| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898241
Identifier: 159898241
GI number: 159898241
Start: 1998599
End: 1999903
Strand: Reverse
Name: 159898241
Synonym: Haur_1717
Alternate gene names: NA
Gene position: 1999903-1998599 (Counterclockwise)
Preceding gene: 159898242
Following gene: 159898239
Centisome position: 31.51
GC content: 50.96
Gene sequence:
>1305_bases ATGACTGATGCCAATCAACCGCTGCACGACGAACCCTTACCCGAATTTGATTTGCCTGACCCCAAAGATGCGATGCCGCA TGAAGATACGCTCAGCGAGGAAGGCACGCGCGGGGTCGTGCCTGTTGACCAGTTTTTGTATGTCGGTCAGGGTCTGAAAG CCGATGAATTTACCCATTACGTCGATACCTATAACTTTGGGGCTGTGCCACCTAACTTTGTGGTGTTGCACCATACCGCT GTACCAAGTACTGCCGCTGCTCCTTACCCCTCAGGCTGGCGCTGGGATAACCAAGAAACTGGTTTGAGCGAAGGCCAAAT TTACCGCAAACGCCTCAAACAGCTCGAAACCCTGCGCGAATACTATCGCACCAGCGCTGGCTGGGATCGTGGCCCACACT TATTTATCGATGAAACCTGGATTTGGTTGTTCACGCCGATGTACGATCAAGGGATTCACGCCGCTCAAGGTAATGGCTAT CGCGATAGTAAAGGTACATTGCAATATTCAATCGGCATCGAAGTATGTGGCTATTTTGAAAAAACCCAGTGGTCGGCTCC CGTTGCAGCCCTGGTTGGCCATGCGGTGGCAGTGCTCAAACGCAAATTAAACAGCTTTGAGATTCGCTATCAGAAATTTG GTGGTGGCATTTCATCGCACCGCGATTACAATAAACCTTCATGTCCAGGCGCAGCGATCACCGAATCCTATTACATCAGT ACAATTCAAAATGCCTTTGATCGTTTGAGTAATGTTCAAAGCACGCCAATTGCTGATAATCCAATTACTACCAATACCCC ATTGTTGAGCGCAACGCCCTCAGGCAGCCGCGAAAAGGCAATCGCCTTTATTCGTAAGAGCCTGCCCGATAATTCCGAAT ATAAGAACGATATTGAAACGATTATGGGGTATTACTGGGTCTATGCCCCCAGCGTTGGGCTTGATCCCTTCCTCGCTGCA TCGCAATGTATTTTTGAAACCGCTGGCTTGACTTCAGGCTGGGCTGCGCGGCCAAAACGTAATCCGGCTGGTTTGGGCGT GCGCCAAGAGGGCGGCCTTTCGTTCAGCACCTGGGATGGCGCAGTCCAAGCGCATATTGGGCAATTATTGGCCTTGGCCT TGCGTGATGATGAGGCTAATCAAGCCCAAAAAACCATGATGGCTGCCAATCCACGCCATGGCAACATTCCAGCCAATCTG CGTGGGGTTGCCAAAACGTTGGCTGGCTTGAGCAATAATTGGACTGACGATGCCGATTATGCCAACAAGTTTGCGACTCG CGCCGAGGCAATTCGCAAGGGCTAG
Upstream 100 bases:
>100_bases GGCTCGAATTGGCTAGGGCGATAATCGTACCTAGCCAACCTCTAAGCTTGAATTGTATAATTGGGCTGTTCTCGGTGTTT TGTGCGAAGGAGATCAATCA
Downstream 100 bases:
>100_bases CTTTCAGGCGTAGGATATAACGCCCATCACCCCGACATCACTCGACGGCGGCGGGCATCACTCCTAGAGCGGTTCCCCCT CGCCCGCACGCGAGGCGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MTDANQPLHDEPLPEFDLPDPKDAMPHEDTLSEEGTRGVVPVDQFLYVGQGLKADEFTHYVDTYNFGAVPPNFVVLHHTA VPSTAAAPYPSGWRWDNQETGLSEGQIYRKRLKQLETLREYYRTSAGWDRGPHLFIDETWIWLFTPMYDQGIHAAQGNGY RDSKGTLQYSIGIEVCGYFEKTQWSAPVAALVGHAVAVLKRKLNSFEIRYQKFGGGISSHRDYNKPSCPGAAITESYYIS TIQNAFDRLSNVQSTPIADNPITTNTPLLSATPSGSREKAIAFIRKSLPDNSEYKNDIETIMGYYWVYAPSVGLDPFLAA SQCIFETAGLTSGWAARPKRNPAGLGVRQEGGLSFSTWDGAVQAHIGQLLALALRDDEANQAQKTMMAANPRHGNIPANL RGVAKTLAGLSNNWTDDADYANKFATRAEAIRKG
Sequences:
>Translated_434_residues MTDANQPLHDEPLPEFDLPDPKDAMPHEDTLSEEGTRGVVPVDQFLYVGQGLKADEFTHYVDTYNFGAVPPNFVVLHHTA VPSTAAAPYPSGWRWDNQETGLSEGQIYRKRLKQLETLREYYRTSAGWDRGPHLFIDETWIWLFTPMYDQGIHAAQGNGY RDSKGTLQYSIGIEVCGYFEKTQWSAPVAALVGHAVAVLKRKLNSFEIRYQKFGGGISSHRDYNKPSCPGAAITESYYIS TIQNAFDRLSNVQSTPIADNPITTNTPLLSATPSGSREKAIAFIRKSLPDNSEYKNDIETIMGYYWVYAPSVGLDPFLAA SQCIFETAGLTSGWAARPKRNPAGLGVRQEGGLSFSTWDGAVQAHIGQLLALALRDDEANQAQKTMMAANPRHGNIPANL RGVAKTLAGLSNNWTDDADYANKFATRAEAIRKG >Mature_433_residues TDANQPLHDEPLPEFDLPDPKDAMPHEDTLSEEGTRGVVPVDQFLYVGQGLKADEFTHYVDTYNFGAVPPNFVVLHHTAV PSTAAAPYPSGWRWDNQETGLSEGQIYRKRLKQLETLREYYRTSAGWDRGPHLFIDETWIWLFTPMYDQGIHAAQGNGYR DSKGTLQYSIGIEVCGYFEKTQWSAPVAALVGHAVAVLKRKLNSFEIRYQKFGGGISSHRDYNKPSCPGAAITESYYIST IQNAFDRLSNVQSTPIADNPITTNTPLLSATPSGSREKAIAFIRKSLPDNSEYKNDIETIMGYYWVYAPSVGLDPFLAAS QCIFETAGLTSGWAARPKRNPAGLGVRQEGGLSFSTWDGAVQAHIGQLLALALRDDEANQAQKTMMAANPRHGNIPANLR GVAKTLAGLSNNWTDDADYANKFATRAEAIRKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47930; Mature: 47799
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDANQPLHDEPLPEFDLPDPKDAMPHEDTLSEEGTRGVVPVDQFLYVGQGLKADEFTHY CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHH VDTYNFGAVPPNFVVLHHTAVPSTAAAPYPSGWRWDNQETGLSEGQIYRKRLKQLETLRE HHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH YYRTSAGWDRGPHLFIDETWIWLFTPMYDQGIHAAQGNGYRDSKGTLQYSIGIEVCGYFE HHHHCCCCCCCCEEEEECCEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEECEEEECCHH KTQWSAPVAALVGHAVAVLKRKLNSFEIRYQKFGGGISSHRDYNKPSCPGAAITESYYIS HCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH TIQNAFDRLSNVQSTPIADNPITTNTPLLSATPSGSREKAIAFIRKSLPDNSEYKNDIET HHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHH IMGYYWVYAPSVGLDPFLAASQCIFETAGLTSGWAARPKRNPAGLGVRQEGGLSFSTWDG HHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCH AVQAHIGQLLALALRDDEANQAQKTMMAANPRHGNIPANLRGVAKTLAGLSNNWTDDADY HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH ANKFATRAEAIRKG HHHHHHHHHHHHCC >Mature Secondary Structure TDANQPLHDEPLPEFDLPDPKDAMPHEDTLSEEGTRGVVPVDQFLYVGQGLKADEFTHY CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHH VDTYNFGAVPPNFVVLHHTAVPSTAAAPYPSGWRWDNQETGLSEGQIYRKRLKQLETLRE HHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH YYRTSAGWDRGPHLFIDETWIWLFTPMYDQGIHAAQGNGYRDSKGTLQYSIGIEVCGYFE HHHHCCCCCCCCEEEEECCEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEECEEEECCHH KTQWSAPVAALVGHAVAVLKRKLNSFEIRYQKFGGGISSHRDYNKPSCPGAAITESYYIS HCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH TIQNAFDRLSNVQSTPIADNPITTNTPLLSATPSGSREKAIAFIRKSLPDNSEYKNDIET HHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHH IMGYYWVYAPSVGLDPFLAASQCIFETAGLTSGWAARPKRNPAGLGVRQEGGLSFSTWDG HHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCH AVQAHIGQLLALALRDDEANQAQKTMMAANPRHGNIPANLRGVAKTLAGLSNNWTDDADY HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH ANKFATRAEAIRKG HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA