Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897646

Identifier: 159897646

GI number: 159897646

Start: 1280144

End: 1280818

Strand: Direct

Name: 159897646

Synonym: Haur_1117

Alternate gene names: NA

Gene position: 1280144-1280818 (Clockwise)

Preceding gene: 159897645

Following gene: 159897647

Centisome position: 20.17

GC content: 49.04

Gene sequence:

>675_bases
ATGGCGCTAACAATTTATCCATGGTTGATTGTGGTTGCGATTATCGCCTATGCCCTGATGGTCTGGATGTTGGCGAATGA
TCCGAATATTTTAGTGCAAAAGCAAGAAGCGCCAAAATTGGCCAAAATTACTAGCCGCACCTTTCAATCGCATTTGGAAG
CGATCGATCGCACGCGCCGCGAGATTGTGCGCTCCACCAATGTGACTGCTGGCCCGTTGCAGCGCCTGCTCCAGCCAATT
GCTGATCAAGCCAATGAATTATTTCAGCAAGCTCATGGGTTAGCCGATAAAGGCCAATTGATCGAGCAATATTTGCAAAC
CTCGCAACCGCATGGCTTGCAACCCCAAATCGACAACCTTGATCAACGGATCGCCATGACCAAGGATAGCTATACGGTTG
ATCAATTGAAAGAAACGCGGGCGGCCTTGATTGATCGTCAGCAAAATGCCCAAGCTTTAGCAACCTACTATGATCGGATT
ACGGCTCAGTTGCAAAATATTGCGGCTAACCTTGATAATGTCTTGGCTGAAACCGTGCGTTTGCGAGCATCCGAGGCGGC
TAGTGCCACTCAAACCTCGCAAGAAGTTGCCGAACGGCTAAGCAATTTGAACGCCGACATGGATGCGTTTCAGCATGTTT
TAGAAGGCGCTATGTCACAAAGTGGCGTAGCCTAG

Upstream 100 bases:

>100_bases
TTTCTAGAGAAATGGATCGCGCATTATGAATTCACGCCACCCTTTACAAGTTGCCGCCACCAAACCACTGCCCTTGATTG
TTTTGGCAATCGGGGTGGTT

Downstream 100 bases:

>100_bases
GTTTATAACGAGGGAGAATTGAATGTTTATCGGAATGTATCTTGCAATCTGGTTGGCGCTGGCAGGGGCAATTTGGTGGT
CGATCCGCTCCAAAAATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MALTIYPWLIVVAIIAYALMVWMLANDPNILVQKQEAPKLAKITSRTFQSHLEAIDRTRREIVRSTNVTAGPLQRLLQPI
ADQANELFQQAHGLADKGQLIEQYLQTSQPHGLQPQIDNLDQRIAMTKDSYTVDQLKETRAALIDRQQNAQALATYYDRI
TAQLQNIAANLDNVLAETVRLRASEAASATQTSQEVAERLSNLNADMDAFQHVLEGAMSQSGVA

Sequences:

>Translated_224_residues
MALTIYPWLIVVAIIAYALMVWMLANDPNILVQKQEAPKLAKITSRTFQSHLEAIDRTRREIVRSTNVTAGPLQRLLQPI
ADQANELFQQAHGLADKGQLIEQYLQTSQPHGLQPQIDNLDQRIAMTKDSYTVDQLKETRAALIDRQQNAQALATYYDRI
TAQLQNIAANLDNVLAETVRLRASEAASATQTSQEVAERLSNLNADMDAFQHVLEGAMSQSGVA
>Mature_223_residues
ALTIYPWLIVVAIIAYALMVWMLANDPNILVQKQEAPKLAKITSRTFQSHLEAIDRTRREIVRSTNVTAGPLQRLLQPIA
DQANELFQQAHGLADKGQLIEQYLQTSQPHGLQPQIDNLDQRIAMTKDSYTVDQLKETRAALIDRQQNAQALATYYDRIT
AQLQNIAANLDNVLAETVRLRASEAASATQTSQEVAERLSNLNADMDAFQHVLEGAMSQSGVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24922; Mature: 24790

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTIYPWLIVVAIIAYALMVWMLANDPNILVQKQEAPKLAKITSRTFQSHLEAIDRTRR
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
EIVRSTNVTAGPLQRLLQPIADQANELFQQAHGLADKGQLIEQYLQTSQPHGLQPQIDNL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHH
DQRIAMTKDSYTVDQLKETRAALIDRQQNAQALATYYDRITAQLQNIAANLDNVLAETVR
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRASEAASATQTSQEVAERLSNLNADMDAFQHVLEGAMSQSGVA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ALTIYPWLIVVAIIAYALMVWMLANDPNILVQKQEAPKLAKITSRTFQSHLEAIDRTRR
CEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
EIVRSTNVTAGPLQRLLQPIADQANELFQQAHGLADKGQLIEQYLQTSQPHGLQPQIDNL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHH
DQRIAMTKDSYTVDQLKETRAALIDRQQNAQALATYYDRITAQLQNIAANLDNVLAETVR
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRASEAASATQTSQEVAERLSNLNADMDAFQHVLEGAMSQSGVA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA