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The map label for this gene is ubiA [H]

Identifier: 159898242

GI number: 159898242

Start: 2000003

End: 2000869

Strand: Reverse

Name: ubiA [H]

Synonym: Haur_1718

Alternate gene names: 159898242

Gene position: 2000869-2000003 (Counterclockwise)

Preceding gene: 159898244

Following gene: 159898241

Centisome position: 31.53

GC content: 48.21

Gene sequence:

>867_bases
ATGACAAGTTTACGCCAAACCTTGCACCAAACCGCGATCAATATCAAGGTAGAACACACGGTTTTTGCCCTACCCTTCGC
CTATTTGGGTCTGTTTTTAGCCAATAAACAATTCCCTGGTTGGCAACCGCTGATCTTAGTGACTTTAGCGATGGTGGCGG
CACGCACCGCCGCGATGTCCTTTAATCGCTATCTCGATCGCCATTTTGATGCGCGTAATCCGCGCACCAGCATTCGGCCA
ATTCCTGCTGGGACACTTTCAGCCACATCAGTCTTGATCGTTGGTTTAGTTTCGTTGGCGGTTTTAGTGATTTCGGCTGG
GTTGCTCAACCCATTGTGTTTGCTACTCTCGCCAATTGCGTTAATTGCCCTGACAGGTTATTCCTACATGAAGCGCTTTA
CGTGGTTGTGCCACTTTGGTTTAGGCTTTACTGATGCCATTGCGCCTGCTGGCGGTTGGCTGGCCGTTGATCCCAATTTT
CGGCTTTCGATGATTTTATTAGCAGCAGCAGTCGGCATTTGGATTGCCGGCTTTGATTTAATTTACGCCTGCCAAGATGT
TGACTTTGATCGCAAGGAAGGTTTACACTCATTGCCTGCTCGTTTTAGCATTGCCACCTCGCTGCGTGTCGCCAAAATTT
GCCATATTGCGATGATTGGTTTGTTGCTGGCGGTGGGAGTTTCGTTAAGCCTAAGTTGGCCGTTTTACGTTGGGGTTGCG
GCGGCAGCAGGCTTGTTGGTCTACGAACACAGCTTAATCAACCCCCGCGATCTTTCCAAAATTGATATTGCCTTTTTCAA
TGTGAATAGCTATATCGCTGGCGTGCTCTTTCTTTTTACGCTCACTAGTTTGTATGTTGGCAACTAG

Upstream 100 bases:

>100_bases
AGCCCGAATAGCGAGCACAAAGTAGGATTACCACAAGCATGCTGCTGCTATATAATGAATACAGAGAGAGGCTTGATTTA
TCGACCATAGGAAACGCAGC

Downstream 100 bases:

>100_bases
GCTCGAATTGGCTAGGGCGATAATCGTACCTAGCCAACCTCTAAGCTTGAATTGTATAATTGGGCTGTTCTCGGTGTTTT
GTGCGAAGGAGATCAATCAA

Product: 4-hydroxybenzoate polyprenyltransferase

Products: NA

Alternate protein names: 4-HB polyprenyltransferase [H]

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTSLRQTLHQTAINIKVEHTVFALPFAYLGLFLANKQFPGWQPLILVTLAMVAARTAAMSFNRYLDRHFDARNPRTSIRP
IPAGTLSATSVLIVGLVSLAVLVISAGLLNPLCLLLSPIALIALTGYSYMKRFTWLCHFGLGFTDAIAPAGGWLAVDPNF
RLSMILLAAAVGIWIAGFDLIYACQDVDFDRKEGLHSLPARFSIATSLRVAKICHIAMIGLLLAVGVSLSLSWPFYVGVA
AAAGLLVYEHSLINPRDLSKIDIAFFNVNSYIAGVLFLFTLTSLYVGN

Sequences:

>Translated_288_residues
MTSLRQTLHQTAINIKVEHTVFALPFAYLGLFLANKQFPGWQPLILVTLAMVAARTAAMSFNRYLDRHFDARNPRTSIRP
IPAGTLSATSVLIVGLVSLAVLVISAGLLNPLCLLLSPIALIALTGYSYMKRFTWLCHFGLGFTDAIAPAGGWLAVDPNF
RLSMILLAAAVGIWIAGFDLIYACQDVDFDRKEGLHSLPARFSIATSLRVAKICHIAMIGLLLAVGVSLSLSWPFYVGVA
AAAGLLVYEHSLINPRDLSKIDIAFFNVNSYIAGVLFLFTLTSLYVGN
>Mature_287_residues
TSLRQTLHQTAINIKVEHTVFALPFAYLGLFLANKQFPGWQPLILVTLAMVAARTAAMSFNRYLDRHFDARNPRTSIRPI
PAGTLSATSVLIVGLVSLAVLVISAGLLNPLCLLLSPIALIALTGYSYMKRFTWLCHFGLGFTDAIAPAGGWLAVDPNFR
LSMILLAAAVGIWIAGFDLIYACQDVDFDRKEGLHSLPARFSIATSLRVAKICHIAMIGLLLAVGVSLSLSWPFYVGVAA
AAGLLVYEHSLINPRDLSKIDIAFFNVNSYIAGVLFLFTLTSLYVGN

Specific function: Synthesis of 3-octaprenyl-4-hydroxybenzoate [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiA prenyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI260656052, Length=224, Percent_Identity=29.9107142857143, Blast_Score=73, Evalue=4e-13,
Organism=Escherichia coli, GI1790473, Length=226, Percent_Identity=33.1858407079646, Blast_Score=85, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17553718, Length=224, Percent_Identity=26.3392857142857, Blast_Score=74, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6324370, Length=240, Percent_Identity=29.5833333333333, Blast_Score=62, Evalue=1e-10,
Organism=Drosophila melanogaster, GI21355567, Length=230, Percent_Identity=29.5652173913043, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006370
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: 2.5.1.-

Molecular weight: Translated: 31286; Mature: 31155

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLRQTLHQTAINIKVEHTVFALPFAYLGLFLANKQFPGWQPLILVTLAMVAARTAAMS
CCHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
FNRYLDRHFDARNPRTSIRPIPAGTLSATSVLIVGLVSLAVLVISAGLLNPLCLLLSPIA
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIALTGYSYMKRFTWLCHFGLGFTDAIAPAGGWLAVDPNFRLSMILLAAAVGIWIAGFDL
HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
IYACQDVDFDRKEGLHSLPARFSIATSLRVAKICHIAMIGLLLAVGVSLSLSWPFYVGVA
HHHHCCCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH
AAAGLLVYEHSLINPRDLSKIDIAFFNVNSYIAGVLFLFTLTSLYVGN
HHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSLRQTLHQTAINIKVEHTVFALPFAYLGLFLANKQFPGWQPLILVTLAMVAARTAAMS
CHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
FNRYLDRHFDARNPRTSIRPIPAGTLSATSVLIVGLVSLAVLVISAGLLNPLCLLLSPIA
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIALTGYSYMKRFTWLCHFGLGFTDAIAPAGGWLAVDPNFRLSMILLAAAVGIWIAGFDL
HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
IYACQDVDFDRKEGLHSLPARFSIATSLRVAKICHIAMIGLLLAVGVSLSLSWPFYVGVA
HHHHCCCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH
AAAGLLVYEHSLINPRDLSKIDIAFFNVNSYIAGVLFLFTLTSLYVGN
HHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA