| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is catE [H]
Identifier: 159897342
GI number: 159897342
Start: 921840
End: 922718
Strand: Reverse
Name: catE [H]
Synonym: Haur_0813
Alternate gene names: 159897342
Gene position: 922718-921840 (Counterclockwise)
Preceding gene: 159897343
Following gene: 159897341
Centisome position: 14.54
GC content: 51.65
Gene sequence:
>879_bases ATGGCTACATTTCGCACGATTACGCCACAATCCATCGATGCCGCTACAACGCTCGGCGTAACTACCCTGCGTGTCGCCGA TGCTGGCCGCTCATTAGTGTTTTATCGCGATTTACTTGGTTTTCAGGTTTTAGAACAAACTGAATCAACAATTTTGTTGG GTTCGCCCAATCAGGTTGTGCTACGTTTGGATGTTGAAGCTGGCTTAAAGCGCCACCCGAGCCATACCACTGGCTTGTAT CACGCCGCAATTCTCTTGCCAACCCGCCTCGATTTGGCCTATGTGTTGCAGCGTTTGTTAGCGGTGCGCTATCGCTTTGG CGCTTCGGATCATGCGGTCAGCGAAGCTTTGTATCTCGATGATCCCGATGGCAATGGCTTAGAAATTTACCGTGATCGAC CGCGCAACGAATGGCGCTGGGGAGCGAATGGCGAAGTGCACATGGTCACCGAATCGCTTGATCTGTATGGAGTTTTGGCC GAAATAACCCCGACTGCACCCGCTTGGGCAGGCATTCCTGCTGGCACGAAGATTGGCCATATGCATTTACAAGTAGGTAA TTTGCGCCAAGCCGAAGAATTTTATCACGGGGTGTTGGGGTTTGATATTGTGGCCCATTATCCCGGGGCACTATTTGTCA GCGCAGGTGGCTATCATCACCATCTCGGCTTGAATGTGTGGCAAAGCCAAAACGGCCCACAGCAACCCAACGATGCCGCA GGTTTAGGCTATTTTGAAATTATTATGCCCAACCAAGCGGCGCTTGAAATCGTGCGTCAGCGCTTGCAAGTGGCTGAAGT CGCGGTTCAAGAGCAAGTCGATGGGCTGGTTGTGCACGATCCATGGCAAACTGAATTGCGCTTTATCGTTGCCGCCTAA
Upstream 100 bases:
>100_bases GGATAAATCAGGGGACAACATTAAGGACAAATCGGGCGTAGAATGGGTACAGCTTGACAGTAACAACGCTGTACTGATTG CTCGAAAGGACTTTATTTTT
Downstream 100 bases:
>100_bases AATAATCATCCCTACGAACGAGCAAATGTTAAACTGGGCTATGCTATGCTATAGCCCAATTTTGTTTTAAGCGATAGGAG AGCAGATTCGTGCAGTACGT
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Catechol-induced ring cleavage extradiol dioxygenase [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MATFRTITPQSIDAATTLGVTTLRVADAGRSLVFYRDLLGFQVLEQTESTILLGSPNQVVLRLDVEAGLKRHPSHTTGLY HAAILLPTRLDLAYVLQRLLAVRYRFGASDHAVSEALYLDDPDGNGLEIYRDRPRNEWRWGANGEVHMVTESLDLYGVLA EITPTAPAWAGIPAGTKIGHMHLQVGNLRQAEEFYHGVLGFDIVAHYPGALFVSAGGYHHHLGLNVWQSQNGPQQPNDAA GLGYFEIIMPNQAALEIVRQRLQVAEVAVQEQVDGLVVHDPWQTELRFIVAA
Sequences:
>Translated_292_residues MATFRTITPQSIDAATTLGVTTLRVADAGRSLVFYRDLLGFQVLEQTESTILLGSPNQVVLRLDVEAGLKRHPSHTTGLY HAAILLPTRLDLAYVLQRLLAVRYRFGASDHAVSEALYLDDPDGNGLEIYRDRPRNEWRWGANGEVHMVTESLDLYGVLA EITPTAPAWAGIPAGTKIGHMHLQVGNLRQAEEFYHGVLGFDIVAHYPGALFVSAGGYHHHLGLNVWQSQNGPQQPNDAA GLGYFEIIMPNQAALEIVRQRLQVAEVAVQEQVDGLVVHDPWQTELRFIVAA >Mature_291_residues ATFRTITPQSIDAATTLGVTTLRVADAGRSLVFYRDLLGFQVLEQTESTILLGSPNQVVLRLDVEAGLKRHPSHTTGLYH AAILLPTRLDLAYVLQRLLAVRYRFGASDHAVSEALYLDDPDGNGLEIYRDRPRNEWRWGANGEVHMVTESLDLYGVLAE ITPTAPAWAGIPAGTKIGHMHLQVGNLRQAEEFYHGVLGFDIVAHYPGALFVSAGGYHHHLGLNVWQSQNGPQQPNDAAG LGYFEIIMPNQAALEIVRQRLQVAEVAVQEQVDGLVVHDPWQTELRFIVAA
Specific function: Involved in the meta cleavage of catechol to 2- hydroxymuconic semialdehyde. Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]
COG id: COG2514
COG function: function code R; Predicted ring-cleavage extradiol dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 - InterPro: IPR000486 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.2 [H]
Molecular weight: Translated: 32200; Mature: 32069
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFRTITPQSIDAATTLGVTTLRVADAGRSLVFYRDLLGFQVLEQTESTILLGSPNQVV CCCEECCCCCCCCHHHHCCEEEEEEECCCCEEEEHHHHHHHHHHHCCCCEEEEECCCEEE LRLDVEAGLKRHPSHTTGLYHAAILLPTRLDLAYVLQRLLAVRYRFGASDHAVSEALYLD EEEEHHHCCCCCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHEEEEEE DPDGNGLEIYRDRPRNEWRWGANGEVHMVTESLDLYGVLAEITPTAPAWAGIPAGTKIGH CCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEE MHLQVGNLRQAEEFYHGVLGFDIVAHYPGALFVSAGGYHHHLGLNVWQSQNGPQQPNDAA EEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCEEEECCCCCCCCCCCC GLGYFEIIMPNQAALEIVRQRLQVAEVAVQEQVDGLVVHDPWQTELRFIVAA CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEC >Mature Secondary Structure ATFRTITPQSIDAATTLGVTTLRVADAGRSLVFYRDLLGFQVLEQTESTILLGSPNQVV CCEECCCCCCCCHHHHCCEEEEEEECCCCEEEEHHHHHHHHHHHCCCCEEEEECCCEEE LRLDVEAGLKRHPSHTTGLYHAAILLPTRLDLAYVLQRLLAVRYRFGASDHAVSEALYLD EEEEHHHCCCCCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHEEEEEE DPDGNGLEIYRDRPRNEWRWGANGEVHMVTESLDLYGVLAEITPTAPAWAGIPAGTKIGH CCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEE MHLQVGNLRQAEEFYHGVLGFDIVAHYPGALFVSAGGYHHHLGLNVWQSQNGPQQPNDAA EEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCEEEECCCCCCCCCCCC GLGYFEIIMPNQAALEIVRQRLQVAEVAVQEQVDGLVVHDPWQTELRFIVAA CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704981; 9384377 [H]