| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898366
Identifier: 159898366
GI number: 159898366
Start: 2142600
End: 2143403
Strand: Reverse
Name: 159898366
Synonym: Haur_1842
Alternate gene names: NA
Gene position: 2143403-2142600 (Counterclockwise)
Preceding gene: 159898367
Following gene: 159898365
Centisome position: 33.77
GC content: 52.49
Gene sequence:
>804_bases ATGAAACAATACATTCCAACTCACGATATTGTACTGATAACCTTAGATACTCTGCGCTACGACGTGGCGGTAGCTGAGTG GACGAATGGCGGCACGCCCAATTTGCGGGCACTGTTGCCGCATGGCTGGCAAGAACGCCATAGCCCAGGCTCCTTCACCT ATGCTGCCCATCAAGCGATGTTTGCTGGTTTTATGCCTACGCCTGCCACACCTGGCCCGCATGGCCGCTTGTTTGCAGCC CGTTTTGCTGGCAGCGAAACCACGACCGAGCAAACGTTTACCTTTGATGCTCCAGAAATTGTTACGGGCTTGGCGCAGGT CGGCTATCGCACCATTTGTATAGGCGGCGTGGGCTTTTTCAATCGCCAAACTGCATTAAGCTGTGTGCTGCCTGATTTAT TCCATGAATCCTATTGGGAGCCACGTTTGGGCGTGACCGAGCCGCGTTCGACCGAATTTCAAGTGGCTTTGGCAGTCGAA CGTTTGCAGGCAATTCCAGCCGAGCAACGAATCTTCTTGTTTATCAATATTTCAGCCTTGCATCAACCCAATTGCCACTA TTTGGCTGGCGCGACAGGCGATAGTTTAGCCAGCCATGCGGCGGCTTTACGCTATGTTGATCGTCAGTTACCAGCCTTAT TTGCTGCGTTACGGCAGCGCAACCCAAGCTTTTTAATGATCTGTTCCGATCATGGCACAGCCTATGGCGAAGATGGTTTT TCGGGGCATCGCCTAGCTCATCCCACGGTTTGGACTGTGCCCTATGCTGATTGCAGTTTGGAGGAAGCCCATGCATCTGC GTGA
Upstream 100 bases:
>100_bases AATAGTGGGGGCTGGTAGTTGGTGGTCGGGGATCAGGTAAGTCTCTTGCCTAGCATATTCCCGATCCTCAACCACCGATC CCCAACCACCAGAGATTCTA
Downstream 100 bases:
>100_bases ATATGCCAATGCTACGCCTTACATGGGCTATAGCTATAGTTACCCACATAAATCGGCCTATCGCCAGCTTGAGCCACGTT CATTACGCGAGGTTTGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Methyltransferase Type
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKQYIPTHDIVLITLDTLRYDVAVAEWTNGGTPNLRALLPHGWQERHSPGSFTYAAHQAMFAGFMPTPATPGPHGRLFAA RFAGSETTTEQTFTFDAPEIVTGLAQVGYRTICIGGVGFFNRQTALSCVLPDLFHESYWEPRLGVTEPRSTEFQVALAVE RLQAIPAEQRIFLFINISALHQPNCHYLAGATGDSLASHAAALRYVDRQLPALFAALRQRNPSFLMICSDHGTAYGEDGF SGHRLAHPTVWTVPYADCSLEEAHASA
Sequences:
>Translated_267_residues MKQYIPTHDIVLITLDTLRYDVAVAEWTNGGTPNLRALLPHGWQERHSPGSFTYAAHQAMFAGFMPTPATPGPHGRLFAA RFAGSETTTEQTFTFDAPEIVTGLAQVGYRTICIGGVGFFNRQTALSCVLPDLFHESYWEPRLGVTEPRSTEFQVALAVE RLQAIPAEQRIFLFINISALHQPNCHYLAGATGDSLASHAAALRYVDRQLPALFAALRQRNPSFLMICSDHGTAYGEDGF SGHRLAHPTVWTVPYADCSLEEAHASA >Mature_267_residues MKQYIPTHDIVLITLDTLRYDVAVAEWTNGGTPNLRALLPHGWQERHSPGSFTYAAHQAMFAGFMPTPATPGPHGRLFAA RFAGSETTTEQTFTFDAPEIVTGLAQVGYRTICIGGVGFFNRQTALSCVLPDLFHESYWEPRLGVTEPRSTEFQVALAVE RLQAIPAEQRIFLFINISALHQPNCHYLAGATGDSLASHAAALRYVDRQLPALFAALRQRNPSFLMICSDHGTAYGEDGF SGHRLAHPTVWTVPYADCSLEEAHASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29329; Mature: 29329
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQYIPTHDIVLITLDTLRYDVAVAEWTNGGTPNLRALLPHGWQERHSPGSFTYAAHQAM CCCCCCCCCEEEEEEECCEEEEEEEEECCCCCCCEEEECCCCCHHHCCCCCEEHHHHHHH FAGFMPTPATPGPHGRLFAARFAGSETTTEQTFTFDAPEIVTGLAQVGYRTICIGGVGFF HHCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHCCEEEEEEECCCCC NRQTALSCVLPDLFHESYWEPRLGVTEPRSTEFQVALAVERLQAIPAEQRIFLFINISAL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEEEEEE HQPNCHYLAGATGDSLASHAAALRYVDRQLPALFAALRQRNPSFLMICSDHGTAYGEDGF CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC SGHRLAHPTVWTVPYADCSLEEAHASA CCCEECCCEEEEECCCCCCCHHHCCCC >Mature Secondary Structure MKQYIPTHDIVLITLDTLRYDVAVAEWTNGGTPNLRALLPHGWQERHSPGSFTYAAHQAM CCCCCCCCCEEEEEEECCEEEEEEEEECCCCCCCEEEECCCCCHHHCCCCCEEHHHHHHH FAGFMPTPATPGPHGRLFAARFAGSETTTEQTFTFDAPEIVTGLAQVGYRTICIGGVGFF HHCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHCCEEEEEEECCCCC NRQTALSCVLPDLFHESYWEPRLGVTEPRSTEFQVALAVERLQAIPAEQRIFLFINISAL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEEEEEE HQPNCHYLAGATGDSLASHAAALRYVDRQLPALFAALRQRNPSFLMICSDHGTAYGEDGF CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC SGHRLAHPTVWTVPYADCSLEEAHASA CCCEECCCEEEEECCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA