The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159899378

Identifier: 159899378

GI number: 159899378

Start: 3631224

End: 3631598

Strand: Direct

Name: 159899378

Synonym: Haur_2859

Alternate gene names: NA

Gene position: 3631224-3631598 (Clockwise)

Preceding gene: 159899377

Following gene: 159899379

Centisome position: 57.22

GC content: 54.67

Gene sequence:

>375_bases
ATGAGTCAACCGCCACGTTTTGGCCGGATACCGCCAAACACAGCTCAATTGGTAGCGGGCCTTGCCCAAACCGTTGCAGG
CCAAGTTGTAACAGCCTTGCCTAACCATGCAGGCCATGCAACTCGCGCCGCAGCTACCGAAATTATTCTGGGGATTGTGT
TGCGCGACTGGCGCGAAAATGAAAACACTTCAGGTTTATTGCCTGATGATGTGGCCGACTTACGTTCATTTGTGCAGCTT
GCCGCCACGTTAGCCGGCAACGATCTTGAAAATCAGGGTGCGCCGGTTTTTCGGGCGGTGCTCACTGGCTTGATGGAAGA
TTGGCTGGCAAATTGGAATGCTCCAGGCGACCCTGGCGCACCTGGCCCATACTAA

Upstream 100 bases:

>100_bases
TTCACCGAACAACTAGCCGATGTGATTATTCGCGCAGTGCGCGAATTGGCCTAGCTCGTTGTTATGAGGAAACGCCTTTT
AGTGCTTCCGAGGAGGCTCA

Downstream 100 bases:

>100_bases
GCCCCCACTGGTGGATAAATCGCTTTTTTTGAGCTTCAAGGAGCATGCATGTCTGGTGATGAAATTATGACGTTGGTGGG
TCGGGTCGCTGCTTCGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSQPPRFGRIPPNTAQLVAGLAQTVAGQVVTALPNHAGHATRAAATEIILGIVLRDWRENENTSGLLPDDVADLRSFVQL
AATLAGNDLENQGAPVFRAVLTGLMEDWLANWNAPGDPGAPGPY

Sequences:

>Translated_124_residues
MSQPPRFGRIPPNTAQLVAGLAQTVAGQVVTALPNHAGHATRAAATEIILGIVLRDWRENENTSGLLPDDVADLRSFVQL
AATLAGNDLENQGAPVFRAVLTGLMEDWLANWNAPGDPGAPGPY
>Mature_123_residues
SQPPRFGRIPPNTAQLVAGLAQTVAGQVVTALPNHAGHATRAAATEIILGIVLRDWRENENTSGLLPDDVADLRSFVQLA
ATLAGNDLENQGAPVFRAVLTGLMEDWLANWNAPGDPGAPGPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13047; Mature: 12916

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPPRFGRIPPNTAQLVAGLAQTVAGQVVTALPNHAGHATRAAATEIILGIVLRDWREN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
ENTSGLLPDDVADLRSFVQLAATLAGNDLENQGAPVFRAVLTGLMEDWLANWNAPGDPGA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PGPY
CCCC
>Mature Secondary Structure 
SQPPRFGRIPPNTAQLVAGLAQTVAGQVVTALPNHAGHATRAAATEIILGIVLRDWREN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
ENTSGLLPDDVADLRSFVQLAATLAGNDLENQGAPVFRAVLTGLMEDWLANWNAPGDPGA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PGPY
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA