Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897734

Identifier: 159897734

GI number: 159897734

Start: 1387981

End: 1389594

Strand: Reverse

Name: 159897734

Synonym: Haur_1205

Alternate gene names: NA

Gene position: 1389594-1387981 (Counterclockwise)

Preceding gene: 159897737

Following gene: 159897733

Centisome position: 21.9

GC content: 39.47

Gene sequence:

>1614_bases
ATGCGATCATTCCGTGCTGGCTATCGTTTACTAGCATTATTGCTGCTCCTAACGCTTGGTTTTGCACCTGCTGATCAAGC
AACCTTGGCCCAAACACCACCAATTGGCTCATTAGTTGATGCCAATGGTGATGTTGGTGAGACGAGCGATCTTGTAATTG
GTCAAGACGGCCTAGGGTTGATCGCCTATTACGACACAACAAATCAAGATTTAAAAGTTGCCCACTGCAAAAATTTACAA
TGCAGCCAATCGAGCAGAGCGATTATTGATAGCCAATATAACGTTGGCAAATATGGATCAATCGTGATTGGCAACGACGG
TTTAGGCGTTATCGCTTATATGGATCTGACCAATCGCACATTAAAAATCGCACACTGCCAAAATGTTGAATGTAGTTCAG
CAACAATCTCTACGATAACCTCAACCCTGTGGGTTACCTTTAAAACGGATATTGTCATTGGCGCTAATGGGTTTCCGGCA
ATTCTCTATGCTGAAGATGATGCTATTGCGACGTTAAAATATGTACAATGCCATAATATCACGTGTAGTGTATCAACAAT
TACAACTCTTGATGAAGAGGTTTATGGATCATTTGCAGGAAAAATGATCGTAGGTGGTGATAATAAAGTCATTATTGCAT
ATAATAAATTGATCCATCATTTATCAGTTGAATTAAAGTTCAAGTATTGTAATAATGAAGCTTGTAGTGATGTTACAACT
ACACAAATATATATAAATCCCGCAGACATATTCTCTTATATCCTTGATATCACCATAAATTCAAATAACTACCCTATTAT
CAGTTTTTATGATATTGTTCAGGATCACTTATTAGTTGCCCAATGTAATACATTTAATTGTAGTGATTATACAATTAACC
TTGTTGATAGTATAGGCGCTGAAAGTGGTACAATGAGTAGTATTATGATTGGATTTGATGGATTACCTCTGATCGTTTAT
CATATACGGCCAATTGCTGGTGTGCATGATAATGACGATTTACGAATCGCACATTGTGAGAATATTGCATGCAGTAGTGC
GACGATTACGACGATTACAGCACATCTCGGTACATTCCTCGGGTATCATCCCACAATAAAAAAAGGGGCAGACAACTTAG
GACTATTTATTTATTTTGATTTGATTAATACCAATCTGCGGGTTGTTCATTGTGCCAATATTCTTTGCACAAAAGAAGGC
CAAGCAGACTTTGCGCAATATTTGGCATTAGTTCAAGCTCCTATAACCACGTTTAGCCTCTTAATCAATCAACAAACCAT
TCCTGTTCAACCTGTCGCCCAACAAGGCCAAGTATTTTATCAAACAACCATTAATGTTCCAAGCATTGTGCCAACTGGCG
GTTCGTTTGTGCTAAGTGCTGATCCTGATGGGCAAACGCCTTCACTGGTTGATGATGCCGTGGTATTCAAACTCAATAAT
CAAGAAGTGTTTCGCTTTGAATATACTGGTAGCATCGCACCCTCCCCTACTTTAGTCACAATTCCCAATTCATTGGTTGC
GCAATGGGCCGGCCAAACGCTAACTGTCGAATTCCACGATCGGTTTGCAGGCCAAATTCAAGCCTCAACCATGTACTTAG
TTTGGCTACCCTAA

Upstream 100 bases:

>100_bases
GAGCAAGAGCGAGGTTACAGGTTATTGAGAGAGTTTCCCAATTCATCTACTGACCCCGCATTTTTGCCTACCATGATCTC
TATCTAGAGGAGAATTGCGC

Downstream 100 bases:

>100_bases
TTAATCACCAAGGATGATCGCCAATCGCCTAATTGGGTGATGCTGCAATAGCGCTGCCTTTGCTACGATCAAGCTCGTTC
TTTTTAACTAGGAGGGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MRSFRAGYRLLALLLLLTLGFAPADQATLAQTPPIGSLVDANGDVGETSDLVIGQDGLGLIAYYDTTNQDLKVAHCKNLQ
CSQSSRAIIDSQYNVGKYGSIVIGNDGLGVIAYMDLTNRTLKIAHCQNVECSSATISTITSTLWVTFKTDIVIGANGFPA
ILYAEDDAIATLKYVQCHNITCSVSTITTLDEEVYGSFAGKMIVGGDNKVIIAYNKLIHHLSVELKFKYCNNEACSDVTT
TQIYINPADIFSYILDITINSNNYPIISFYDIVQDHLLVAQCNTFNCSDYTINLVDSIGAESGTMSSIMIGFDGLPLIVY
HIRPIAGVHDNDDLRIAHCENIACSSATITTITAHLGTFLGYHPTIKKGADNLGLFIYFDLINTNLRVVHCANILCTKEG
QADFAQYLALVQAPITTFSLLINQQTIPVQPVAQQGQVFYQTTINVPSIVPTGGSFVLSADPDGQTPSLVDDAVVFKLNN
QEVFRFEYTGSIAPSPTLVTIPNSLVAQWAGQTLTVEFHDRFAGQIQASTMYLVWLP

Sequences:

>Translated_537_residues
MRSFRAGYRLLALLLLLTLGFAPADQATLAQTPPIGSLVDANGDVGETSDLVIGQDGLGLIAYYDTTNQDLKVAHCKNLQ
CSQSSRAIIDSQYNVGKYGSIVIGNDGLGVIAYMDLTNRTLKIAHCQNVECSSATISTITSTLWVTFKTDIVIGANGFPA
ILYAEDDAIATLKYVQCHNITCSVSTITTLDEEVYGSFAGKMIVGGDNKVIIAYNKLIHHLSVELKFKYCNNEACSDVTT
TQIYINPADIFSYILDITINSNNYPIISFYDIVQDHLLVAQCNTFNCSDYTINLVDSIGAESGTMSSIMIGFDGLPLIVY
HIRPIAGVHDNDDLRIAHCENIACSSATITTITAHLGTFLGYHPTIKKGADNLGLFIYFDLINTNLRVVHCANILCTKEG
QADFAQYLALVQAPITTFSLLINQQTIPVQPVAQQGQVFYQTTINVPSIVPTGGSFVLSADPDGQTPSLVDDAVVFKLNN
QEVFRFEYTGSIAPSPTLVTIPNSLVAQWAGQTLTVEFHDRFAGQIQASTMYLVWLP
>Mature_537_residues
MRSFRAGYRLLALLLLLTLGFAPADQATLAQTPPIGSLVDANGDVGETSDLVIGQDGLGLIAYYDTTNQDLKVAHCKNLQ
CSQSSRAIIDSQYNVGKYGSIVIGNDGLGVIAYMDLTNRTLKIAHCQNVECSSATISTITSTLWVTFKTDIVIGANGFPA
ILYAEDDAIATLKYVQCHNITCSVSTITTLDEEVYGSFAGKMIVGGDNKVIIAYNKLIHHLSVELKFKYCNNEACSDVTT
TQIYINPADIFSYILDITINSNNYPIISFYDIVQDHLLVAQCNTFNCSDYTINLVDSIGAESGTMSSIMIGFDGLPLIVY
HIRPIAGVHDNDDLRIAHCENIACSSATITTITAHLGTFLGYHPTIKKGADNLGLFIYFDLINTNLRVVHCANILCTKEG
QADFAQYLALVQAPITTFSLLINQQTIPVQPVAQQGQVFYQTTINVPSIVPTGGSFVLSADPDGQTPSLVDDAVVFKLNN
QEVFRFEYTGSIAPSPTLVTIPNSLVAQWAGQTLTVEFHDRFAGQIQASTMYLVWLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58357; Mature: 58357

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFRAGYRLLALLLLLTLGFAPADQATLAQTPPIGSLVDANGDVGETSDLVIGQDGLGL
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCEE
IAYYDTTNQDLKVAHCKNLQCSQSSRAIIDSQYNVGKYGSIVIGNDGLGVIAYMDLTNRT
EEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCE
LKIAHCQNVECSSATISTITSTLWVTFKTDIVIGANGFPAILYAEDDAIATLKYVQCHNI
EEEEEECCCCCCCCHHHEEEEEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEEECE
TCSVSTITTLDEEVYGSFAGKMIVGGDNKVIIAYNKLIHHLSVELKFKYCNNEACSDVTT
EEEEEEEEHHHHHHHHHHCCEEEECCCCEEEEEEHHHHEEEEEEEEEEECCCCCCCCCEE
TQIYINPADIFSYILDITINSNNYPIISFYDIVQDHLLVAQCNTFNCSDYTINLVDSIGA
EEEEEEHHHHEEEEEEEEECCCCCEEEEEHHHHHCCEEEEECCCCCCCCEEEEEEHHCCC
ESGTMSSIMIGFDGLPLIVYHIRPIAGVHDNDDLRIAHCENIACSSATITTITAHLGTFL
CCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHH
GYHPTIKKGADNLGLFIYFDLINTNLRVVHCANILCTKEGQADFAQYLALVQAPITTFSL
CCCCCHHCCCCCCEEEEEEEEECCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCHHEEEE
LINQQTIPVQPVAQQGQVFYQTTINVPSIVPTGGSFVLSADPDGQTPSLVDDAVVFKLNN
EECCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCEEEEEECC
QEVFRFEYTGSIAPSPTLVTIPNSLVAQWAGQTLTVEFHDRFAGQIQASTMYLVWLP
CEEEEEEEECCCCCCCEEEECCHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEEEEC
>Mature Secondary Structure
MRSFRAGYRLLALLLLLTLGFAPADQATLAQTPPIGSLVDANGDVGETSDLVIGQDGLGL
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCEE
IAYYDTTNQDLKVAHCKNLQCSQSSRAIIDSQYNVGKYGSIVIGNDGLGVIAYMDLTNRT
EEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCE
LKIAHCQNVECSSATISTITSTLWVTFKTDIVIGANGFPAILYAEDDAIATLKYVQCHNI
EEEEEECCCCCCCCHHHEEEEEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEEECE
TCSVSTITTLDEEVYGSFAGKMIVGGDNKVIIAYNKLIHHLSVELKFKYCNNEACSDVTT
EEEEEEEEHHHHHHHHHHCCEEEECCCCEEEEEEHHHHEEEEEEEEEEECCCCCCCCCEE
TQIYINPADIFSYILDITINSNNYPIISFYDIVQDHLLVAQCNTFNCSDYTINLVDSIGA
EEEEEEHHHHEEEEEEEEECCCCCEEEEEHHHHHCCEEEEECCCCCCCCEEEEEEHHCCC
ESGTMSSIMIGFDGLPLIVYHIRPIAGVHDNDDLRIAHCENIACSSATITTITAHLGTFL
CCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHH
GYHPTIKKGADNLGLFIYFDLINTNLRVVHCANILCTKEGQADFAQYLALVQAPITTFSL
CCCCCHHCCCCCCEEEEEEEEECCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCHHEEEE
LINQQTIPVQPVAQQGQVFYQTTINVPSIVPTGGSFVLSADPDGQTPSLVDDAVVFKLNN
EECCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCEEEEEECC
QEVFRFEYTGSIAPSPTLVTIPNSLVAQWAGQTLTVEFHDRFAGQIQASTMYLVWLP
CEEEEEEEECCCCCCCEEEECCHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA