Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897559
Identifier: 159897559
GI number: 159897559
Start: 1175933
End: 1176970
Strand: Reverse
Name: 159897559
Synonym: Haur_1030
Alternate gene names: NA
Gene position: 1176970-1175933 (Counterclockwise)
Preceding gene: 159897560
Following gene: 159897558
Centisome position: 18.54
GC content: 48.07
Gene sequence:
>1038_bases GTGGCAGACCCAAACCAAATCTCATTTTTAGCGCGAGTTCAGCGCCGCTTGCGCTACGATTGGCAAAGCAAATTTTTGCC GCGCTGGTGGCATTTAAACTTACACCTACGCAAACCCACGATCCGACGAGTATTAGGCTTTGGCGGTGGCCTTGGCGATC AATTGTTATGCACAGCGATTTTTCGAGCCTTGCGCGAACATGACGAAGCCGATCTTTGGATGCAAACCAATAATCCTGAA TTATTCGCGCATAACCCCGATATTGCTGGAATAATTCCGGTGATGCCCTATTATTTTAAAATCATTGAACAGCATGGATT GCCATTCAAACGGCTTAATTATACGACCCATATTAAAGAACAAGCCCGCGATTTACCACCACAGCAACATCTGATTACCA ATATGGCTTCGGTTTTGGGAATCGATTATCCTGTGGGTGTGCGGCCTTATCTGCACTTAACTGAGACTGAACGTACTCAA CACATTATTTCCAAGCCCTATATTGCAGTCCAAAGCTCAATTTTGGCAGCACGCTACCCAATTGCCACCAAAGAGTGGTA TCCCGAACGCATGCAAGTTGTAGTCAATCAATTAGCCAAACACTTTACGATTGTGCAACTTGGCATGCCCAGCGACCCCA AACTTGAGCATGTGATCGATCTGCGGGGCAAAGCCAGCATCCGCGAATCGGCGGCAATTTTGCAAGCGGCGCAGCTCTTT ATTGGCTTTGTCGGCTTTCAGATGCACTTAGCACGGGCGGTGGATTGCCGCTCGGTGATTATTTTTGGTGGTCGTGAAGC GCCGTTTCAATCGGGCTATAGCTGCAACAGCAATTTGTACACGCCATTAAGTTGTGCGCCCTGCTGGCTCTGGGAGAATT GCCCAATCGAGCGCCAATGTATGCAGGAAATTACGCCAGAAATGGTCTTGGCGGCGGTCGAAGAACAATTAGGCTTAGTT GGCCAGCCATTGAAAATCGATTATATCAAGCCCCGCCCAGCCCATGAATTGATCGAATTGGAGATTCATTGTGCATGA
Upstream 100 bases:
>100_bases GCTTGCTGCGCGAATTAGGCCAAACCAAATTTATTCATGAAAACCCCGATGTTGATATTTATTCGTGGGAACTGGTGTGC GAGAAAATTGAGGCCTAGTT
Downstream 100 bases:
>100_bases ATTAACTGCCACGCTAGCCAAATTAAGCCAACAACGGGTCTTAATTGTTGGCGATGTTATGCTCGATGAATATATTTGGG GCGATGTGACCCGCATTTCG
Product: ADP-heptose:LPS heptosyltransferase-like protein
Products: NA
Alternate protein names: ADP-Heptose-LPS Heptosyltransferase II
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MADPNQISFLARVQRRLRYDWQSKFLPRWWHLNLHLRKPTIRRVLGFGGGLGDQLLCTAIFRALREHDEADLWMQTNNPE LFAHNPDIAGIIPVMPYYFKIIEQHGLPFKRLNYTTHIKEQARDLPPQQHLITNMASVLGIDYPVGVRPYLHLTETERTQ HIISKPYIAVQSSILAARYPIATKEWYPERMQVVVNQLAKHFTIVQLGMPSDPKLEHVIDLRGKASIRESAAILQAAQLF IGFVGFQMHLARAVDCRSVIIFGGREAPFQSGYSCNSNLYTPLSCAPCWLWENCPIERQCMQEITPEMVLAAVEEQLGLV GQPLKIDYIKPRPAHELIELEIHCA
Sequences:
>Translated_345_residues MADPNQISFLARVQRRLRYDWQSKFLPRWWHLNLHLRKPTIRRVLGFGGGLGDQLLCTAIFRALREHDEADLWMQTNNPE LFAHNPDIAGIIPVMPYYFKIIEQHGLPFKRLNYTTHIKEQARDLPPQQHLITNMASVLGIDYPVGVRPYLHLTETERTQ HIISKPYIAVQSSILAARYPIATKEWYPERMQVVVNQLAKHFTIVQLGMPSDPKLEHVIDLRGKASIRESAAILQAAQLF IGFVGFQMHLARAVDCRSVIIFGGREAPFQSGYSCNSNLYTPLSCAPCWLWENCPIERQCMQEITPEMVLAAVEEQLGLV GQPLKIDYIKPRPAHELIELEIHCA >Mature_344_residues ADPNQISFLARVQRRLRYDWQSKFLPRWWHLNLHLRKPTIRRVLGFGGGLGDQLLCTAIFRALREHDEADLWMQTNNPEL FAHNPDIAGIIPVMPYYFKIIEQHGLPFKRLNYTTHIKEQARDLPPQQHLITNMASVLGIDYPVGVRPYLHLTETERTQH IISKPYIAVQSSILAARYPIATKEWYPERMQVVVNQLAKHFTIVQLGMPSDPKLEHVIDLRGKASIRESAAILQAAQLFI GFVGFQMHLARAVDCRSVIIFGGREAPFQSGYSCNSNLYTPLSCAPCWLWENCPIERQCMQEITPEMVLAAVEEQLGLVG QPLKIDYIKPRPAHELIELEIHCA
Specific function: Unknown
COG id: COG0859
COG function: function code M; ADP-heptose:LPS heptosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39577; Mature: 39445
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPNQISFLARVQRRLRYDWQSKFLPRWWHLNLHLRKPTIRRVLGFGGGLGDQLLCTAI CCCCHHHHHHHHHHHHHHCCHHHCCCCEEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHH FRALREHDEADLWMQTNNPELFAHNPDIAGIIPVMPYYFKIIEQHGLPFKRLNYTTHIKE HHHHHCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHH QARDLPPQQHLITNMASVLGIDYPVGVRPYLHLTETERTQHIISKPYIAVQSSILAARYP HHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHCC IATKEWYPERMQVVVNQLAKHFTIVQLGMPSDPKLEHVIDLRGKASIRESAAILQAAQLF CCCHHCCHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH IGFVGFQMHLARAVDCRSVIIFGGREAPFQSGYSCNSNLYTPLSCAPCWLWENCPIERQC HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHH MQEITPEMVLAAVEEQLGLVGQPLKIDYIKPRPAHELIELEIHCA HHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEEEC >Mature Secondary Structure ADPNQISFLARVQRRLRYDWQSKFLPRWWHLNLHLRKPTIRRVLGFGGGLGDQLLCTAI CCCHHHHHHHHHHHHHHCCHHHCCCCEEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHH FRALREHDEADLWMQTNNPELFAHNPDIAGIIPVMPYYFKIIEQHGLPFKRLNYTTHIKE HHHHHCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHH QARDLPPQQHLITNMASVLGIDYPVGVRPYLHLTETERTQHIISKPYIAVQSSILAARYP HHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHCC IATKEWYPERMQVVVNQLAKHFTIVQLGMPSDPKLEHVIDLRGKASIRESAAILQAAQLF CCCHHCCHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH IGFVGFQMHLARAVDCRSVIIFGGREAPFQSGYSCNSNLYTPLSCAPCWLWENCPIERQC HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHH MQEITPEMVLAAVEEQLGLVGQPLKIDYIKPRPAHELIELEIHCA HHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA