| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is thrB
Identifier: 158423091
GI number: 158423091
Start: 1665920
End: 1666885
Strand: Reverse
Name: thrB
Synonym: AZC_1467
Alternate gene names: 158423091
Gene position: 1666885-1665920 (Counterclockwise)
Preceding gene: 158423092
Following gene: 158423090
Centisome position: 31.04
GC content: 66.56
Gene sequence:
>966_bases GTGGCGGTCTATACGGACGTTTCGGCGGCGAGCCTTTCGGATTATCTCGCCGCTTACGATATCGGCACACTGGTTTCGTA TCACGGCATCGCGGAGGGCGTGGAGAATTCCAACTTCCTCGTCCAGACCACGACCGCGAGCTTCATCCTCACGCTCTATG AGAAGCGCGTCGATCCGGCCGACCTGCCCTTCTTCATCGGCCTGATGCAGCATCTGGCGGCGAACGGCATTTCGTGCCCG CAGCCGGTGGCCATGCGCGACGGCACCATGCTCGGCACCCTTGCCGGCCGCCCCTGCGCCATCGTGACCTTCCTTCCCGG CGTGTCCGTGCGCAAGCCCACCGCCGCCAACTGCGGACAGCTCGGACGCGCGCTGGCGCAACTGCATCTTGCGGGTGCGG GCTTCGAGATCACTCGCCGCAATGCCCTTTCCGTGTCCGGCTGGCGGCCTTTGTTCGAGGCGGCAGGCCCGCGCACCGAT ACGGTCCATCCCGGCCTTGCGGCGATCATCACCGAGGAACTGGCCGCGCACGAGGCCCACTGGCCCGCCGCGCTTCCGGC CGGTGTGATCCATGCGGATCTCTTCCCGGACAACGCCTTCTTCCTCGATGACACCCTCTCCGGCATCATCGACTTCTACT TCGCCTGCAACGATCTCTTTGCTTATGACGTGGCCGTGTGCCTGAACGCCTGGTGCTTCGAGGCGGACGGCGCCTTCAAC GCCACCAAGGGTCGGGCGCTGCTCGCCGGCTACCAGGCGGTGCGCCCGATGGAAGCGGCTGAGGTGGAGGCCCTGCCCCA GCTCGCCCGCGGCGCCGCCCTGCGCTTCCTGCTCACGCGGCTGGTGGACTGGCTGAACGTGCCGGAAGGCGCCCTCGTGC GCCCCAAAGACCCCTTGGAATATCTGAGGAAGCTACGCTTCCACCGGGCCGTAGCCAGCGCCCGCGACTATGGACTTGCC GCATGA
Upstream 100 bases:
>100_bases CGAGCGTTACGACGTGGATGTGGAAACGGTGACGGCCGCGCAGGAGGATGTGTTCTTTCCGCTTCCCCGCGCGCTGCGCG AAGATGCGGCGGAGTAGAGC
Downstream 100 bases:
>100_bases GCCGGGTGGAGATCTGGACCGACGGCGCCTGCTCGGGCAATCCCGGCCCCGGCGGCTGGGGCGCCATCCTGCGCTCCGGT CCGCACGAGAAGGAACTGAA
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MAVYTDVSAASLSDYLAAYDIGTLVSYHGIAEGVENSNFLVQTTTASFILTLYEKRVDPADLPFFIGLMQHLAANGISCP QPVAMRDGTMLGTLAGRPCAIVTFLPGVSVRKPTAANCGQLGRALAQLHLAGAGFEITRRNALSVSGWRPLFEAAGPRTD TVHPGLAAIITEELAAHEAHWPAALPAGVIHADLFPDNAFFLDDTLSGIIDFYFACNDLFAYDVAVCLNAWCFEADGAFN ATKGRALLAGYQAVRPMEAAEVEALPQLARGAALRFLLTRLVDWLNVPEGALVRPKDPLEYLRKLRFHRAVASARDYGLA A
Sequences:
>Translated_321_residues MAVYTDVSAASLSDYLAAYDIGTLVSYHGIAEGVENSNFLVQTTTASFILTLYEKRVDPADLPFFIGLMQHLAANGISCP QPVAMRDGTMLGTLAGRPCAIVTFLPGVSVRKPTAANCGQLGRALAQLHLAGAGFEITRRNALSVSGWRPLFEAAGPRTD TVHPGLAAIITEELAAHEAHWPAALPAGVIHADLFPDNAFFLDDTLSGIIDFYFACNDLFAYDVAVCLNAWCFEADGAFN ATKGRALLAGYQAVRPMEAAEVEALPQLARGAALRFLLTRLVDWLNVPEGALVRPKDPLEYLRKLRFHRAVASARDYGLA A >Mature_320_residues AVYTDVSAASLSDYLAAYDIGTLVSYHGIAEGVENSNFLVQTTTASFILTLYEKRVDPADLPFFIGLMQHLAANGISCPQ PVAMRDGTMLGTLAGRPCAIVTFLPGVSVRKPTAANCGQLGRALAQLHLAGAGFEITRRNALSVSGWRPLFEAAGPRTDT VHPGLAAIITEELAAHEAHWPAALPAGVIHADLFPDNAFFLDDTLSGIIDFYFACNDLFAYDVAVCLNAWCFEADGAFNA TKGRALLAGYQAVRPMEAAEVEALPQLARGAALRFLLTRLVDWLNVPEGALVRPKDPLEYLRKLRFHRAVASARDYGLAA
Specific function: Unknown
COG id: COG2334
COG function: function code R; Putative homoserine kinase type II (protein kinase fold)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudomonas-type thrB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KHSE_AZOC5 (A8HX69)
Other databases:
- EMBL: AP009384 - RefSeq: YP_001524383.1 - ProteinModelPortal: A8HX69 - SMR: A8HX69 - GeneID: 5688245 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_1467 - HOGENOM: HBG309377 - OMA: ADLFRDN - ProtClustDB: PRK05231 - BioCyc: ACAU438753:AZC_1467-MONOMER - HAMAP: MF_00301 - InterPro: IPR002575 - InterPro: IPR005280 - InterPro: IPR011009 - TIGRFAMs: TIGR00938
Pfam domain/function: PF01636 APH; SSF56112 Kinase_like
EC number: =2.7.1.39
Molecular weight: Translated: 34480; Mature: 34349
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVYTDVSAASLSDYLAAYDIGTLVSYHGIAEGVENSNFLVQTTTASFILTLYEKRVDPA CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCC DLPFFIGLMQHLAANGISCPQPVAMRDGTMLGTLAGRPCAIVTFLPGVSVRKPTAANCGQ CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCHHH LGRALAQLHLAGAGFEITRRNALSVSGWRPLFEAAGPRTDTVHPGLAAIITEELAAHEAH HHHHHHHHHHCCCCEEEECCCCEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC WPAALPAGVIHADLFPDNAFFLDDTLSGIIDFYFACNDLFAYDVAVCLNAWCFEADGAFN CCCCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC ATKGRALLAGYQAVRPMEAAEVEALPQLARGAALRFLLTRLVDWLNVPEGALVRPKDPLE CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHH YLRKLRFHRAVASARDYGLAA HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AVYTDVSAASLSDYLAAYDIGTLVSYHGIAEGVENSNFLVQTTTASFILTLYEKRVDPA CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCC DLPFFIGLMQHLAANGISCPQPVAMRDGTMLGTLAGRPCAIVTFLPGVSVRKPTAANCGQ CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCHHH LGRALAQLHLAGAGFEITRRNALSVSGWRPLFEAAGPRTDTVHPGLAAIITEELAAHEAH HHHHHHHHHHCCCCEEEECCCCEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC WPAALPAGVIHADLFPDNAFFLDDTLSGIIDFYFACNDLFAYDVAVCLNAWCFEADGAFN CCCCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC ATKGRALLAGYQAVRPMEAAEVEALPQLARGAALRFLLTRLVDWLNVPEGALVRPKDPLE CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHH YLRKLRFHRAVASARDYGLAA HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA