Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897601
Identifier: 159897601
GI number: 159897601
Start: 1223301
End: 1223810
Strand: Direct
Name: 159897601
Synonym: Haur_1072
Alternate gene names: NA
Gene position: 1223301-1223810 (Clockwise)
Preceding gene: 159897600
Following gene: 159897602
Centisome position: 19.27
GC content: 48.82
Gene sequence:
>510_bases ATGGCAACCTTGGTAAATAAGCATTCGGCAGTCGTAACGCTGCCAACCGACACCCAAATTCAAATTAATCGTGATTTTAA TGTGCCAAAAGAGCTGGTGTATCGTGCTTGGACGACTCCAGAGTTGGTTAAACGTTGGTGGTCGGCGGGCCATGGCACGG TCACAATTGCCGATATTGATCTCCAGGTTGGTGGAATGTGGCGTTGGGTAACCGTGACGGAAACGGGCTTTGAGGTGGCT TTTCATGGGGTTTATCAGCAGCTCACTCCTAATGAATTGATTGTTTGTACCGAAGTCTACGAAGCCATGCCCGATGGTGA AGCGCTCAATACGATAACTTTTAGCGACCGTGATGGTGGCTCAAGTTTGACCCTGCTGGTGCAACATAGCTGTCAAGAAC ATCGCGATGGTCATGTTAATTCGGGTATGGAAGCGGGCATGCAAAGTGCACTCGATATGTTGGAAAGCGCTGCCTTGGAA TTGCTCGAAGCATCAACAATCAAGGCCTAA
Upstream 100 bases:
>100_bases CAATTCACGACTGGATTCGCCGCTATGAACAAATGTGGAATGAGCGGTTTGATGCTTTGGATGAATTGCTCGAAGAACTG AATCATGAGGAGGATTAACC
Downstream 100 bases:
>100_bases ATTCAAAATCCCTACTCTAGCGAAAGGATGCGATTGATGGCAACTGTGATGAGTGCTCCATCAAAGCCAATTATATGGAC AAGCCGGATTTTGCGGGGGT
Product: activator of Hsp90 ATPase 1 family protein
Products: NA
Alternate protein names: Hsp90 ATPase Activator Family Protein
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MATLVNKHSAVVTLPTDTQIQINRDFNVPKELVYRAWTTPELVKRWWSAGHGTVTIADIDLQVGGMWRWVTVTETGFEVA FHGVYQQLTPNELIVCTEVYEAMPDGEALNTITFSDRDGGSSLTLLVQHSCQEHRDGHVNSGMEAGMQSALDMLESAALE LLEASTIKA
Sequences:
>Translated_169_residues MATLVNKHSAVVTLPTDTQIQINRDFNVPKELVYRAWTTPELVKRWWSAGHGTVTIADIDLQVGGMWRWVTVTETGFEVA FHGVYQQLTPNELIVCTEVYEAMPDGEALNTITFSDRDGGSSLTLLVQHSCQEHRDGHVNSGMEAGMQSALDMLESAALE LLEASTIKA >Mature_168_residues ATLVNKHSAVVTLPTDTQIQINRDFNVPKELVYRAWTTPELVKRWWSAGHGTVTIADIDLQVGGMWRWVTVTETGFEVAF HGVYQQLTPNELIVCTEVYEAMPDGEALNTITFSDRDGGSSLTLLVQHSCQEHRDGHVNSGMEAGMQSALDMLESAALEL LEASTIKA
Specific function: Unknown
COG id: COG3832
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18661; Mature: 18530
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLVNKHSAVVTLPTDTQIQINRDFNVPKELVYRAWTTPELVKRWWSAGHGTVTIADID CCCEECCCCEEEECCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEE LQVGGMWRWVTVTETGFEVAFHGVYQQLTPNELIVCTEVYEAMPDGEALNTITFSDRDGG EEECCEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCEEEEEECCCCCC SSLTLLVQHSCQEHRDGHVNSGMEAGMQSALDMLESAALELLEASTIKA CEEEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATLVNKHSAVVTLPTDTQIQINRDFNVPKELVYRAWTTPELVKRWWSAGHGTVTIADID CCEECCCCEEEECCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEE LQVGGMWRWVTVTETGFEVAFHGVYQQLTPNELIVCTEVYEAMPDGEALNTITFSDRDGG EEECCEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCEEEEEECCCCCC SSLTLLVQHSCQEHRDGHVNSGMEAGMQSALDMLESAALELLEASTIKA CEEEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA