| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898206
Identifier: 159898206
GI number: 159898206
Start: 1956733
End: 1958310
Strand: Reverse
Name: 159898206
Synonym: Haur_1682
Alternate gene names: NA
Gene position: 1958310-1956733 (Counterclockwise)
Preceding gene: 159898211
Following gene: 159898205
Centisome position: 30.86
GC content: 50.06
Gene sequence:
>1578_bases ATGCTGAATCGACGAAATTTTTTGAAAATCAGTGGACTGGCCGCTGCCTATAGTGTGCTCCCCCTCTGGCTAAGCGCCTG TGATCGGGCGGCTCCTAGCGCAATCGCCCAGCCAACCTGGGAGCTTGAAGCTCCGACCAACGGCGATCATCGCAGCCGTG TGGCAATTCGCCATTTGCTCAATCGGCTCAGCTATGGCCCATTGCCCGGCCAAATTGAGCAAGTTCAAGCCCTCGGTTGG GATGCCTACCTTGAACAGCAATTAAACCCAAGCCAGCTTGACGACTCAGCACTTGAGCAACAATTGGCTCAATTTACAAC CCTCAAGCTCTCTAGTGCCCATTTAATCGAGCACTATCCCAAAGGTGCGAACGGCCCACGCCTGATTATGCGCGAGCTTC AAGCCGCTAGTTTATTGCGGGCAGCGAGCAGCCAACGCCAACTATTCGAGCTAATGGTCGATTTTTGGAGCAACCATTTC AATATTTACATTGGCAAAAATCAGGTCAAATGGCTCAAAACGGCTGATGATCGTGAAGTAATTCGCCAGCATGCGCTCGG TAAATTCCGTGATTTATTGCTGGCTTCGGCCAAAAGCCCAGCCATGTTGGTCTATCTCGATAATGCCGAAAACGTGCGAC CTGGAGTTAAGGTTGGCAAGAAGATGCTTGGCTTGAATGAAAATTATGCCCGCGAACTGCTCGAACTGCATACCGTCGGG GCTGATGCAGGCTATAGCCAAGCCGATGTCCAAGCAGTTGCCCGTGTTTTGACGGGCTGGACAATCACCCGAGCCAACAG CGAGCAGCCTGGACTTTTCCAATTTCTGCCCAAATTTCACGATGTTATGGCCAAACGAATCGATTTTCTGCAGCTAGATT TGGCTGCCGATGGCGAAATCGAAGAGGGCGAATTATTGTTAAAGCTGTTGGCTGAACACCCTAAAACTGCCCAACGATTG GCCTATAAGCTCTGCCTACGCTTCGTCAGCGATGATCCACCAGCTGATTTAGTTGAGCGGGTTGCTCAAGCGTATCTTCA GCACGATACCGATATTCGCGCCATGCTCAACATGTTAGTCAACTCCGCTGAGTTTTTGGCCGCTGCTCAGCAAAAAATCA AACAGCCCATGCATCTGTTAATTTCAGCCATTCGCGCTACCAATAGCAGCATCACCAAACAAGCCTTCAAGGGTAAAAAC AACCTCCTTGATCAATTGGAAACCTTAGGCCAAATGTTTTTCAACTGGCCTCCACCCGATGGCTATCCCCAAATCAGCAG CGCTTGGATCAACACTGGCGCGATGCTCAGTCGTTGGAATCTGGCCTTTGCACTCGCTGAAGGTCGAATCGACGGCCTAA AAACCGATGTCCCTAAATTCGCCAAACAGCCAAGCCAAGCCAGCGAATTGGTCGATACGCTAGCCGATTATCTCAATTTA AGCCTTGCCGCCGAGTCGCGAGCCAGTTTAATCGATTATTTAAATGATAGCCAATCACCAAACCCAACCGTTGATCAAAC TAAAATCGCTGGCCTACTTGGCCTATTGCTGACCAGCCCTGAATTTCAATTGTGCTGA
Upstream 100 bases:
>100_bases ACATACTTTTAATCGCCGAAATGTCTTCATTATTTCTTCATTGTTTACTCATAATCTAGCAGCACCGACCAAACCGACCC ATCCAGCAGGAGGTTTGCTG
Downstream 100 bases:
>100_bases TAAGCACATGGGGGAACGATTTTTAACCACGAAGGCCACGAAGAACACGAATGCTGATTAAACGGTAGTAAACCATTGGT TAGCAATTCAGGTAGTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MLNRRNFLKISGLAAAYSVLPLWLSACDRAAPSAIAQPTWELEAPTNGDHRSRVAIRHLLNRLSYGPLPGQIEQVQALGW DAYLEQQLNPSQLDDSALEQQLAQFTTLKLSSAHLIEHYPKGANGPRLIMRELQAASLLRAASSQRQLFELMVDFWSNHF NIYIGKNQVKWLKTADDREVIRQHALGKFRDLLLASAKSPAMLVYLDNAENVRPGVKVGKKMLGLNENYARELLELHTVG ADAGYSQADVQAVARVLTGWTITRANSEQPGLFQFLPKFHDVMAKRIDFLQLDLAADGEIEEGELLLKLLAEHPKTAQRL AYKLCLRFVSDDPPADLVERVAQAYLQHDTDIRAMLNMLVNSAEFLAAAQQKIKQPMHLLISAIRATNSSITKQAFKGKN NLLDQLETLGQMFFNWPPPDGYPQISSAWINTGAMLSRWNLAFALAEGRIDGLKTDVPKFAKQPSQASELVDTLADYLNL SLAAESRASLIDYLNDSQSPNPTVDQTKIAGLLGLLLTSPEFQLC
Sequences:
>Translated_525_residues MLNRRNFLKISGLAAAYSVLPLWLSACDRAAPSAIAQPTWELEAPTNGDHRSRVAIRHLLNRLSYGPLPGQIEQVQALGW DAYLEQQLNPSQLDDSALEQQLAQFTTLKLSSAHLIEHYPKGANGPRLIMRELQAASLLRAASSQRQLFELMVDFWSNHF NIYIGKNQVKWLKTADDREVIRQHALGKFRDLLLASAKSPAMLVYLDNAENVRPGVKVGKKMLGLNENYARELLELHTVG ADAGYSQADVQAVARVLTGWTITRANSEQPGLFQFLPKFHDVMAKRIDFLQLDLAADGEIEEGELLLKLLAEHPKTAQRL AYKLCLRFVSDDPPADLVERVAQAYLQHDTDIRAMLNMLVNSAEFLAAAQQKIKQPMHLLISAIRATNSSITKQAFKGKN NLLDQLETLGQMFFNWPPPDGYPQISSAWINTGAMLSRWNLAFALAEGRIDGLKTDVPKFAKQPSQASELVDTLADYLNL SLAAESRASLIDYLNDSQSPNPTVDQTKIAGLLGLLLTSPEFQLC >Mature_525_residues MLNRRNFLKISGLAAAYSVLPLWLSACDRAAPSAIAQPTWELEAPTNGDHRSRVAIRHLLNRLSYGPLPGQIEQVQALGW DAYLEQQLNPSQLDDSALEQQLAQFTTLKLSSAHLIEHYPKGANGPRLIMRELQAASLLRAASSQRQLFELMVDFWSNHF NIYIGKNQVKWLKTADDREVIRQHALGKFRDLLLASAKSPAMLVYLDNAENVRPGVKVGKKMLGLNENYARELLELHTVG ADAGYSQADVQAVARVLTGWTITRANSEQPGLFQFLPKFHDVMAKRIDFLQLDLAADGEIEEGELLLKLLAEHPKTAQRL AYKLCLRFVSDDPPADLVERVAQAYLQHDTDIRAMLNMLVNSAEFLAAAQQKIKQPMHLLISAIRATNSSITKQAFKGKN NLLDQLETLGQMFFNWPPPDGYPQISSAWINTGAMLSRWNLAFALAEGRIDGLKTDVPKFAKQPSQASELVDTLADYLNL SLAAESRASLIDYLNDSQSPNPTVDQTKIAGLLGLLLTSPEFQLC
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58416; Mature: 58416
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRRNFLKISGLAAAYSVLPLWLSACDRAAPSAIAQPTWELEAPTNGDHRSRVAIRHLL CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEECCCCCCCHHHHHHHHHHH NRLSYGPLPGQIEQVQALGWDAYLEQQLNPSQLDDSALEQQLAQFTTLKLSSAHLIEHYP HHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC KGANGPRLIMRELQAASLLRAASSQRQLFELMVDFWSNHFNIYIGKNQVKWLKTADDREV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHCCCHHHH IRQHALGKFRDLLLASAKSPAMLVYLDNAENVRPGVKVGKKMLGLNENYARELLELHTVG HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCC ADAGYSQADVQAVARVLTGWTITRANSEQPGLFQFLPKFHDVMAKRIDFLQLDLAADGEI CCCCCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCC EEGELLLKLLAEHPKTAQRLAYKLCLRFVSDDPPADLVERVAQAYLQHDTDIRAMLNMLV CHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH NSAEFLAAAQQKIKQPMHLLISAIRATNSSITKQAFKGKNNLLDQLETLGQMFFNWPPPD HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC GYPQISSAWINTGAMLSRWNLAFALAEGRIDGLKTDVPKFAKQPSQASELVDTLADYLNL CCCCHHHHHHCCCHHHHHHHHHEEECCCCCCCHHCCCHHHHCCCCHHHHHHHHHHHHHHH SLAAESRASLIDYLNDSQSPNPTVDQTKIAGLLGLLLTSPEFQLC HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLNRRNFLKISGLAAAYSVLPLWLSACDRAAPSAIAQPTWELEAPTNGDHRSRVAIRHLL CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEECCCCCCCHHHHHHHHHHH NRLSYGPLPGQIEQVQALGWDAYLEQQLNPSQLDDSALEQQLAQFTTLKLSSAHLIEHYP HHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC KGANGPRLIMRELQAASLLRAASSQRQLFELMVDFWSNHFNIYIGKNQVKWLKTADDREV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHCCCHHHH IRQHALGKFRDLLLASAKSPAMLVYLDNAENVRPGVKVGKKMLGLNENYARELLELHTVG HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCC ADAGYSQADVQAVARVLTGWTITRANSEQPGLFQFLPKFHDVMAKRIDFLQLDLAADGEI CCCCCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCC EEGELLLKLLAEHPKTAQRLAYKLCLRFVSDDPPADLVERVAQAYLQHDTDIRAMLNMLV CHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH NSAEFLAAAQQKIKQPMHLLISAIRATNSSITKQAFKGKNNLLDQLETLGQMFFNWPPPD HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC GYPQISSAWINTGAMLSRWNLAFALAEGRIDGLKTDVPKFAKQPSQASELVDTLADYLNL CCCCHHHHHHCCCHHHHHHHHHEEECCCCCCCHHCCCHHHHCCCCHHHHHHHHHHHHHHH SLAAESRASLIDYLNDSQSPNPTVDQTKIAGLLGLLLTSPEFQLC HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA