The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898205

Identifier: 159898205

GI number: 159898205

Start: 1955359

End: 1956561

Strand: Reverse

Name: 159898205

Synonym: Haur_1681

Alternate gene names: NA

Gene position: 1956561-1955359 (Counterclockwise)

Preceding gene: 159898206

Following gene: 159898204

Centisome position: 30.83

GC content: 52.87

Gene sequence:

>1203_bases
ATGCTTAATCGTCGCCAATTGCTAGGGCTAGCGCCAAACTTTCAGGTTGTTCAACGCCAACCTATCGCGGTTAGCCCAGC
CCAACGTGATGTTTTGATTTGTGTATTTCAGCGGGGCGGAGCCGATGGATTGAACATGGTTGTGCCGCATGGCGAGGCTG
CCTACTACCAAGCTCGCCCAAATGTGGCGATTGCCCAGCCCAACCAACAATTGGGGGCAATTGATCTTGATGGATTTTTT
GGGCTGCACCCCAGCCTTGAGCCATTCAAAGAAATTTGGAATGCCAAACAACTGGCGATCGTGCATGCATGCGGCTCGCC
CGACCCAACCCACTCGCATTTTGATGCCATGGATTATATGGAGCGAGGCACACCTGGCCAAAAGAGCGACCCGCGCGGCT
GGCTAGGGCGGCATCTAGCAGCAACTCAACAAAGCAACGATTCACCATTTCGCGCCGTAGGGTTTGGCTCGTTGCTCCAA
GCCTCATTGCGCGGCGGCTCGGCCACAGCACTCACCAGCCTTGAGGCTTTTAATCTTCAAGCCAACCGCCTAGAACTACC
CAAACTTCGTGCTGCCCATGGTCAACTCTATCGTGGCTCGGGCATGTTGGTTGGAGCCGCCCAACAAACTTTTGCGGCAC
TTGAAATTATGCAAAAACTCAATCCAAGCCAATATCAACCGAGCGATGGTGCGGTGTATCCTGATAGCCCTTATGGCAAG
GCTTTAAAGCAAATTGCTCAACTGATCAAGGCCGATTTGGGCTTAGAGGTCGCCTGTGCCGACATCGGCGATTGGGATAC
GCATGTCAATCAAGGTGGCGCTGATGGCGAGATGGCCGCCAATTTGGCTGAATTTGCGGCTGGCCTACGGGCATTGTATA
CCGATTTGAGCGCCAATTTAGGCCGAGTGACGATTGTAACCATGAGCGAATTTGGGCGCAGGGCTGCTGAAAACGGTGGC
GGCGGGACTGATCATGGCCATGGCAATGTGATGTTTGTTATGGGTGGCAACGTAACTGGCGGCATCTATGGCACATGGCC
AGGCTTGCAGCCCGAACAACTTTACGGGCCTGGCGATTTAGCAATCACCAGCGATTTTCGCGATGTATTGGCTGAAATTT
TACAAAAGCGCCTGCGCGACCAACAGCTTAATGAGCTATTTCCTGAGTATACGCCAAGCCAAAGTTACCAGTTAGTTCGT
TAA

Upstream 100 bases:

>100_bases
ACCATTGGTTAGCAATTCAGGTAGTTAATCGGCCTAACCTGCGCGATCTTCGTGGTTTCAAGCTTCGTGGCCTTCGTCGA
TTATTCAAAGGAGTTTTATC

Downstream 100 bases:

>100_bases
TCTTTACCCAAAACAAGCTTATCGCGCGGTAAATTCATAGTACAATCAGGATTAGATCCTATGATTGAGTTGTGAGGAAT
TAAGCAGATGGCTAAAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MLNRRQLLGLAPNFQVVQRQPIAVSPAQRDVLICVFQRGGADGLNMVVPHGEAAYYQARPNVAIAQPNQQLGAIDLDGFF
GLHPSLEPFKEIWNAKQLAIVHACGSPDPTHSHFDAMDYMERGTPGQKSDPRGWLGRHLAATQQSNDSPFRAVGFGSLLQ
ASLRGGSATALTSLEAFNLQANRLELPKLRAAHGQLYRGSGMLVGAAQQTFAALEIMQKLNPSQYQPSDGAVYPDSPYGK
ALKQIAQLIKADLGLEVACADIGDWDTHVNQGGADGEMAANLAEFAAGLRALYTDLSANLGRVTIVTMSEFGRRAAENGG
GGTDHGHGNVMFVMGGNVTGGIYGTWPGLQPEQLYGPGDLAITSDFRDVLAEILQKRLRDQQLNELFPEYTPSQSYQLVR

Sequences:

>Translated_400_residues
MLNRRQLLGLAPNFQVVQRQPIAVSPAQRDVLICVFQRGGADGLNMVVPHGEAAYYQARPNVAIAQPNQQLGAIDLDGFF
GLHPSLEPFKEIWNAKQLAIVHACGSPDPTHSHFDAMDYMERGTPGQKSDPRGWLGRHLAATQQSNDSPFRAVGFGSLLQ
ASLRGGSATALTSLEAFNLQANRLELPKLRAAHGQLYRGSGMLVGAAQQTFAALEIMQKLNPSQYQPSDGAVYPDSPYGK
ALKQIAQLIKADLGLEVACADIGDWDTHVNQGGADGEMAANLAEFAAGLRALYTDLSANLGRVTIVTMSEFGRRAAENGG
GGTDHGHGNVMFVMGGNVTGGIYGTWPGLQPEQLYGPGDLAITSDFRDVLAEILQKRLRDQQLNELFPEYTPSQSYQLVR
>Mature_400_residues
MLNRRQLLGLAPNFQVVQRQPIAVSPAQRDVLICVFQRGGADGLNMVVPHGEAAYYQARPNVAIAQPNQQLGAIDLDGFF
GLHPSLEPFKEIWNAKQLAIVHACGSPDPTHSHFDAMDYMERGTPGQKSDPRGWLGRHLAATQQSNDSPFRAVGFGSLLQ
ASLRGGSATALTSLEAFNLQANRLELPKLRAAHGQLYRGSGMLVGAAQQTFAALEIMQKLNPSQYQPSDGAVYPDSPYGK
ALKQIAQLIKADLGLEVACADIGDWDTHVNQGGADGEMAANLAEFAAGLRALYTDLSANLGRVTIVTMSEFGRRAAENGG
GGTDHGHGNVMFVMGGNVTGGIYGTWPGLQPEQLYGPGDLAITSDFRDVLAEILQKRLRDQQLNELFPEYTPSQSYQLVR

Specific function: Unknown

COG id: COG4102

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43123; Mature: 43123

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRRQLLGLAPNFQVVQRQPIAVSPAQRDVLICVFQRGGADGLNMVVPHGEAAYYQARP
CCCCHHHEECCCCCHHEECCCCEECCCCCCEEEEEEECCCCCCCEEEECCCCCEEEECCC
NVAIAQPNQQLGAIDLDGFFGLHPSLEPFKEIWNAKQLAIVHACGSPDPTHSHFDAMDYM
CEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHH
ERGTPGQKSDPRGWLGRHLAATQQSNDSPFRAVGFGSLLQASLRGGSATALTSLEAFNLQ
HCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHCCC
ANRLELPKLRAAHGQLYRGSGMLVGAAQQTFAALEIMQKLNPSQYQPSDGAVYPDSPYGK
CCCCCCCHHHHHCCCEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
ALKQIAQLIKADLGLEVACADIGDWDTHVNQGGADGEMAANLAEFAAGLRALYTDLSANL
HHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
GRVTIVTMSEFGRRAAENGGGGTDHGHGNVMFVMGGNVTGGIYGTWPGLQPEQLYGPGDL
CEEEEEEHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCHHHCCCCCCE
AITSDFRDVLAEILQKRLRDQQLNELFPEYTPSQSYQLVR
EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC
>Mature Secondary Structure
MLNRRQLLGLAPNFQVVQRQPIAVSPAQRDVLICVFQRGGADGLNMVVPHGEAAYYQARP
CCCCHHHEECCCCCHHEECCCCEECCCCCCEEEEEEECCCCCCCEEEECCCCCEEEECCC
NVAIAQPNQQLGAIDLDGFFGLHPSLEPFKEIWNAKQLAIVHACGSPDPTHSHFDAMDYM
CEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHH
ERGTPGQKSDPRGWLGRHLAATQQSNDSPFRAVGFGSLLQASLRGGSATALTSLEAFNLQ
HCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHCCC
ANRLELPKLRAAHGQLYRGSGMLVGAAQQTFAALEIMQKLNPSQYQPSDGAVYPDSPYGK
CCCCCCCHHHHHCCCEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
ALKQIAQLIKADLGLEVACADIGDWDTHVNQGGADGEMAANLAEFAAGLRALYTDLSANL
HHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
GRVTIVTMSEFGRRAAENGGGGTDHGHGNVMFVMGGNVTGGIYGTWPGLQPEQLYGPGDL
CEEEEEEHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCHHHCCCCCCE
AITSDFRDVLAEILQKRLRDQQLNELFPEYTPSQSYQLVR
EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA