| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897344
Identifier: 159897344
GI number: 159897344
Start: 923453
End: 924130
Strand: Reverse
Name: 159897344
Synonym: Haur_0815
Alternate gene names: NA
Gene position: 924130-923453 (Counterclockwise)
Preceding gene: 159897345
Following gene: 159897343
Centisome position: 14.56
GC content: 39.97
Gene sequence:
>678_bases ATGCATTTACTATCGGTAAGTGTTGGCGGATGGGGCATATACATATCATTAATTACGTTTGGCATAGTTGGCATTTTAAT CGTCGTGATGAATCTATGGCTGCTGGTCTTGCTTGGTCGTATTCAAAAGATGCCTAGCAGTCACGCAAAGGGTTCTTGGT GGTTAATCAACATCAATTTGCTTGAACCAATCACAACAAGTTGTTGGTTAGTTAGTCTCACTTTGATTACAGGTGATGAT TTTTATCGATCCCTTTGGACTATCTCAGAAACCTTGTGGCAATGGGGATTTTTAACTGGATCGCTAGGTCAAAGTAATAT TGAGATGTTACTGTTTTGCTTAAGCTTCTATTGGCCAATGCTGCTTTCTTTAGTGATTGTGCCAATGTTTGGTTTGCTGG GCCGTCATATAACCCGCCAAACTGCCCGATTAAGCTTAAAATATGGATTATTACGCATCTATGGTGTCTATATTGCACTC ATTGCGGTACAAGAGGCTACCTATTTCCCACTTTTATTTGGAGTATTTGGGCTAAGCATGTATGTTTATCGCAAAATGTA TGACCATGCAAAAACCATTTTGCAACACCCAAGCCAAGCAGTAACCATTCACAACCAACAACTGGCGATTGGATCAGTCA ATCCAGAAACAAGCCAAATTTCAACAATCATGGAATAG
Upstream 100 bases:
>100_bases TCCATTTGAAGAACAATTTCCGCAATCAAGCGCCACTTTTTCGCCATTTAGCCATGTCACCATGTTATTAGCGTTTTTTA ATCGTTAAGGAGACAAGGTT
Downstream 100 bases:
>100_bases AATGATTGCGCTATCTATTAAATGAGTAAACCCGATGGACTATCTAGGCTTAATCGCTTTATTTGCAGGGATTTTTGGGC TGACTGGCTATGCTGGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MHLLSVSVGGWGIYISLITFGIVGILIVVMNLWLLVLLGRIQKMPSSHAKGSWWLININLLEPITTSCWLVSLTLITGDD FYRSLWTISETLWQWGFLTGSLGQSNIEMLLFCLSFYWPMLLSLVIVPMFGLLGRHITRQTARLSLKYGLLRIYGVYIAL IAVQEATYFPLLFGVFGLSMYVYRKMYDHAKTILQHPSQAVTIHNQQLAIGSVNPETSQISTIME
Sequences:
>Translated_225_residues MHLLSVSVGGWGIYISLITFGIVGILIVVMNLWLLVLLGRIQKMPSSHAKGSWWLININLLEPITTSCWLVSLTLITGDD FYRSLWTISETLWQWGFLTGSLGQSNIEMLLFCLSFYWPMLLSLVIVPMFGLLGRHITRQTARLSLKYGLLRIYGVYIAL IAVQEATYFPLLFGVFGLSMYVYRKMYDHAKTILQHPSQAVTIHNQQLAIGSVNPETSQISTIME >Mature_225_residues MHLLSVSVGGWGIYISLITFGIVGILIVVMNLWLLVLLGRIQKMPSSHAKGSWWLININLLEPITTSCWLVSLTLITGDD FYRSLWTISETLWQWGFLTGSLGQSNIEMLLFCLSFYWPMLLSLVIVPMFGLLGRHITRQTARLSLKYGLLRIYGVYIAL IAVQEATYFPLLFGVFGLSMYVYRKMYDHAKTILQHPSQAVTIHNQQLAIGSVNPETSQISTIME
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25491; Mature: 25491
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLLSVSVGGWGIYISLITFGIVGILIVVMNLWLLVLLGRIQKMPSSHAKGSWWLININL CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE LEPITTSCWLVSLTLITGDDFYRSLWTISETLWQWGFLTGSLGQSNIEMLLFCLSFYWPM CCCHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LLSLVIVPMFGLLGRHITRQTARLSLKYGLLRIYGVYIALIAVQEATYFPLLFGVFGLSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVYRKMYDHAKTILQHPSQAVTIHNQQLAIGSVNPETSQISTIME HHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCHHHHHHHCC >Mature Secondary Structure MHLLSVSVGGWGIYISLITFGIVGILIVVMNLWLLVLLGRIQKMPSSHAKGSWWLININL CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE LEPITTSCWLVSLTLITGDDFYRSLWTISETLWQWGFLTGSLGQSNIEMLLFCLSFYWPM CCCHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LLSLVIVPMFGLLGRHITRQTARLSLKYGLLRIYGVYIALIAVQEATYFPLLFGVFGLSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVYRKMYDHAKTILQHPSQAVTIHNQQLAIGSVNPETSQISTIME HHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA