Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897602
Identifier: 159897602
GI number: 159897602
Start: 1223847
End: 1224251
Strand: Direct
Name: 159897602
Synonym: Haur_1073
Alternate gene names: NA
Gene position: 1223847-1224251 (Clockwise)
Preceding gene: 159897601
Following gene: 159897607
Centisome position: 19.28
GC content: 52.35
Gene sequence:
>405_bases ATGGCAACTGTGATGAGTGCTCCATCAAAGCCAATTATATGGACAAGCCGGATTTTGCGGGGGTTGGCAGCGGCGTTTCT GCTGTTTGATGGGAGTTTCAAGCTATTTAATCCTGCGCCTGTGGCTAAATCGTTTGCGGCACTGGGCTACCCCGCTGGAA TTGCCTTGAGTTTAGGGATTTTGTTGCTGGTTTGTACCGTTTTGGCGATCATTCCGCGCACAGCCGTGTTAGGAACGGTG CTGCTGACTGGCTACTTTGGTGGAGCGATTGCCAGCCATGTGCGCGTAGGCGACCCGCTCTTTTCGCTGGTGTTTCCACT GATTCTTGGCGGCATGCTGTGGGGTGGCCTATATCTGAGCGATCAACGGCTGCGAGCAATTTTTCCATTACGAGAACACG ATTAA
Upstream 100 bases:
>100_bases TGCACTCGATATGTTGGAAAGCGCTGCCTTGGAATTGCTCGAAGCATCAACAATCAAGGCCTAAATTCAAAATCCCTACT CTAGCGAAAGGATGCGATTG
Downstream 100 bases:
>100_bases TCATTGATTGAGTTCAAATGCTTGATTGGGCTGCCCTCTTTACTTGGATTGAGGGTAGCCCAACTTTTAATCATCAAGGT ATTCAGTTTGATAGGCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MATVMSAPSKPIIWTSRILRGLAAAFLLFDGSFKLFNPAPVAKSFAALGYPAGIALSLGILLLVCTVLAIIPRTAVLGTV LLTGYFGGAIASHVRVGDPLFSLVFPLILGGMLWGGLYLSDQRLRAIFPLREHD
Sequences:
>Translated_134_residues MATVMSAPSKPIIWTSRILRGLAAAFLLFDGSFKLFNPAPVAKSFAALGYPAGIALSLGILLLVCTVLAIIPRTAVLGTV LLTGYFGGAIASHVRVGDPLFSLVFPLILGGMLWGGLYLSDQRLRAIFPLREHD >Mature_133_residues ATVMSAPSKPIIWTSRILRGLAAAFLLFDGSFKLFNPAPVAKSFAALGYPAGIALSLGILLLVCTVLAIIPRTAVLGTVL LTGYFGGAIASHVRVGDPLFSLVFPLILGGMLWGGLYLSDQRLRAIFPLREHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14225; Mature: 14094
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVMSAPSKPIIWTSRILRGLAAAFLLFDGSFKLFNPAPVAKSFAALGYPAGIALSLGI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH LLLVCTVLAIIPRTAVLGTVLLTGYFGGAIASHVRVGDPLFSLVFPLILGGMLWGGLYLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHCC DQRLRAIFPLREHD CCHHHHHCCCCCCC >Mature Secondary Structure ATVMSAPSKPIIWTSRILRGLAAAFLLFDGSFKLFNPAPVAKSFAALGYPAGIALSLGI CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH LLLVCTVLAIIPRTAVLGTVLLTGYFGGAIASHVRVGDPLFSLVFPLILGGMLWGGLYLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHCC DQRLRAIFPLREHD CCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA