Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423180
Identifier: 158423180
GI number: 158423180
Start: 1770300
End: 1772174
Strand: Reverse
Name: 158423180
Synonym: AZC_1556
Alternate gene names: NA
Gene position: 1772174-1770300 (Counterclockwise)
Preceding gene: 158423181
Following gene: 158423178
Centisome position: 33.0
GC content: 70.19
Gene sequence:
>1875_bases GTGGGTCTCGGGATCGGACGAGACGAAGATGGCGGACCGCGCCCCGCGCTCGAGCCCAAGGCGCAGAAGCGCGCGGGCAG CCCGCGCCCGCGCTTCGGGCGCGCCGAGCAGCAGGCTGATGCGCAGCAGCGGCCGGCCGGCGGGATCGTTATCGTCCAGC GCCATGTCGAAGACGGCGAGCGCTTCCGGGGCCGTCTGTGGGCCAAGCACAAGCCGCTCATGGGACGCGCCCGGCTCGGC ACCGTAACGCCAGGCGAGCCATTCCGGCGTGTGGTGCACGCGGCAGCGGGCGGCGCCGCCGACGGGAGGCGGCGGCACAA AGTGCGTTCCCCGCCCCACACGGTCGAGATGGGCCGGAGCGGCCGCACGGGAGAGGCGCACCTGCGCGGCAATGACCGCA TCGGCGAGCGGCGCCAGCAGCCCCGGCACGGCAAGCGGCGCCGCCAGCGGGCGGGCGAGCCGCGTCATCGTGTCGAGATG CCGCCAGCCGAGCTTCGACATGAACATGGGATACGAATTCTCGTTCGGCACGCCATAGACGAGGGCGTAGCCGCGCCGCG TCGCCTCCGCATAGCAATGGCGGGCGAGTGTCACGGACATGTTCTGCCGCCGGAACTCCGGATGGGTCATGGTGTCCACG GACTGGGCGCCCATCACGGGAGCGCCGTCCAGCAGGAGCGGGGTCGGGATGACCGCATAAAGGCCGACGCAGCGCTCCTC GATCATGGCCACCGACGCCAGCGGGCCATAGGGCCCATCGAACAGCTTCCAGCGCAGTTCGTCCTCGGCGATCGGCCGGC CCCAGACGGTTTGGTAGAGCGCAAGGATGCCGGGAATGTGCCGGTGTTCGGCGAGGACCGGCTGCCACGCGGGCGCGGAC GGCTGGGGAGTGGCGGGCTGAGGTGTGGGGCTCTCGGGGGCCGGCATGGGTCAGTGCTTTCCGAACCAGCGCGGGAACGG CCAGTAAAAGGCACGGCCGCCCAGCACCGCCTGATAATGCCGGCCGTCCACCACCTCGAAGCGGCCGGTGGCGTCATAGG CATGAACACCATTCATGCGGAAATCGAACGCATTGACCTCGGCCACCGTGCGCTGGCGATAGCCGCCCGCATCCAGCCGC TCGACCTCATACAACCCGAGACCCGCGCCATAACCGCCCGCGCAATTCTGCGCCAGCCGCCGCAGCTTCCCGTCCTGCCA CCACATGCGACCGCCGGGCCGGGCCCGGCGTACGTCGGAGAGGACCGGATTGTCGCCCACGCGCGTCCATGGCCCGCACA GCGCCGTGGCCCGGAAGACATGGAGCTCGTCCCAGCCGGAGCCGCCATAATCCAGCACGGCCGCGAACATCAGCCAGCCG TCCGGCTCGCGCACCACGCAGGGATCAACGATGTCGATGTCCGTCAGCGGCAGGCAGTGCAGTTCCCAGCGGGTGGGGAA ATCCACCGCGCGATAGACCTCCACCCGCCGGCGGGCGAGCGTCTCAGGGATCATGTAGATCTCGCCCTCGGCGGCGAACA CCAAGGGATTGGAGAGGTGATAGCTGGTGGCGAGCGCCGGCCGCGCCGGGCCGATCTCGCCGGCCGCCGAAACCTCGGAC ACGGAGATGATGGCCTTGCCCTCCGCCCACTCCCAATCCTCGTAGAAGAGGAAGGTGCGACCGTCCCTTTCGAACAGGAA CGGATCGGCATAGAAGCGGCCGGGCGGCGCCTCGATGAAGCGGAAGCCCTGCGCCCAGGCGCGGCTGCCCCAGGGCGGGT CCTTGTCCGTGCGGCGGCGGAGGCCAATGCGCCACTGGTCCCGCACCAGCACGTAGGGCACGAGGCAGCGGCGGAAGAAG TGGCGCAGACGGAAGCGGGTGAACTCAGCTGCTGA
Upstream 100 bases:
>100_bases CGCCTGCCCGGTCCGGCAGACGCTCCATCGGACGCGCCAGCGCGCCGAACGCCAGCGGCATCCCCTCGCGCGGCCGAAAG CCCAGCGGGCGGAGTAGCGC
Downstream 100 bases:
>100_bases AACCGGCCCCGGTAGCGGCGGCAGGGTCTGGTCAATGGTGGCGCGCGCCTCGGCGCAGAAGGCTTCGCCGCCGATGCGGG CAAGCCGATCCAGCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 624; Mature: 623
Protein sequence:
>624_residues MGLGIGRDEDGGPRPALEPKAQKRAGSPRPRFGRAEQQADAQQRPAGGIVIVQRHVEDGERFRGRLWAKHKPLMGRARLG TVTPGEPFRRVVHAAAGGAADGRRRHKVRSPPHTVEMGRSGRTGEAHLRGNDRIGERRQQPRHGKRRRQRAGEPRHRVEM PPAELRHEHGIRILVRHAIDEGVAAPRRLRIAMAGECHGHVLPPELRMGHGVHGLGAHHGSAVQQERGRDDRIKADAALL DHGHRRQRAIGPIEQLPAQFVLGDRPAPDGLVERKDAGNVPVFGEDRLPRGRGRLGSGGLRCGALGGRHGSVLSEPARER PVKGTAAQHRLIMPAVHHLEAAGGVIGMNTIHAEIERIDLGHRALAIAARIQPLDLIQPETRAITARAILRQPPQLPVLP PHATAGPGPAYVGEDRIVAHARPWPAQRRGPEDMELVPAGAAIIQHGREHQPAVRLAHHAGINDVDVRQRQAVQFPAGGE IHRAIDLHPPAGERLRDHVDLALGGEHQGIGEVIAGGERRPRRADLAGRRNLGHGDDGLALRPLPILVEEEGATVPFEQE RIGIEAAGRRLDEAEALRPGAAAPGRVLVRAAAEANAPLVPHQHVGHEAAAEEVAQTEAGELSC
Sequences:
>Translated_624_residues MGLGIGRDEDGGPRPALEPKAQKRAGSPRPRFGRAEQQADAQQRPAGGIVIVQRHVEDGERFRGRLWAKHKPLMGRARLG TVTPGEPFRRVVHAAAGGAADGRRRHKVRSPPHTVEMGRSGRTGEAHLRGNDRIGERRQQPRHGKRRRQRAGEPRHRVEM PPAELRHEHGIRILVRHAIDEGVAAPRRLRIAMAGECHGHVLPPELRMGHGVHGLGAHHGSAVQQERGRDDRIKADAALL DHGHRRQRAIGPIEQLPAQFVLGDRPAPDGLVERKDAGNVPVFGEDRLPRGRGRLGSGGLRCGALGGRHGSVLSEPARER PVKGTAAQHRLIMPAVHHLEAAGGVIGMNTIHAEIERIDLGHRALAIAARIQPLDLIQPETRAITARAILRQPPQLPVLP PHATAGPGPAYVGEDRIVAHARPWPAQRRGPEDMELVPAGAAIIQHGREHQPAVRLAHHAGINDVDVRQRQAVQFPAGGE IHRAIDLHPPAGERLRDHVDLALGGEHQGIGEVIAGGERRPRRADLAGRRNLGHGDDGLALRPLPILVEEEGATVPFEQE RIGIEAAGRRLDEAEALRPGAAAPGRVLVRAAAEANAPLVPHQHVGHEAAAEEVAQTEAGELSC >Mature_623_residues GLGIGRDEDGGPRPALEPKAQKRAGSPRPRFGRAEQQADAQQRPAGGIVIVQRHVEDGERFRGRLWAKHKPLMGRARLGT VTPGEPFRRVVHAAAGGAADGRRRHKVRSPPHTVEMGRSGRTGEAHLRGNDRIGERRQQPRHGKRRRQRAGEPRHRVEMP PAELRHEHGIRILVRHAIDEGVAAPRRLRIAMAGECHGHVLPPELRMGHGVHGLGAHHGSAVQQERGRDDRIKADAALLD HGHRRQRAIGPIEQLPAQFVLGDRPAPDGLVERKDAGNVPVFGEDRLPRGRGRLGSGGLRCGALGGRHGSVLSEPARERP VKGTAAQHRLIMPAVHHLEAAGGVIGMNTIHAEIERIDLGHRALAIAARIQPLDLIQPETRAITARAILRQPPQLPVLPP HATAGPGPAYVGEDRIVAHARPWPAQRRGPEDMELVPAGAAIIQHGREHQPAVRLAHHAGINDVDVRQRQAVQFPAGGEI HRAIDLHPPAGERLRDHVDLALGGEHQGIGEVIAGGERRPRRADLAGRRNLGHGDDGLALRPLPILVEEEGATVPFEQER IGIEAAGRRLDEAEALRPGAAAPGRVLVRAAAEANAPLVPHQHVGHEAAAEEVAQTEAGELSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67400; Mature: 67268
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLGIGRDEDGGPRPALEPKAQKRAGSPRPRFGRAEQQADAQQRPAGGIVIVQRHVEDGE CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCH RFRGRLWAKHKPLMGRARLGTVTPGEPFRRVVHAAAGGAADGRRRHKVRSPPHTVEMGRS HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHCCCC GRTGEAHLRGNDRIGERRQQPRHGKRRRQRAGEPRHRVEMPPAELRHEHGIRILVRHAID CCCCCEEECCCCCHHHHHCCCHHHHHHHHHCCCCHHCCCCCHHHHHHHCCCEEEEHHHHH EGVAAPRRLRIAMAGECHGHVLPPELRMGHGVHGLGAHHGSAVQQERGRDDRIKADAALL HCCCCCCEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHH DHGHRRQRAIGPIEQLPAQFVLGDRPAPDGLVERKDAGNVPVFGEDRLPRGRGRLGSGGL HCCHHHHHHCCCHHHCCHHEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCE RCGALGGRHGSVLSEPARERPVKGTAAQHRLIMPAVHHLEAAGGVIGMNTIHAEIERIDL EECCCCCCCCCHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCC GHRALAIAARIQPLDLIQPETRAITARAILRQPPQLPVLPPHATAGPGPAYVGEDRIVAH CHHHEEHHHHCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE ARPWPAQRRGPEDMELVPAGAAIIQHGREHQPAVRLAHHAGINDVDVRQRQAVQFPAGGE CCCCCHHCCCCCCCEEECCCHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCC IHRAIDLHPPAGERLRDHVDLALGGEHQGIGEVIAGGERRPRRADLAGRRNLGHGDDGLA EEEEEECCCCCCHHHHHHHCEEECCCCCCHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCE LRPLPILVEEEGATVPFEQERIGIEAAGRRLDEAEALRPGAAAPGRVLVRAAAEANAPLV ECCCEEEEECCCCCCCCHHHHCCHHHHHCCCCHHHHCCCCCCCCCCEEEEEHHCCCCCCC PHQHVGHEAAAEEVAQTEAGELSC CCHHCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GLGIGRDEDGGPRPALEPKAQKRAGSPRPRFGRAEQQADAQQRPAGGIVIVQRHVEDGE CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCH RFRGRLWAKHKPLMGRARLGTVTPGEPFRRVVHAAAGGAADGRRRHKVRSPPHTVEMGRS HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHCCCC GRTGEAHLRGNDRIGERRQQPRHGKRRRQRAGEPRHRVEMPPAELRHEHGIRILVRHAID CCCCCEEECCCCCHHHHHCCCHHHHHHHHHCCCCHHCCCCCHHHHHHHCCCEEEEHHHHH EGVAAPRRLRIAMAGECHGHVLPPELRMGHGVHGLGAHHGSAVQQERGRDDRIKADAALL HCCCCCCEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHH DHGHRRQRAIGPIEQLPAQFVLGDRPAPDGLVERKDAGNVPVFGEDRLPRGRGRLGSGGL HCCHHHHHHCCCHHHCCHHEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCE RCGALGGRHGSVLSEPARERPVKGTAAQHRLIMPAVHHLEAAGGVIGMNTIHAEIERIDL EECCCCCCCCCHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCC GHRALAIAARIQPLDLIQPETRAITARAILRQPPQLPVLPPHATAGPGPAYVGEDRIVAH CHHHEEHHHHCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE ARPWPAQRRGPEDMELVPAGAAIIQHGREHQPAVRLAHHAGINDVDVRQRQAVQFPAGGE CCCCCHHCCCCCCCEEECCCHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCC IHRAIDLHPPAGERLRDHVDLALGGEHQGIGEVIAGGERRPRRADLAGRRNLGHGDDGLA EEEEEECCCCCCHHHHHHHCEEECCCCCCHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCE LRPLPILVEEEGATVPFEQERIGIEAAGRRLDEAEALRPGAAAPGRVLVRAAAEANAPLV ECCCEEEEECCCCCCCCHHHHCCHHHHHCCCCHHHHCCCCCCCCCCEEEEEHHCCCCCCC PHQHVGHEAAAEEVAQTEAGELSC CCHHCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA