Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899379
Identifier: 159899379
GI number: 159899379
Start: 3631647
End: 3631871
Strand: Direct
Name: 159899379
Synonym: Haur_2860
Alternate gene names: NA
Gene position: 3631647-3631871 (Clockwise)
Preceding gene: 159899378
Following gene: 159899380
Centisome position: 57.22
GC content: 48.44
Gene sequence:
>225_bases ATGTCTGGTGATGAAATTATGACGTTGGTGGGTCGGGTCGCTGCTTCGGTTGGTTGGACGCTCGTCAGTGTCTTGATTTT CTACGGCGGCGCTCGGCTGTACGATTTGCTTGATCCAATTGATTATCGTGAAGAAATTAAACGTGGCAATGTGGCCGCAG CGATTCAATTAGCAGCAGTGACAATTGCCTTAGCCGCAATTGTTATCATGGCAGTGGCAACCTAA
Upstream 100 bases:
>100_bases GCTGGCAAATTGGAATGCTCCAGGCGACCCTGGCGCACCTGGCCCATACTAAGCCCCCACTGGTGGATAAATCGCTTTTT TTGAGCTTCAAGGAGCATGC
Downstream 100 bases:
>100_bases CATGGATACACAAACCCAACCATTTTGGCAACGCTTCGGCATCCATACGCTTAGTCTTGGCTTGGGTGGGGCTATTGCTA GCCTTGTATCGTTGTTGCTA
Product: membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MSGDEIMTLVGRVAASVGWTLVSVLIFYGGARLYDLLDPIDYREEIKRGNVAAAIQLAAVTIALAAIVIMAVAT
Sequences:
>Translated_74_residues MSGDEIMTLVGRVAASVGWTLVSVLIFYGGARLYDLLDPIDYREEIKRGNVAAAIQLAAVTIALAAIVIMAVAT >Mature_73_residues SGDEIMTLVGRVAASVGWTLVSVLIFYGGARLYDLLDPIDYREEIKRGNVAAAIQLAAVTIALAAIVIMAVAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7809; Mature: 7678
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDEIMTLVGRVAASVGWTLVSVLIFYGGARLYDLLDPIDYREEIKRGNVAAAIQLAAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHCCCHHHHHHHHHH TIALAAIVIMAVAT HHHHHHHHHHHHCC >Mature Secondary Structure SGDEIMTLVGRVAASVGWTLVSVLIFYGGARLYDLLDPIDYREEIKRGNVAAAIQLAAV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHCCCHHHHHHHHHH TIALAAIVIMAVAT HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA