| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897343
Identifier: 159897343
GI number: 159897343
Start: 922828
End: 923418
Strand: Reverse
Name: 159897343
Synonym: Haur_0814
Alternate gene names: NA
Gene position: 923418-922828 (Counterclockwise)
Preceding gene: 159897344
Following gene: 159897342
Centisome position: 14.55
GC content: 50.08
Gene sequence:
>591_bases ATGGACTATCTAGGCTTAATCGCTTTATTTGCAGGGATTTTTGGGCTGACTGGCTATGCTGGCCTGCTTTTGAGGCAGGC AATTGGGCTATATCGCCAACGCCCTGATTTGCGCCGAACGTTACGACCGGTATTGCTCAACCTGATCGAGCCATTTGTCA GCCTGCTCTACCTGATTCCTTGTATGCTCTGGTGGGATTATGGCTACCTTTTGAGTTTAGTGGGCAGCGATTTTGCGGCT GGCTCAATTGTGTTTGCCTACCACTGGCCAATGCAGCTCTTGCTGGTTTATGCCCCATTTGGCTGGATGTTTGCTCGCCA AAAAATGGTTGCACGCACGGCTTGGCTATGCTTTGCGCTTGGAGTGATACGCGTGACCATGCTCTGGCTCTGTTTCAATT ATTCTTTAGGTGGCGGCATGATTGTTTTGGCCTTGATCGTTGGAGCAGCAACATTCTGGCTGCTCGGGCGTTATCTTCAA TGGCAGGCGATACCACCACCACAGATCCCAATCATGGTTAACATTGATGAACAAGGCTTGGTGCTCATTCAGCCGATCGA GCCAAATCAAGCGCATCAAGCCGAATTGTGA
Upstream 100 bases:
>100_bases AACCAACAACTGGCGATTGGATCAGTCAATCCAGAAACAAGCCAAATTTCAACAATCATGGAATAGAATGATTGCGCTAT CTATTAAATGAGTAAACCCG
Downstream 100 bases:
>100_bases CGCAAACAAGGATAAATCAGGGGACAACATTAAGGACAAATCGGGCGTAGAATGGGTACAGCTTGACAGTAACAACGCTG TACTGATTGCTCGAAAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MDYLGLIALFAGIFGLTGYAGLLLRQAIGLYRQRPDLRRTLRPVLLNLIEPFVSLLYLIPCMLWWDYGYLLSLVGSDFAA GSIVFAYHWPMQLLLVYAPFGWMFARQKMVARTAWLCFALGVIRVTMLWLCFNYSLGGGMIVLALIVGAATFWLLGRYLQ WQAIPPPQIPIMVNIDEQGLVLIQPIEPNQAHQAEL
Sequences:
>Translated_196_residues MDYLGLIALFAGIFGLTGYAGLLLRQAIGLYRQRPDLRRTLRPVLLNLIEPFVSLLYLIPCMLWWDYGYLLSLVGSDFAA GSIVFAYHWPMQLLLVYAPFGWMFARQKMVARTAWLCFALGVIRVTMLWLCFNYSLGGGMIVLALIVGAATFWLLGRYLQ WQAIPPPQIPIMVNIDEQGLVLIQPIEPNQAHQAEL >Mature_196_residues MDYLGLIALFAGIFGLTGYAGLLLRQAIGLYRQRPDLRRTLRPVLLNLIEPFVSLLYLIPCMLWWDYGYLLSLVGSDFAA GSIVFAYHWPMQLLLVYAPFGWMFARQKMVARTAWLCFALGVIRVTMLWLCFNYSLGGGMIVLALIVGAATFWLLGRYLQ WQAIPPPQIPIMVNIDEQGLVLIQPIEPNQAHQAEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22209; Mature: 22209
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYLGLIALFAGIFGLTGYAGLLLRQAIGLYRQRPDLRRTLRPVLLNLIEPFVSLLYLIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH CMLWWDYGYLLSLVGSDFAAGSIVFAYHWPMQLLLVYAPFGWMFARQKMVARTAWLCFAL HHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVIRVTMLWLCFNYSLGGGMIVLALIVGAATFWLLGRYLQWQAIPPPQIPIMVNIDEQGL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCE VLIQPIEPNQAHQAEL EEEEECCCCCCCCCCC >Mature Secondary Structure MDYLGLIALFAGIFGLTGYAGLLLRQAIGLYRQRPDLRRTLRPVLLNLIEPFVSLLYLIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH CMLWWDYGYLLSLVGSDFAAGSIVFAYHWPMQLLLVYAPFGWMFARQKMVARTAWLCFAL HHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVIRVTMLWLCFNYSLGGGMIVLALIVGAATFWLLGRYLQWQAIPPPQIPIMVNIDEQGL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCE VLIQPIEPNQAHQAEL EEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA