Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is arsR [C]
Identifier: 159897600
GI number: 159897600
Start: 1222963
End: 1223298
Strand: Direct
Name: arsR [C]
Synonym: Haur_1071
Alternate gene names: 159897600
Gene position: 1222963-1223298 (Clockwise)
Preceding gene: 159897599
Following gene: 159897601
Centisome position: 19.27
GC content: 49.11
Gene sequence:
>336_bases ATGGCACGTGCAGCAACAACAACTGATGTTTTCAATGCGATCGCAGAACCTGGTCGGCGGCAAATTCTTGACTTACTGGT GAATGGCGAATTATCAGTCAACGAGCTGGTAGAGCAGCTTGGGCTGGCTCAGCCACAGGTTTCCAAACGACTTCATGTCT TGCGTGAAGTTGGGTTGGTACTGGTGCGTGATGATGGGCGACAGCGTTACTATCGCTTGAATGGTCGCGCCCTCAAACCA ATTCACGACTGGATTCGCCGCTATGAACAAATGTGGAATGAGCGGTTTGATGCTTTGGATGAATTGCTCGAAGAACTGAA TCATGAGGAGGATTAA
Upstream 100 bases:
>100_bases GCTAGCCTAAAGCCCATAGCCGATAGCCACATTACGAGATTGGTTGCTAAAATAGCAAATTCGTTCTTGATATATTCCCA TATTGGTATATAATAAATAT
Downstream 100 bases:
>100_bases CCATGGCAACCTTGGTAAATAAGCATTCGGCAGTCGTAACGCTGCCAACCGACACCCAAATTCAAATTAATCGTGATTTT AATGTGCCAAAAGAGCTGGT
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Transcriptional Regulator; Regulatory Protein ArsR; Transcriptional Regulator TrmB; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator Arsr Domain Protein; Arsenical Resistance Operon Repressor; ArsR Family Regulatory Protein; ArsR-Type Repressor; ArsR Family xin-Antitoxin System Antitoxin Component; HTH Family Transcriptional Regulator; ArsR Family Protein Transcriptional Regulator
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MARAATTTDVFNAIAEPGRRQILDLLVNGELSVNELVEQLGLAQPQVSKRLHVLREVGLVLVRDDGRQRYYRLNGRALKP IHDWIRRYEQMWNERFDALDELLEELNHEED
Sequences:
>Translated_111_residues MARAATTTDVFNAIAEPGRRQILDLLVNGELSVNELVEQLGLAQPQVSKRLHVLREVGLVLVRDDGRQRYYRLNGRALKP IHDWIRRYEQMWNERFDALDELLEELNHEED >Mature_110_residues ARAATTTDVFNAIAEPGRRQILDLLVNGELSVNELVEQLGLAQPQVSKRLHVLREVGLVLVRDDGRQRYYRLNGRALKPI HDWIRRYEQMWNERFDALDELLEELNHEED
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13007; Mature: 12876
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAATTTDVFNAIAEPGRRQILDLLVNGELSVNELVEQLGLAQPQVSKRLHVLREVGLV CCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCEE LVRDDGRQRYYRLNGRALKPIHDWIRRYEQMWNERFDALDELLEELNHEED EECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ARAATTTDVFNAIAEPGRRQILDLLVNGELSVNELVEQLGLAQPQVSKRLHVLREVGLV CCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCEE LVRDDGRQRYYRLNGRALKPIHDWIRRYEQMWNERFDALDELLEELNHEED EECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA