Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899377
Identifier: 159899377
GI number: 159899377
Start: 3630149
End: 3631177
Strand: Direct
Name: 159899377
Synonym: Haur_2858
Alternate gene names: NA
Gene position: 3630149-3631177 (Clockwise)
Preceding gene: 159899376
Following gene: 159899378
Centisome position: 57.2
GC content: 52.38
Gene sequence:
>1029_bases ATGTACGTCGCGATTCTGCCACAACTGAGCGTCAGCAGTGAACTTGGCCAGAAGTGGGAAGCTTTAGTTCAAGCCAATCC CGCTGGTGGCGTGATGCAAAGCTTAGCTTGGGGTCAATTCAAACAACAACGCGGTTTGAATGTTGTGCATTTTGGCCTAT TTGCTGCTACTGATCAACTAATTGGTGGCATGCTCTGCACAATTCCAGCGCAGAGTGGGGTTGGCAGCAATTTGATCGCC GCCGATGGGCCAATTTTGCCCTGGCACGATCAAGCGCTTGCCCGCCAAGGGCTGCGTTTATTGCGCGAGGCGGCTGAGCA CCATGCCAGCGCTTATGGCGCGGTTGGTTTGCGGATCGAGCCACGGCTTGAACGTCCAGCATCCAATTTGCTACGCGATT GGCGACGTGCACCCGTCGATATGCTGGCCCGTGAAACCCTTTATTTGGATTTGCGGCCTTCCGCCGAGCAATTGTTGGCA GCCATGAAACCCAAAGGCCGCTATAACATTCGCTTAGCGGCGCGACGTGGTGTCACAGTGCGCATCTCGCATGATCTGGC TGATATTCCCTTGTTTTATCGCTTGATGGATGAAGCAGGCGAGCGCGACGATTTCTATGTTGAGCCAATCGACCATTTTA ATGATCTGTTGGCGACCTTGGCTCCGCTTGGTTATGCCCATTTGTTGTTTGCCGAGTATGCTGGCCAAACCTTAGGTACG TTATTGTTAATTACCTATGGTCAGCGGGCGGTGTATCAATATGGTGGCATTAGCAACCAATTGCGCGAGCAGATGGCGGG CTACGCCTTGCAATGGGCCGCCATTCAACAAGCCCAACGCTTGGGTTGCACCAGTTACGATTTTTATGGATTTGAACCAA CAGGCGATCCGCATCACCCATTTGCAGGCTTTTCGCGCTTCAAGCGAGCCTTTGGTGGGCAAGCAATTGCCTTGATTGGC GCATATGATTATTATTTCACCGAACAACTAGCCGATGTGATTATTCGCGCAGTGCGCGAATTGGCCTAG
Upstream 100 bases:
>100_bases TTGCCCGAACCCAACAGCTCATCCAAATCTTGAATGATCAACTAAGTTCGTTGCCCAAGCAAAACGACGCGGCCAAGAAG TTTTTACAGAGCTTGAAATA
Downstream 100 bases:
>100_bases CTCGTTGTTATGAGGAAACGCCTTTTAGTGCTTCCGAGGAGGCTCAATGAGTCAACCGCCACGTTTTGGCCGGATACCGC CAAACACAGCTCAATTGGTA
Product: methicillin resistance protein
Products: NA
Alternate protein names: FemAB Family Protein; FemA Protein; Protein FemA; FemA-Related Protein; Pentaglycine Interpeptide Bridge Formation Protein; Protein Involved In Methicillin Resistance
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MYVAILPQLSVSSELGQKWEALVQANPAGGVMQSLAWGQFKQQRGLNVVHFGLFAATDQLIGGMLCTIPAQSGVGSNLIA ADGPILPWHDQALARQGLRLLREAAEHHASAYGAVGLRIEPRLERPASNLLRDWRRAPVDMLARETLYLDLRPSAEQLLA AMKPKGRYNIRLAARRGVTVRISHDLADIPLFYRLMDEAGERDDFYVEPIDHFNDLLATLAPLGYAHLLFAEYAGQTLGT LLLITYGQRAVYQYGGISNQLREQMAGYALQWAAIQQAQRLGCTSYDFYGFEPTGDPHHPFAGFSRFKRAFGGQAIALIG AYDYYFTEQLADVIIRAVRELA
Sequences:
>Translated_342_residues MYVAILPQLSVSSELGQKWEALVQANPAGGVMQSLAWGQFKQQRGLNVVHFGLFAATDQLIGGMLCTIPAQSGVGSNLIA ADGPILPWHDQALARQGLRLLREAAEHHASAYGAVGLRIEPRLERPASNLLRDWRRAPVDMLARETLYLDLRPSAEQLLA AMKPKGRYNIRLAARRGVTVRISHDLADIPLFYRLMDEAGERDDFYVEPIDHFNDLLATLAPLGYAHLLFAEYAGQTLGT LLLITYGQRAVYQYGGISNQLREQMAGYALQWAAIQQAQRLGCTSYDFYGFEPTGDPHHPFAGFSRFKRAFGGQAIALIG AYDYYFTEQLADVIIRAVRELA >Mature_342_residues MYVAILPQLSVSSELGQKWEALVQANPAGGVMQSLAWGQFKQQRGLNVVHFGLFAATDQLIGGMLCTIPAQSGVGSNLIA ADGPILPWHDQALARQGLRLLREAAEHHASAYGAVGLRIEPRLERPASNLLRDWRRAPVDMLARETLYLDLRPSAEQLLA AMKPKGRYNIRLAARRGVTVRISHDLADIPLFYRLMDEAGERDDFYVEPIDHFNDLLATLAPLGYAHLLFAEYAGQTLGT LLLITYGQRAVYQYGGISNQLREQMAGYALQWAAIQQAQRLGCTSYDFYGFEPTGDPHHPFAGFSRFKRAFGGQAIALIG AYDYYFTEQLADVIIRAVRELA
Specific function: Unknown
COG id: COG2348
COG function: function code V; Uncharacterized protein involved in methicillin resistance
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37952; Mature: 37952
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVAILPQLSVSSELGQKWEALVQANPAGGVMQSLAWGQFKQQRGLNVVHFGLFAATDQL CEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH IGGMLCTIPAQSGVGSNLIAADGPILPWHDQALARQGLRLLREAAEHHASAYGAVGLRIE HCCEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEC PRLERPASNLLRDWRRAPVDMLARETLYLDLRPSAEQLLAAMKPKGRYNIRLAARRGVTV CCCCCCHHHHHHHHHHCCHHHHHHHHEEEECCCCHHHHHHHHCCCCCEEEEEEEECCEEE RISHDLADIPLFYRLMDEAGERDDFYVEPIDHFNDLLATLAPLGYAHLLFAEYAGQTLGT EECCCCHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLITYGQRAVYQYGGISNQLREQMAGYALQWAAIQQAQRLGCTSYDFYGFEPTGDPHHP HHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC FAGFSRFKRAFGGQAIALIGAYDYYFTEQLADVIIRAVRELA HHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MYVAILPQLSVSSELGQKWEALVQANPAGGVMQSLAWGQFKQQRGLNVVHFGLFAATDQL CEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH IGGMLCTIPAQSGVGSNLIAADGPILPWHDQALARQGLRLLREAAEHHASAYGAVGLRIE HCCEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEC PRLERPASNLLRDWRRAPVDMLARETLYLDLRPSAEQLLAAMKPKGRYNIRLAARRGVTV CCCCCCHHHHHHHHHHCCHHHHHHHHEEEECCCCHHHHHHHHCCCCCEEEEEEEECCEEE RISHDLADIPLFYRLMDEAGERDDFYVEPIDHFNDLLATLAPLGYAHLLFAEYAGQTLGT EECCCCHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLITYGQRAVYQYGGISNQLREQMAGYALQWAAIQQAQRLGCTSYDFYGFEPTGDPHHP HHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC FAGFSRFKRAFGGQAIALIGAYDYYFTEQLADVIIRAVRELA HHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA