWVTLAGYRMFNWATPTGHPDESGYWSSSNALLNTWNLLFHLQQSYFPPATFDLQ HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEC GQMPGSVTTVRQIVDFWIMRMLGYQPSALVKTKLLKLMGQNGNLDQPPTGTANDVKLRLS CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH SLVHMIGMLPEFYTR HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA