Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898206

Identifier: 159898206

GI number: 159898206

Start: 1956733

End: 1958310

Strand: Reverse

Name: 159898206

Synonym: Haur_1682

Alternate gene names: NA

Gene position: 1958310-1956733 (Counterclockwise)

Preceding gene: 159898211

Following gene: 159898205

Centisome position: 30.86

GC content: 50.06

Gene sequence:

>1578_bases
ATGCTGAATCGACGAAATTTTTTGAAAATCAGTGGACTGGCCGCTGCCTATAGTGTGCTCCCCCTCTGGCTAAGCGCCTG
TGATCGGGCGGCTCCTAGCGCAATCGCCCAGCCAACCTGGGAGCTTGAAGCTCCGACCAACGGCGATCATCGCAGCCGTG
TGGCAATTCGCCATTTGCTCAATCGGCTCAGCTATGGCCCATTGCCCGGCCAAATTGAGCAAGTTCAAGCCCTCGGTTGG
GATGCCTACCTTGAACAGCAATTAAACCCAAGCCAGCTTGACGACTCAGCACTTGAGCAACAATTGGCTCAATTTACAAC
CCTCAAGCTCTCTAGTGCCCATTTAATCGAGCACTATCCCAAAGGTGCGAACGGCCCACGCCTGATTATGCGCGAGCTTC
AAGCCGCTAGTTTATTGCGGGCAGCGAGCAGCCAACGCCAACTATTCGAGCTAATGGTCGATTTTTGGAGCAACCATTTC
AATATTTACATTGGCAAAAATCAGGTCAAATGGCTCAAAACGGCTGATGATCGTGAAGTAATTCGCCAGCATGCGCTCGG
TAAATTCCGTGATTTATTGCTGGCTTCGGCCAAAAGCCCAGCCATGTTGGTCTATCTCGATAATGCCGAAAACGTGCGAC
CTGGAGTTAAGGTTGGCAAGAAGATGCTTGGCTTGAATGAAAATTATGCCCGCGAACTGCTCGAACTGCATACCGTCGGG
GCTGATGCAGGCTATAGCCAAGCCGATGTCCAAGCAGTTGCCCGTGTTTTGACGGGCTGGACAATCACCCGAGCCAACAG
CGAGCAGCCTGGACTTTTCCAATTTCTGCCCAAATTTCACGATGTTATGGCCAAACGAATCGATTTTCTGCAGCTAGATT
TGGCTGCCGATGGCGAAATCGAAGAGGGCGAATTATTGTTAAAGCTGTTGGCTGAACACCCTAAAACTGCCCAACGATTG
GCCTATAAGCTCTGCCTACGCTTCGTCAGCGATGATCCACCAGCTGATTTAGTTGAGCGGGTTGCTCAAGCGTATCTTCA
GCACGATACCGATATTCGCGCCATGCTCAACATGTTAGTCAACTCCGCTGAGTTTTTGGCCGCTGCTCAGCAAAAAATCA
AACAGCCCATGCATCTGTTAATTTCAGCCATTCGCGCTACCAATAGCAGCATCACCAAACAAGCCTTCAAGGGTAAAAAC
AACCTCCTTGATCAATTGGAAACCTTAGGCCAAATGTTTTTCAACTGGCCTCCACCCGATGGCTATCCCCAAATCAGCAG
CGCTTGGATCAACACTGGCGCGATGCTCAGTCGTTGGAATCTGGCCTTTGCACTCGCTGAAGGTCGAATCGACGGCCTAA
AAACCGATGTCCCTAAATTCGCCAAACAGCCAAGCCAAGCCAGCGAATTGGTCGATACGCTAGCCGATTATCTCAATTTA
AGCCTTGCCGCCGAGTCGCGAGCCAGTTTAATCGATTATTTAAATGATAGCCAATCACCAAACCCAACCGTTGATCAAAC
TAAAATCGCTGGCCTACTTGGCCTATTGCTGACCAGCCCTGAATTTCAATTGTGCTGA

Upstream 100 bases:

>100_bases
ACATACTTTTAATCGCCGAAATGTCTTCATTATTTCTTCATTGTTTACTCATAATCTAGCAGCACCGACCAAACCGACCC
ATCCAGCAGGAGGTTTGCTG

Downstream 100 bases:

>100_bases
TAAGCACATGGGGGAACGATTTTTAACCACGAAGGCCACGAAGAACACGAATGCTGATTAAACGGTAGTAAACCATTGGT
TAGCAATTCAGGTAGTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MLNRRNFLKISGLAAAYSVLPLWLSACDRAAPSAIAQPTWELEAPTNGDHRSRVAIRHLLNRLSYGPLPGQIEQVQALGW
DAYLEQQLNPSQLDDSALEQQLAQFTTLKLSSAHLIEHYPKGANGPRLIMRELQAASLLRAASSQRQLFELMVDFWSNHF
NIYIGKNQVKWLKTADDREVIRQHALGKFRDLLLASAKSPAMLVYLDNAENVRPGVKVGKKMLGLNENYARELLELHTVG
ADAGYSQADVQAVARVLTGWTITRANSEQPGLFQFLPKFHDVMAKRIDFLQLDLAADGEIEEGELLLKLLAEHPKTAQRL
AYKLCLRFVSDDPPADLVERVAQAYLQHDTDIRAMLNMLVNSAEFLAAAQQKIKQPMHLLISAIRATNSSITKQAFKGKN
NLLDQLETLGQMFFNWPPPDGYPQISSAWINTGAMLSRWNLAFALAEGRIDGLKTDVPKFAKQPSQASELVDTLADYLNL
SLAAESRASLIDYLNDSQSPNPTVDQTKIAGLLGLLLTSPEFQLC

Sequences:

>Translated_525_residues
MLNRRNFLKISGLAAAYSVLPLWLSACDRAAPSAIAQPTWELEAPTNGDHRSRVAIRHLLNRLSYGPLPGQIEQVQALGW
DAYLEQQLNPSQLDDSALEQQLAQFTTLKLSSAHLIEHYPKGANGPRLIMRELQAASLLRAASSQRQLFELMVDFWSNHF
NIYIGKNQVKWLKTADDREVIRQHALGKFRDLLLASAKSPAMLVYLDNAENVRPGVKVGKKMLGLNENYARELLELHTVG
ADAGYSQADVQAVARVLTGWTITRANSEQPGLFQFLPKFHDVMAKRIDFLQLDLAADGEIEEGELLLKLLAEHPKTAQRL
AYKLCLRFVSDDPPADLVERVAQAYLQHDTDIRAMLNMLVNSAEFLAAAQQKIKQPMHLLISAIRATNSSITKQAFKGKN
NLLDQLETLGQMFFNWPPPDGYPQISSAWINTGAMLSRWNLAFALAEGRIDGLKTDVPKFAKQPSQASELVDTLADYLNL
SLAAESRASLIDYLNDSQSPNPTVDQTKIAGLLGLLLTSPEFQLC
>Mature_525_residues
MLNRRNFLKISGLAAAYSVLPLWLSACDRAAPSAIAQPTWELEAPTNGDHRSRVAIRHLLNRLSYGPLPGQIEQVQALGW
DAYLEQQLNPSQLDDSALEQQLAQFTTLKLSSAHLIEHYPKGANGPRLIMRELQAASLLRAASSQRQLFELMVDFWSNHF
NIYIGKNQVKWLKTADDREVIRQHALGKFRDLLLASAKSPAMLVYLDNAENVRPGVKVGKKMLGLNENYARELLELHTVG
ADAGYSQADVQAVARVLTGWTITRANSEQPGLFQFLPKFHDVMAKRIDFLQLDLAADGEIEEGELLLKLLAEHPKTAQRL
AYKLCLRFVSDDPPADLVERVAQAYLQHDTDIRAMLNMLVNSAEFLAAAQQKIKQPMHLLISAIRATNSSITKQAFKGKN
NLLDQLETLGQMFFNWPPPDGYPQISSAWINTGAMLSRWNLAFALAEGRIDGLKTDVPKFAKQPSQASELVDTLADYLNL
SLAAESRASLIDYLNDSQSPNPTVDQTKIAGLLGLLLTSPEFQLC

Specific function: Unknown

COG id: COG5267

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58416; Mature: 58416

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRRNFLKISGLAAAYSVLPLWLSACDRAAPSAIAQPTWELEAPTNGDHRSRVAIRHLL
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEECCCCCCCHHHHHHHHHHH
NRLSYGPLPGQIEQVQALGWDAYLEQQLNPSQLDDSALEQQLAQFTTLKLSSAHLIEHYP
HHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
KGANGPRLIMRELQAASLLRAASSQRQLFELMVDFWSNHFNIYIGKNQVKWLKTADDREV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHCCCHHHH
IRQHALGKFRDLLLASAKSPAMLVYLDNAENVRPGVKVGKKMLGLNENYARELLELHTVG
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCC
ADAGYSQADVQAVARVLTGWTITRANSEQPGLFQFLPKFHDVMAKRIDFLQLDLAADGEI
CCCCCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCC
EEGELLLKLLAEHPKTAQRLAYKLCLRFVSDDPPADLVERVAQAYLQHDTDIRAMLNMLV
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
NSAEFLAAAQQKIKQPMHLLISAIRATNSSITKQAFKGKNNLLDQLETLGQMFFNWPPPD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
GYPQISSAWINTGAMLSRWNLAFALAEGRIDGLKTDVPKFAKQPSQASELVDTLADYLNL
CCCCHHHHHHCCCHHHHHHHHHEEECCCCCCCHHCCCHHHHCCCCHHHHHHHHHHHHHHH
SLAAESRASLIDYLNDSQSPNPTVDQTKIAGLLGLLLTSPEFQLC
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLNRRNFLKISGLAAAYSVLPLWLSACDRAAPSAIAQPTWELEAPTNGDHRSRVAIRHLL
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEECCCCCCCHHHHHHHHHHH
NRLSYGPLPGQIEQVQALGWDAYLEQQLNPSQLDDSALEQQLAQFTTLKLSSAHLIEHYP
HHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
KGANGPRLIMRELQAASLLRAASSQRQLFELMVDFWSNHFNIYIGKNQVKWLKTADDREV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHCCCHHHH
IRQHALGKFRDLLLASAKSPAMLVYLDNAENVRPGVKVGKKMLGLNENYARELLELHTVG
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCC
ADAGYSQADVQAVARVLTGWTITRANSEQPGLFQFLPKFHDVMAKRIDFLQLDLAADGEI
CCCCCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCC
EEGELLLKLLAEHPKTAQRLAYKLCLRFVSDDPPADLVERVAQAYLQHDTDIRAMLNMLV
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
NSAEFLAAAQQKIKQPMHLLISAIRATNSSITKQAFKGKNNLLDQLETLGQMFFNWPPPD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
GYPQISSAWINTGAMLSRWNLAFALAEGRIDGLKTDVPKFAKQPSQASELVDTLADYLNL
CCCCHHHHHHCCCHHHHHHHHHEEECCCCCCCHHCCCHHHHCCCCHHHHHHHHHHHHHHH
SLAAESRASLIDYLNDSQSPNPTVDQTKIAGLLGLLLTSPEFQLC
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA