Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897560
Identifier: 159897560
GI number: 159897560
Start: 1176973
End: 1177647
Strand: Reverse
Name: 159897560
Synonym: Haur_1031
Alternate gene names: NA
Gene position: 1177647-1176973 (Counterclockwise)
Preceding gene: 159897561
Following gene: 159897559
Centisome position: 18.56
GC content: 46.81
Gene sequence:
>675_bases ATGACTAAATATATTGCTCGCACACGCCAAATTGTTTGGAAAAATTATCTGCGGGCTTTGCCAGCATTAAAAACTGTCAG CCGTGCCTTAGGGATCGAAAATGCTGCTCGTTCGGCGATGCGCACCATTTTGCCCAAAATTCAGGCTAAACGCACCAGTA AATGGGCTTGGGCCAGCGAAACATCCAAATGCCGCGCTCGGCTTGACCCATTTTGTGTCGGTTATGGCTTAGATTTAGGC TTTGGTGGCGACCCAATCAACCCTCGGGCGGTGCGGGTCGATTTACCGCAACCTTATACTGCGGTTGGTCAATATCCAGT GCAATTGGGCGGCGATGCCGATCATTTATATTGGTTTGCCGATAATGTGATCGATTATATTTATTCATCGCATTTGCTCG AAGATTTCGACGATACCAAAGCGGCGCTAAAAGAATGGCTACGCGTATTAAAAGTTGGTGGTCGTTTGGTGATTTTCTGC CCCGATGAACAACGCTTTCGCGTCCATTGCCAAAAAACTGGCCAGCCCTATAATCCTCATCACAAGCATGCCCATTTTTC GCTAGAGTTTGTCAAAGGCTTGCTGCGCGAATTAGGCCAAACCAAATTTATTCATGAAAACCCCGATGTTGATATTTATT CGTGGGAACTGGTGTGCGAGAAAATTGAGGCCTAG
Upstream 100 bases:
>100_bases AACCAAGCCACCCAGATTGTCGATCGCGAGTTTCGCATGAGCACCATGATCGATCGGGTTGAAGCAGCGCTCTATGCTGC CTGTAACAAGGATTCGCACC
Downstream 100 bases:
>100_bases TTGTGGCAGACCCAAACCAAATCTCATTTTTAGCGCGAGTTCAGCGCCGCTTGCGCTACGATTGGCAAAGCAAATTTTTG CCGCGCTGGTGGCATTTAAA
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTKYIARTRQIVWKNYLRALPALKTVSRALGIENAARSAMRTILPKIQAKRTSKWAWASETSKCRARLDPFCVGYGLDLG FGGDPINPRAVRVDLPQPYTAVGQYPVQLGGDADHLYWFADNVIDYIYSSHLLEDFDDTKAALKEWLRVLKVGGRLVIFC PDEQRFRVHCQKTGQPYNPHHKHAHFSLEFVKGLLRELGQTKFIHENPDVDIYSWELVCEKIEA
Sequences:
>Translated_224_residues MTKYIARTRQIVWKNYLRALPALKTVSRALGIENAARSAMRTILPKIQAKRTSKWAWASETSKCRARLDPFCVGYGLDLG FGGDPINPRAVRVDLPQPYTAVGQYPVQLGGDADHLYWFADNVIDYIYSSHLLEDFDDTKAALKEWLRVLKVGGRLVIFC PDEQRFRVHCQKTGQPYNPHHKHAHFSLEFVKGLLRELGQTKFIHENPDVDIYSWELVCEKIEA >Mature_223_residues TKYIARTRQIVWKNYLRALPALKTVSRALGIENAARSAMRTILPKIQAKRTSKWAWASETSKCRARLDPFCVGYGLDLGF GGDPINPRAVRVDLPQPYTAVGQYPVQLGGDADHLYWFADNVIDYIYSSHLLEDFDDTKAALKEWLRVLKVGGRLVIFCP DEQRFRVHCQKTGQPYNPHHKHAHFSLEFVKGLLRELGQTKFIHENPDVDIYSWELVCEKIEA
Specific function: Unknown
COG id: COG4627
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25702; Mature: 25571
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYIARTRQIVWKNYLRALPALKTVSRALGIENAARSAMRTILPKIQAKRTSKWAWASE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC TSKCRARLDPFCVGYGLDLGFGGDPINPRAVRVDLPQPYTAVGQYPVQLGGDADHLYWFA HHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHCCCCEEECCCCCHHHHHH DNVIDYIYSSHLLEDFDDTKAALKEWLRVLKVGGRLVIFCPDEQRFRVHCQKTGQPYNPH HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCCC HKHAHFSLEFVKGLLRELGQTKFIHENPDVDIYSWELVCEKIEA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCC >Mature Secondary Structure TKYIARTRQIVWKNYLRALPALKTVSRALGIENAARSAMRTILPKIQAKRTSKWAWASE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC TSKCRARLDPFCVGYGLDLGFGGDPINPRAVRVDLPQPYTAVGQYPVQLGGDADHLYWFA HHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHCCCCEEECCCCCHHHHHH DNVIDYIYSSHLLEDFDDTKAALKEWLRVLKVGGRLVIFCPDEQRFRVHCQKTGQPYNPH HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCCC HKHAHFSLEFVKGLLRELGQTKFIHENPDVDIYSWELVCEKIEA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA