| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897733
Identifier: 159897733
GI number: 159897733
Start: 1386871
End: 1387878
Strand: Reverse
Name: 159897733
Synonym: Haur_1204
Alternate gene names: NA
Gene position: 1387878-1386871 (Counterclockwise)
Preceding gene: 159897734
Following gene: 159897732
Centisome position: 21.87
GC content: 50.4
Gene sequence:
>1008_bases ATGCACATGCAGCGTTTATGCTATTTTCTAGGTTTGCTTGGGTTAAGCCTTAGCTTGTTTAGTTGCAGTCGAGCTAATCG TCAAGCTGTCGCCGTTTCACCGAACTCAACCAGCCAAGTTGCTGAGCCAAATAGCCTTGGCCTGCCCAAAGGCACGTTGC ACGAAGCAGAATTGCTGGTTGCAGGCGAAACTCGTAGTTTTATCTATTATCTGCCAGCAAAGCTTGATCCAGTCGGAGCA CCATTGGTTTTTATGTTGCATGGCGGCGGTGGGCTTGGTAATTCGGCTATGACATTAACCACCCAAGAACGCTGGAATAC ACTTGCCGACCAACATGGCTTTATTGTGGCCTATCCTGATGGCATGAATCGGCGCTGGAACGATTGTCGCAGCGATTGGG ATAACCCTTCAACCAGCGATGATGTGCAATTTATCAGCACGTTGATCGACCACTTTGCTCAAACCTATTCAATTGATCAG ACGCGGGTCTATGCGACAGGCCACTCCAATGGCTCGATGATGTCGCTACGACTAGCGCTCGAATTGCCTGATCGGATTGC GGCGGTGGTTGGTAGCGCGGGGTATATGGCTCAAAATAGTCAGTGTAAAATGTTGGGTACGCCTGCCCCGTTGATGCTAT TGGCGGGCACTGCCGACCCAATTATGCCATACGCTGGTGGTTTAATTGATATTCCAGGCGATAGCCAGCAAGGCCAAGTG CTTTCCGCCGAAGCGACTATCCAAATGTGGCTCGACATGTTGAGCATTACCAACCAACCCAGCATTAGCCATTTGCCCGA TATCAACCCTGACGATCATAGCACTGTGACGATCAATACCTACCAAGACAACCTTGTGCGCTTTTATCGAATTGATGGCG GTGGACACACGTGGCCCAGTCTTGAAGAGCCAGCACGTTTGCAACAACGTCAAAATCCGCATAACCGCGATTTTTATGCA GCCGACGCAGCCTGGGAGTTTATGCAGCAACATCGGCTTGGGCAGTAG
Upstream 100 bases:
>100_bases AATCACCAAGGATGATCGCCAATCGCCTAATTGGGTGATGCTGCAATAGCGCTGCCTTTGCTACGATCAAGCTCGTTCTT TTTAACTAGGAGGGTGATCA
Downstream 100 bases:
>100_bases GTTTTTTTGATCCACGAAGCGCACGAAGGATGAGGCTATTGGTTATTTGGATTGTTTGAAACACCACACCATGTTCCGAT AGCCTAGCGCCATAAGCCTA
Product: phospholipase/carboxylesterase
Products: NA
Alternate protein names: Phospholipase/Carboxylesterase; Polyhydroxybutyrate Depolymerase; Esterase; Lipoprotein; Lipoprotein LpqP; Esterase/Lipase/Thioesterase; Poly(3-Hydroxybutyrate) Depolymerase; Secreted Hydrolase; Esterase Lipoprotein LpqC; Secreted Esterase; Esterase Lipoprotein; Hydrolase; PHB Depolymerase Family Esterase; Feruloyl Esterase; Secreted Protein; Feruloyl Esterase B; Poly(3-Hydroxyalkanoate) Depolymerase; Carbohydrate Esterase Family 1 Protein; Alpha/Beta Family Hydrolase; LOW QUALITY PROTEIN Esterase Lipoprotein LpqC; Exported Esterase/Hydrolase; Esterase-Like Protein; Poly(3-Hydroxybutyrate) Depolymerase-Like; Esterase PHB Depolymerase
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MHMQRLCYFLGLLGLSLSLFSCSRANRQAVAVSPNSTSQVAEPNSLGLPKGTLHEAELLVAGETRSFIYYLPAKLDPVGA PLVFMLHGGGGLGNSAMTLTTQERWNTLADQHGFIVAYPDGMNRRWNDCRSDWDNPSTSDDVQFISTLIDHFAQTYSIDQ TRVYATGHSNGSMMSLRLALELPDRIAAVVGSAGYMAQNSQCKMLGTPAPLMLLAGTADPIMPYAGGLIDIPGDSQQGQV LSAEATIQMWLDMLSITNQPSISHLPDINPDDHSTVTINTYQDNLVRFYRIDGGGHTWPSLEEPARLQQRQNPHNRDFYA ADAAWEFMQQHRLGQ
Sequences:
>Translated_335_residues MHMQRLCYFLGLLGLSLSLFSCSRANRQAVAVSPNSTSQVAEPNSLGLPKGTLHEAELLVAGETRSFIYYLPAKLDPVGA PLVFMLHGGGGLGNSAMTLTTQERWNTLADQHGFIVAYPDGMNRRWNDCRSDWDNPSTSDDVQFISTLIDHFAQTYSIDQ TRVYATGHSNGSMMSLRLALELPDRIAAVVGSAGYMAQNSQCKMLGTPAPLMLLAGTADPIMPYAGGLIDIPGDSQQGQV LSAEATIQMWLDMLSITNQPSISHLPDINPDDHSTVTINTYQDNLVRFYRIDGGGHTWPSLEEPARLQQRQNPHNRDFYA ADAAWEFMQQHRLGQ >Mature_335_residues MHMQRLCYFLGLLGLSLSLFSCSRANRQAVAVSPNSTSQVAEPNSLGLPKGTLHEAELLVAGETRSFIYYLPAKLDPVGA PLVFMLHGGGGLGNSAMTLTTQERWNTLADQHGFIVAYPDGMNRRWNDCRSDWDNPSTSDDVQFISTLIDHFAQTYSIDQ TRVYATGHSNGSMMSLRLALELPDRIAAVVGSAGYMAQNSQCKMLGTPAPLMLLAGTADPIMPYAGGLIDIPGDSQQGQV LSAEATIQMWLDMLSITNQPSISHLPDINPDDHSTVTINTYQDNLVRFYRIDGGGHTWPSLEEPARLQQRQNPHNRDFYA ADAAWEFMQQHRLGQ
Specific function: Unknown
COG id: COG3509
COG function: function code Q; Poly(3-hydroxybutyrate) depolymerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36857; Mature: 36857
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHMQRLCYFLGLLGLSLSLFSCSRANRQAVAVSPNSTSQVAEPNSLGLPKGTLHEAELLV CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE AGETRSFIYYLPAKLDPVGAPLVFMLHGGGGLGNSAMTLTTQERWNTLADQHGFIVAYPD ECCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHCCCEEEECCC GMNRRWNDCRSDWDNPSTSDDVQFISTLIDHFAQTYSIDQTRVYATGHSNGSMMSLRLAL CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEE ELPDRIAAVVGSAGYMAQNSQCKMLGTPAPLMLLAGTADPIMPYAGGLIDIPGDSQQGQV ECCHHHHHHHCCCCCEECCCCEEEECCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCE LSAEATIQMWLDMLSITNQPSISHLPDINPDDHSTVTINTYQDNLVRFYRIDGGGHTWPS EEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCC LEEPARLQQRQNPHNRDFYAADAAWEFMQQHRLGQ CCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCC >Mature Secondary Structure MHMQRLCYFLGLLGLSLSLFSCSRANRQAVAVSPNSTSQVAEPNSLGLPKGTLHEAELLV CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE AGETRSFIYYLPAKLDPVGAPLVFMLHGGGGLGNSAMTLTTQERWNTLADQHGFIVAYPD ECCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHCCCEEEECCC GMNRRWNDCRSDWDNPSTSDDVQFISTLIDHFAQTYSIDQTRVYATGHSNGSMMSLRLAL CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEE ELPDRIAAVVGSAGYMAQNSQCKMLGTPAPLMLLAGTADPIMPYAGGLIDIPGDSQQGQV ECCHHHHHHHCCCCCEECCCCEEEECCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCE LSAEATIQMWLDMLSITNQPSISHLPDINPDDHSTVTINTYQDNLVRFYRIDGGGHTWPS EEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCC LEEPARLQQRQNPHNRDFYAADAAWEFMQQHRLGQ CCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA