| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897647
Identifier: 159897647
GI number: 159897647
Start: 1280841
End: 1281461
Strand: Direct
Name: 159897647
Synonym: Haur_1118
Alternate gene names: NA
Gene position: 1280841-1281461 (Clockwise)
Preceding gene: 159897646
Following gene: 159897648
Centisome position: 20.18
GC content: 47.02
Gene sequence:
>621_bases ATGTTTATCGGAATGTATCTTGCAATCTGGTTGGCGCTGGCAGGGGCAATTTGGTGGTCGATCCGCTCCAAAAATTCAAT TGGGCGCATGCAGCATTTATTGGGCATTAGCCTGATCGAGCCAATTATCACGGTAATTATGCTGATTGGGATGTATCCGG TGTTGTTAGAATGGGCTTGGCAAGAAAACATGATTAGTATTGCTAGCTATCAGTTGATCAACTCGAATGATGTGCTGAAT AGCGTGCTTGCTACAGTTTCAGTTGGGCTGGCCTTGCTGCCATTGCTGTTGCTGTTTGATGAGCAAGCTGTCGTGCGTAG TGTTGCTTGGCAAGCAGGCTTGATAGGTTTATTCCGTTGGGGATGTTTGTTGGGCCTAGGCTTTCTTTTGAGTGCTGATT TGCATCCATGGATCAATACCTTCTTGGTCGTTGGCTATCTGATTATGATTGCGCTGACGATTTATCTGCTGAATGCCAAA TTGCGCGGGCGCTTGGATCAAGCAGGTTCGCCGTTGCCCGTTGAAACCGAGCAATTATTTCAAGGCCAGCCGATCGTCTA TGTAGACCCAAATCTGCAACCAATGATCATGATCGATCCGCCCAAGGATGAAGGTAAGTGA
Upstream 100 bases:
>100_bases CTAAGCAATTTGAACGCCGACATGGATGCGTTTCAGCATGTTTTAGAAGGCGCTATGTCACAAAGTGGCGTAGCCTAGGT TTATAACGAGGGAGAATTGA
Downstream 100 bases:
>100_bases TGGTGCTATACTAACCAGCATTACAGGATATCGACTCAACGACGCTGCGGTATACTAATCGCACGTCGTTGTTGCGTTTT AGAGGATGGTTCATGACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MFIGMYLAIWLALAGAIWWSIRSKNSIGRMQHLLGISLIEPIITVIMLIGMYPVLLEWAWQENMISIASYQLINSNDVLN SVLATVSVGLALLPLLLLFDEQAVVRSVAWQAGLIGLFRWGCLLGLGFLLSADLHPWINTFLVVGYLIMIALTIYLLNAK LRGRLDQAGSPLPVETEQLFQGQPIVYVDPNLQPMIMIDPPKDEGK
Sequences:
>Translated_206_residues MFIGMYLAIWLALAGAIWWSIRSKNSIGRMQHLLGISLIEPIITVIMLIGMYPVLLEWAWQENMISIASYQLINSNDVLN SVLATVSVGLALLPLLLLFDEQAVVRSVAWQAGLIGLFRWGCLLGLGFLLSADLHPWINTFLVVGYLIMIALTIYLLNAK LRGRLDQAGSPLPVETEQLFQGQPIVYVDPNLQPMIMIDPPKDEGK >Mature_206_residues MFIGMYLAIWLALAGAIWWSIRSKNSIGRMQHLLGISLIEPIITVIMLIGMYPVLLEWAWQENMISIASYQLINSNDVLN SVLATVSVGLALLPLLLLFDEQAVVRSVAWQAGLIGLFRWGCLLGLGFLLSADLHPWINTFLVVGYLIMIALTIYLLNAK LRGRLDQAGSPLPVETEQLFQGQPIVYVDPNLQPMIMIDPPKDEGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22944; Mature: 22944
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIGMYLAIWLALAGAIWWSIRSKNSIGRMQHLLGISLIEPIITVIMLIGMYPVLLEWAW CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QENMISIASYQLINSNDVLNSVLATVSVGLALLPLLLLFDEQAVVRSVAWQAGLIGLFRW HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH GCLLGLGFLLSADLHPWINTFLVVGYLIMIALTIYLLNAKLRGRLDQAGSPLPVETEQLF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHH QGQPIVYVDPNLQPMIMIDPPKDEGK CCCCEEEECCCCCEEEEECCCCCCCC >Mature Secondary Structure MFIGMYLAIWLALAGAIWWSIRSKNSIGRMQHLLGISLIEPIITVIMLIGMYPVLLEWAW CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QENMISIASYQLINSNDVLNSVLATVSVGLALLPLLLLFDEQAVVRSVAWQAGLIGLFRW HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH GCLLGLGFLLSADLHPWINTFLVVGYLIMIALTIYLLNAKLRGRLDQAGSPLPVETEQLF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHH QGQPIVYVDPNLQPMIMIDPPKDEGK CCCCEEEECCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA