Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897560

Identifier: 159897560

GI number: 159897560

Start: 1176973

End: 1177647

Strand: Reverse

Name: 159897560

Synonym: Haur_1031

Alternate gene names: NA

Gene position: 1177647-1176973 (Counterclockwise)

Preceding gene: 159897561

Following gene: 159897559

Centisome position: 18.56

GC content: 46.81

Gene sequence:

>675_bases
ATGACTAAATATATTGCTCGCACACGCCAAATTGTTTGGAAAAATTATCTGCGGGCTTTGCCAGCATTAAAAACTGTCAG
CCGTGCCTTAGGGATCGAAAATGCTGCTCGTTCGGCGATGCGCACCATTTTGCCCAAAATTCAGGCTAAACGCACCAGTA
AATGGGCTTGGGCCAGCGAAACATCCAAATGCCGCGCTCGGCTTGACCCATTTTGTGTCGGTTATGGCTTAGATTTAGGC
TTTGGTGGCGACCCAATCAACCCTCGGGCGGTGCGGGTCGATTTACCGCAACCTTATACTGCGGTTGGTCAATATCCAGT
GCAATTGGGCGGCGATGCCGATCATTTATATTGGTTTGCCGATAATGTGATCGATTATATTTATTCATCGCATTTGCTCG
AAGATTTCGACGATACCAAAGCGGCGCTAAAAGAATGGCTACGCGTATTAAAAGTTGGTGGTCGTTTGGTGATTTTCTGC
CCCGATGAACAACGCTTTCGCGTCCATTGCCAAAAAACTGGCCAGCCCTATAATCCTCATCACAAGCATGCCCATTTTTC
GCTAGAGTTTGTCAAAGGCTTGCTGCGCGAATTAGGCCAAACCAAATTTATTCATGAAAACCCCGATGTTGATATTTATT
CGTGGGAACTGGTGTGCGAGAAAATTGAGGCCTAG

Upstream 100 bases:

>100_bases
AACCAAGCCACCCAGATTGTCGATCGCGAGTTTCGCATGAGCACCATGATCGATCGGGTTGAAGCAGCGCTCTATGCTGC
CTGTAACAAGGATTCGCACC

Downstream 100 bases:

>100_bases
TTGTGGCAGACCCAAACCAAATCTCATTTTTAGCGCGAGTTCAGCGCCGCTTGCGCTACGATTGGCAAAGCAAATTTTTG
CCGCGCTGGTGGCATTTAAA

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTKYIARTRQIVWKNYLRALPALKTVSRALGIENAARSAMRTILPKIQAKRTSKWAWASETSKCRARLDPFCVGYGLDLG
FGGDPINPRAVRVDLPQPYTAVGQYPVQLGGDADHLYWFADNVIDYIYSSHLLEDFDDTKAALKEWLRVLKVGGRLVIFC
PDEQRFRVHCQKTGQPYNPHHKHAHFSLEFVKGLLRELGQTKFIHENPDVDIYSWELVCEKIEA

Sequences:

>Translated_224_residues
MTKYIARTRQIVWKNYLRALPALKTVSRALGIENAARSAMRTILPKIQAKRTSKWAWASETSKCRARLDPFCVGYGLDLG
FGGDPINPRAVRVDLPQPYTAVGQYPVQLGGDADHLYWFADNVIDYIYSSHLLEDFDDTKAALKEWLRVLKVGGRLVIFC
PDEQRFRVHCQKTGQPYNPHHKHAHFSLEFVKGLLRELGQTKFIHENPDVDIYSWELVCEKIEA
>Mature_223_residues
TKYIARTRQIVWKNYLRALPALKTVSRALGIENAARSAMRTILPKIQAKRTSKWAWASETSKCRARLDPFCVGYGLDLGF
GGDPINPRAVRVDLPQPYTAVGQYPVQLGGDADHLYWFADNVIDYIYSSHLLEDFDDTKAALKEWLRVLKVGGRLVIFCP
DEQRFRVHCQKTGQPYNPHHKHAHFSLEFVKGLLRELGQTKFIHENPDVDIYSWELVCEKIEA

Specific function: Unknown

COG id: COG4627

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25702; Mature: 25571

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYIARTRQIVWKNYLRALPALKTVSRALGIENAARSAMRTILPKIQAKRTSKWAWASE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
TSKCRARLDPFCVGYGLDLGFGGDPINPRAVRVDLPQPYTAVGQYPVQLGGDADHLYWFA
HHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHCCCCEEECCCCCHHHHHH
DNVIDYIYSSHLLEDFDDTKAALKEWLRVLKVGGRLVIFCPDEQRFRVHCQKTGQPYNPH
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCCC
HKHAHFSLEFVKGLLRELGQTKFIHENPDVDIYSWELVCEKIEA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCC
>Mature Secondary Structure 
TKYIARTRQIVWKNYLRALPALKTVSRALGIENAARSAMRTILPKIQAKRTSKWAWASE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
TSKCRARLDPFCVGYGLDLGFGGDPINPRAVRVDLPQPYTAVGQYPVQLGGDADHLYWFA
HHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHCCCCEEECCCCCHHHHHH
DNVIDYIYSSHLLEDFDDTKAALKEWLRVLKVGGRLVIFCPDEQRFRVHCQKTGQPYNPH
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCCC
HKHAHFSLEFVKGLLRELGQTKFIHENPDVDIYSWELVCEKIEA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA