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The map label for this gene is ybbI [C]

Identifier: 159898239

GI number: 159898239

Start: 1995145

End: 1995879

Strand: Reverse

Name: ybbI [C]

Synonym: Haur_1715

Alternate gene names: 159898239

Gene position: 1995879-1995145 (Counterclockwise)

Preceding gene: 159898241

Following gene: 159898238

Centisome position: 31.45

GC content: 49.52

Gene sequence:

>735_bases
ATGAATGTTGGGCGTTATTTCCGCACCGTTGACTTAGCTAAAGCAATTAATGTGAGCGTGCAACAAGTGCGCAATTATCA
AGCTGAGGGCTTTTTGCCCAACGTCGAACGCGGCTCCAACGGCTACCGTCAATATACCCAACAGCATATTGATGCGATTA
AAACTGCCCATCAACTTATCAAGGGGTATGGTTGGCGGAATGCTCAGCAGATTATGGCGGCATTGCATCAGGCCAATCAT
CAAACAGCGTTTAATCTGATCAACCAACATCATGCCAAGCTGGATAGCATTCGCCAGCAGCTTGACCAAACCCTGACCTT
GCTCAAAGCCGTGGCCGATCAATTACCACCAAGCCCGCGCCATAGCCAGCGTATCTTGGTTGGTGAGGCTGCCAAAGCCG
TGGGCGTGCCCATCTCGGCCTTGCGCTTTTGGGAGCAACAAGGCCTTTTGCAGCCAATTCGCCAAGCCTCGAACAACTAT
CGCTATTATGATGAACGCCAATTGCGTCGCCTACGAATTATCGTTTTATTACGTCAAGCTAATGCTGATTTTAGCTCAAT
TCGCACAACCTTAGAAACGCTTGATCAACAACAACCGCAACGGGCCGTTGCTGCAATCGAACAGCGCCGCGTCGCTTTGG
CCCAACAAAGCTGGGAATGTTTACAAGCAACCACGGCGTTGGTGAGCTATATTCAAACCTATGTGCCGCTGCAACCAATC
CCAATTATTGAGTAA

Upstream 100 bases:

>100_bases
CTAGAACATAGATGCAAGTGTAGGGAGTTTTCGCTTGGTAAATATCCTTTCGACACTCAAATTGCTGATCAAAGTCTCAA
TTTTTACATGAGGGTTTAAC

Downstream 100 bases:

>100_bases
ATAACTGCAAATTATCAAGTTAATTATAACACAAATGTTCTAAATATTTCATCTTTATAACTGAATTAGCGCAATTTTGA
TGAAATTGAATGCAGCGTGC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; MerR-Family Transcriptional Regulator; Transcriptional Regulator; MerR-Family Transcriptional Regulatory Protein; MarR Family Transcriptional Regulator; Regulatory Protein MerR; LOW QUALITY PROTEIN MerR-Family Transcriptional Regulator

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MNVGRYFRTVDLAKAINVSVQQVRNYQAEGFLPNVERGSNGYRQYTQQHIDAIKTAHQLIKGYGWRNAQQIMAALHQANH
QTAFNLINQHHAKLDSIRQQLDQTLTLLKAVADQLPPSPRHSQRILVGEAAKAVGVPISALRFWEQQGLLQPIRQASNNY
RYYDERQLRRLRIIVLLRQANADFSSIRTTLETLDQQQPQRAVAAIEQRRVALAQQSWECLQATTALVSYIQTYVPLQPI
PIIE

Sequences:

>Translated_244_residues
MNVGRYFRTVDLAKAINVSVQQVRNYQAEGFLPNVERGSNGYRQYTQQHIDAIKTAHQLIKGYGWRNAQQIMAALHQANH
QTAFNLINQHHAKLDSIRQQLDQTLTLLKAVADQLPPSPRHSQRILVGEAAKAVGVPISALRFWEQQGLLQPIRQASNNY
RYYDERQLRRLRIIVLLRQANADFSSIRTTLETLDQQQPQRAVAAIEQRRVALAQQSWECLQATTALVSYIQTYVPLQPI
PIIE
>Mature_244_residues
MNVGRYFRTVDLAKAINVSVQQVRNYQAEGFLPNVERGSNGYRQYTQQHIDAIKTAHQLIKGYGWRNAQQIMAALHQANH
QTAFNLINQHHAKLDSIRQQLDQTLTLLKAVADQLPPSPRHSQRILVGEAAKAVGVPISALRFWEQQGLLQPIRQASNNY
RYYDERQLRRLRIIVLLRQANADFSSIRTTLETLDQQQPQRAVAAIEQRRVALAQQSWECLQATTALVSYIQTYVPLQPI
PIIE

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27927; Mature: 27927

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVGRYFRTVDLAKAINVSVQQVRNYQAEGFLPNVERGSNGYRQYTQQHIDAIKTAHQLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KGYGWRNAQQIMAALHQANHQTAFNLINQHHAKLDSIRQQLDQTLTLLKAVADQLPPSPR
HCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HSQRILVGEAAKAVGVPISALRFWEQQGLLQPIRQASNNYRYYDERQLRRLRIIVLLRQA
CCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
NADFSSIRTTLETLDQQQPQRAVAAIEQRRVALAQQSWECLQATTALVSYIQTYVPLQPI
CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PIIE
CCCC
>Mature Secondary Structure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CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA