Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is gnl [H]
Identifier: 158423181
GI number: 158423181
Start: 1772347
End: 1773489
Strand: Reverse
Name: gnl [H]
Synonym: AZC_1557
Alternate gene names: 158423181
Gene position: 1773489-1772347 (Counterclockwise)
Preceding gene: 158423182
Following gene: 158423180
Centisome position: 33.03
GC content: 64.3
Gene sequence:
>1143_bases GTGCCGGCCATATGTGCCAGCAAGGGAAACGCCATGCCTCATCCCGATCTTTCACCGGTAGACCGCCCGTCTCAAGCGTC CATGGACCGTCGCCATCTCCTGCGTACCGCAGGTGGGCTTGCCGCGACGGTCGCGCTCGGCGGAAGCGCGCTCGGCCGCG ACTTCGGACCCAATGCCCCGCCCCAGCGCTATCCAGATCCGGACATCGTCATCATCGACGAGAAGCGCTTCAAGGCGAAG GTCGGAAACACCGCCATCCAGAGGGTGTTCACCGGCTGTCTCTGGGCGGAGGGGCCGGCCTGGAATGCACAGGGCCGCTA TCTCGTCTGGAGCGACATTCCGAACAACCGGCAACTGCGCTACCTCGACGATGTGAACCGGGTCTCGGACCGCTTTCGCC AGCCCTCCAACGAAAGCAACGGCAATACCTTCGACACGGAAGGCCGGCAGATCACCTGCGAGCGCACGCGGGTGGTGCGC TACGAGCATGACGGCACCGCCACCGTCCTGGCGGAGCGGGCGAATGACAAGCAACTCAACGGACCGAACGACGCCGTGGT CCATCCCGTGGACAAGTCCATCTGGTTCACGGACCCCGGCTATGGCGCCAACAGCCTTTATGAGGGACAGCGGGCGAACA CCGGCTCCGTCCAGCCGTTTCAGAAGGAAGCCGTCTATCGCATCGACGCGCAGACGGGGCAGGTGACGAAGGTGGCGGAC GAACCGCTGAAGCCCAACGGCCTCGCCTTCAGCGCCGACTACAAGAAGCTCTATGTCTGCGACACCGGCATCACCCACTA TCCCAACGCCAAGAACATCATCTGGCAGTATGACCTCGATGGCGGAAAGCTGAGCAATCCCGGCACCTTCGCGGACACCA CCATGGACGGAAAGTCTGGCTTCGCCGACGGCCTGCGGGTGGATGTGGACGGCAATGTGTGGGCCGGTGTCGGGTGGGTC GGCGAGGGGTATGACGGGGTGCATGTCTTCGCCCCCGACGGCGCACGCATCGGCCTGATCCGCCTGCCTGAAATCTGCGC CAACGTCTGCTTCGGCGGCGCCAAGCGCAACCGCCTCTTCATGGCGGCGAGCCAGTCGCTCTATGCGGTCTATGTGGAAA CCCGCGGCGCGCATTTCTGCTGA
Upstream 100 bases:
>100_bases ACGACACGTTCAACATCGCGACATCTTGATGCCATAGACGAGCCACAGCTTTTCCCTGACCCCGCAGAGGGTTGCGCGCC GCTGTCCGTCATGGGGCGGC
Downstream 100 bases:
>100_bases GCACCGGGCGCGCATCCTTCGTGGCTGCGCGCCTCATCCCTCAGTCCCGGTCGCCGCCCTCGAACGCCATCTCGCCTGCC CGGTCCGGCAGACGCTCCAT
Product: gluconolactonase
Products: NA
Alternate protein names: D-glucono-delta-lactone lactonohydrolase [H]
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MPAICASKGNAMPHPDLSPVDRPSQASMDRRHLLRTAGGLAATVALGGSALGRDFGPNAPPQRYPDPDIVIIDEKRFKAK VGNTAIQRVFTGCLWAEGPAWNAQGRYLVWSDIPNNRQLRYLDDVNRVSDRFRQPSNESNGNTFDTEGRQITCERTRVVR YEHDGTATVLAERANDKQLNGPNDAVVHPVDKSIWFTDPGYGANSLYEGQRANTGSVQPFQKEAVYRIDAQTGQVTKVAD EPLKPNGLAFSADYKKLYVCDTGITHYPNAKNIIWQYDLDGGKLSNPGTFADTTMDGKSGFADGLRVDVDGNVWAGVGWV GEGYDGVHVFAPDGARIGLIRLPEICANVCFGGAKRNRLFMAASQSLYAVYVETRGAHFC
Sequences:
>Translated_380_residues MPAICASKGNAMPHPDLSPVDRPSQASMDRRHLLRTAGGLAATVALGGSALGRDFGPNAPPQRYPDPDIVIIDEKRFKAK VGNTAIQRVFTGCLWAEGPAWNAQGRYLVWSDIPNNRQLRYLDDVNRVSDRFRQPSNESNGNTFDTEGRQITCERTRVVR YEHDGTATVLAERANDKQLNGPNDAVVHPVDKSIWFTDPGYGANSLYEGQRANTGSVQPFQKEAVYRIDAQTGQVTKVAD EPLKPNGLAFSADYKKLYVCDTGITHYPNAKNIIWQYDLDGGKLSNPGTFADTTMDGKSGFADGLRVDVDGNVWAGVGWV GEGYDGVHVFAPDGARIGLIRLPEICANVCFGGAKRNRLFMAASQSLYAVYVETRGAHFC >Mature_379_residues PAICASKGNAMPHPDLSPVDRPSQASMDRRHLLRTAGGLAATVALGGSALGRDFGPNAPPQRYPDPDIVIIDEKRFKAKV GNTAIQRVFTGCLWAEGPAWNAQGRYLVWSDIPNNRQLRYLDDVNRVSDRFRQPSNESNGNTFDTEGRQITCERTRVVRY EHDGTATVLAERANDKQLNGPNDAVVHPVDKSIWFTDPGYGANSLYEGQRANTGSVQPFQKEAVYRIDAQTGQVTKVADE PLKPNGLAFSADYKKLYVCDTGITHYPNAKNIIWQYDLDGGKLSNPGTFADTTMDGKSGFADGLRVDVDGNVWAGVGWVG EGYDGVHVFAPDGARIGLIRLPEICANVCFGGAKRNRLFMAASQSLYAVYVETRGAHFC
Specific function: Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 - InterPro: IPR006311 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: =3.1.1.17 [H]
Molecular weight: Translated: 41545; Mature: 41414
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAICASKGNAMPHPDLSPVDRPSQASMDRRHLLRTAGGLAATVALGGSALGRDFGPNAP CCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHCCCCCCCCC PQRYPDPDIVIIDEKRFKAKVGNTAIQRVFTGCLWAEGPAWNAQGRYLVWSDIPNNRQLR CCCCCCCCEEEECCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEE YLDDVNRVSDRFRQPSNESNGNTFDTEGRQITCERTRVVRYEHDGTATVLAERANDKQLN EHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCC GPNDAVVHPVDKSIWFTDPGYGANSLYEGQRANTGSVQPFQKEAVYRIDAQTGQVTKVAD CCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECC EPLKPNGLAFSADYKKLYVCDTGITHYPNAKNIIWQYDLDGGKLSNPGTFADTTMDGKSG CCCCCCCEEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC FADGLRVDVDGNVWAGVGWVGEGYDGVHVFAPDGARIGLIRLPEICANVCFGGAKRNRLF CCCCEEEEECCCEEEEECCCCCCCCCEEEECCCCCEEEEEECHHHHHHHHCCCCCCCEEE MAASQSLYAVYVETRGAHFC EEECCCEEEEEEECCCCCCC >Mature Secondary Structure PAICASKGNAMPHPDLSPVDRPSQASMDRRHLLRTAGGLAATVALGGSALGRDFGPNAP CCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHCCCCCCCCC PQRYPDPDIVIIDEKRFKAKVGNTAIQRVFTGCLWAEGPAWNAQGRYLVWSDIPNNRQLR CCCCCCCCEEEECCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEE YLDDVNRVSDRFRQPSNESNGNTFDTEGRQITCERTRVVRYEHDGTATVLAERANDKQLN EHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCC GPNDAVVHPVDKSIWFTDPGYGANSLYEGQRANTGSVQPFQKEAVYRIDAQTGQVTKVAD CCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECC EPLKPNGLAFSADYKKLYVCDTGITHYPNAKNIIWQYDLDGGKLSNPGTFADTTMDGKSG CCCCCCCEEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC FADGLRVDVDGNVWAGVGWVGEGYDGVHVFAPDGARIGLIRLPEICANVCFGGAKRNRLF CCCCEEEEECCCEEEEECCCCCCCCCEEEECCCCCEEEEEECHHHHHHHHCCCCCCCEEE MAASQSLYAVYVETRGAHFC EEECCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1482681 [H]