| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898367
Identifier: 159898367
GI number: 159898367
Start: 2143464
End: 2144597
Strand: Reverse
Name: 159898367
Synonym: Haur_1843
Alternate gene names: NA
Gene position: 2144597-2143464 (Counterclockwise)
Preceding gene: 159898368
Following gene: 159898366
Centisome position: 33.79
GC content: 53.35
Gene sequence:
>1134_bases GTGATCGTTATTGGTAATCCACATGATCGGCGAGTTGCACTGTGGCAGGCGGCCTTGGCCCGTCAAGGCCAGCCGCCAGC TTGCGTCATTAGCTATTACGATCTGTTGGCAGGCCAACACGATTTGGCTGAGTTGATCAAATCTAGTGAGCTAGTGCGGA TTGAATCGCCTGGCAAGGATGAGCAACTGTATCGTGAACTGGTACGGTTCGCTGCTGAACTAACGCCTGAACCAGAGTTT GAGCATTGGCCGATCGATGCAAATTTGCCGCAAGAGCGCGGGCGCTTGTGGGGTAGTCGCCAATGGTATCGCGGCTACAC CCGCTTACTAAGCCAACTTGGGCAACAATTAGCTAGCTTAAATGTACGCTTGTTGCAGCACCCTGCCGATATCAGCGTGA TGTTCGATAAAGTGGCCTGCCATGCGCGATTGGCGCAAGCCGATGTGCTTGTGCCACGCAGTTTGCCAGCGATTGGCTCG TTTGAACAATTGCAAACAGCACTACAAACTCATGGCTGGCAACGGGTTTTTATCAAACTGGCGCATGGCTCAAGCGCGGC GGGCGTGGTGGCGTATCGCACTAATGGCCGCCAAATGCAGGCAATTACCACGGTTGAGTTGGTCGAAACCAGCGCTGGCT TGCAATTGTACAACTCACGCAATTTGCGCACCTACACCCATCTGCGCGAAATTCAACCATTAATTGATGCCTTGGCCCAA CAACGAGTCCATGTTGAAGAATGGGTTCCCAAGGCGCGGCTGGCGGGCAAGGTCTACGATTTGCGCATGTTGGTGATTGC GGGCAAAGCGCAACATACGGTTGTGCGCACCAGCACTTCGCCAATCACCAACCTGCATCTATTGAATCCACGCGGCGATT TGGCGGCAGTTCAAGCCCAGTTAGGAGCCGAATTTTGGCAGATTGTGCGGCAACAGGCCGAAGCGGCTAGCGCCTGTTTT GAGCGCTCGCTTTACGCTGGGGTTGATTTGCTGATCGCCAATAGCCTGCAACATTGTTTGGTTGGCGAAGTTAATGCCTT TGGCGATTTGCTACCAAATGTCTTGGTCGATGGACTCGATAGTTATGAGGCTGAAATAGTGGGGGCTGGTAGTTGGTGGT CGGGGATCAGGTAA
Upstream 100 bases:
>100_bases ATGCAATCGCCCAGCAATTCAAACAATTGGGGATTGAAGTCGATATTTCCGAGCCACAAGACCCCCATCGCTACGATCGA CGCTATATCGCGGTGAGTGA
Downstream 100 bases:
>100_bases GTCTCTTGCCTAGCATATTCCCGATCCTCAACCACCGATCCCCAACCACCAGAGATTCTAATGAAACAATACATTCCAAC TCACGATATTGTACTGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MIVIGNPHDRRVALWQAALARQGQPPACVISYYDLLAGQHDLAELIKSSELVRIESPGKDEQLYRELVRFAAELTPEPEF EHWPIDANLPQERGRLWGSRQWYRGYTRLLSQLGQQLASLNVRLLQHPADISVMFDKVACHARLAQADVLVPRSLPAIGS FEQLQTALQTHGWQRVFIKLAHGSSAAGVVAYRTNGRQMQAITTVELVETSAGLQLYNSRNLRTYTHLREIQPLIDALAQ QRVHVEEWVPKARLAGKVYDLRMLVIAGKAQHTVVRTSTSPITNLHLLNPRGDLAAVQAQLGAEFWQIVRQQAEAASACF ERSLYAGVDLLIANSLQHCLVGEVNAFGDLLPNVLVDGLDSYEAEIVGAGSWWSGIR
Sequences:
>Translated_377_residues MIVIGNPHDRRVALWQAALARQGQPPACVISYYDLLAGQHDLAELIKSSELVRIESPGKDEQLYRELVRFAAELTPEPEF EHWPIDANLPQERGRLWGSRQWYRGYTRLLSQLGQQLASLNVRLLQHPADISVMFDKVACHARLAQADVLVPRSLPAIGS FEQLQTALQTHGWQRVFIKLAHGSSAAGVVAYRTNGRQMQAITTVELVETSAGLQLYNSRNLRTYTHLREIQPLIDALAQ QRVHVEEWVPKARLAGKVYDLRMLVIAGKAQHTVVRTSTSPITNLHLLNPRGDLAAVQAQLGAEFWQIVRQQAEAASACF ERSLYAGVDLLIANSLQHCLVGEVNAFGDLLPNVLVDGLDSYEAEIVGAGSWWSGIR >Mature_377_residues MIVIGNPHDRRVALWQAALARQGQPPACVISYYDLLAGQHDLAELIKSSELVRIESPGKDEQLYRELVRFAAELTPEPEF EHWPIDANLPQERGRLWGSRQWYRGYTRLLSQLGQQLASLNVRLLQHPADISVMFDKVACHARLAQADVLVPRSLPAIGS FEQLQTALQTHGWQRVFIKLAHGSSAAGVVAYRTNGRQMQAITTVELVETSAGLQLYNSRNLRTYTHLREIQPLIDALAQ QRVHVEEWVPKARLAGKVYDLRMLVIAGKAQHTVVRTSTSPITNLHLLNPRGDLAAVQAQLGAEFWQIVRQQAEAASACF ERSLYAGVDLLIANSLQHCLVGEVNAFGDLLPNVLVDGLDSYEAEIVGAGSWWSGIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41982; Mature: 41982
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVIGNPHDRRVALWQAALARQGQPPACVISYYDLLAGQHDLAELIKSSELVRIESPGKD CEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCH EQLYRELVRFAAELTPEPEFEHWPIDANLPQERGRLWGSRQWYRGYTRLLSQLGQQLASL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC NVRLLQHPADISVMFDKVACHARLAQADVLVPRSLPAIGSFEQLQTALQTHGWQRVFIKL CHHEECCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEE AHGSSAAGVVAYRTNGRQMQAITTVELVETSAGLQLYNSRNLRTYTHLREIQPLIDALAQ ECCCCCCEEEEEECCCCEEEHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH QRVHVEEWVPKARLAGKVYDLRMLVIAGKAQHTVVRTSTSPITNLHLLNPRGDLAAVQAQ CCCCHHHHCCHHHHCCHHHEEEEEEEECCCCCEEEEECCCCCCEEEEECCCCCHHHHHHH LGAEFWQIVRQQAEAASACFERSLYAGVDLLIANSLQHCLVGEVNAFGDLLPNVLVDGLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC SYEAEIVGAGSWWSGIR CCCEEEEECCCCCCCCC >Mature Secondary Structure MIVIGNPHDRRVALWQAALARQGQPPACVISYYDLLAGQHDLAELIKSSELVRIESPGKD CEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCH EQLYRELVRFAAELTPEPEFEHWPIDANLPQERGRLWGSRQWYRGYTRLLSQLGQQLASL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC NVRLLQHPADISVMFDKVACHARLAQADVLVPRSLPAIGSFEQLQTALQTHGWQRVFIKL CHHEECCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEE AHGSSAAGVVAYRTNGRQMQAITTVELVETSAGLQLYNSRNLRTYTHLREIQPLIDALAQ ECCCCCCEEEEEECCCCEEEHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH QRVHVEEWVPKARLAGKVYDLRMLVIAGKAQHTVVRTSTSPITNLHLLNPRGDLAAVQAQ CCCCHHHHCCHHHHCCHHHEEEEEEEECCCCCEEEEECCCCCCEEEEECCCCCHHHHHHH LGAEFWQIVRQQAEAASACFERSLYAGVDLLIANSLQHCLVGEVNAFGDLLPNVLVDGLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC SYEAEIVGAGSWWSGIR CCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA