Definition | Frankia sp. EAN1pec chromosome, complete genome. |
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Accession | NC_009921 |
Length | 8,982,042 |
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The map label for this gene is 158313679
Identifier: 158313679
GI number: 158313679
Start: 2211851
End: 2212291
Strand: Direct
Name: 158313679
Synonym: Franean1_1843
Alternate gene names: NA
Gene position: 2211851-2212291 (Clockwise)
Preceding gene: 158313678
Following gene: 158313680
Centisome position: 24.63
GC content: 74.6
Gene sequence:
>441_bases GTGAGCCGCCTCGGTCACTTCGGCGGTCTGGGCCACTTCAGCTACCTCGCGGTGCTGCTGGGGTGCCTGGTGGCGACGGC GCCGCTGGAGATCCTGCTGCGGACGAGGGTGTATGCGCGCCCCCGCCGCCTCCTGCTGTCGGTGGCGCCGGTGCTGGTCG TCTTCGTCGGGTGGGATCTGTACGCGATCGCGCGCGGCCACTGGGAGTTCGACCCGCGGCGCACCACCGGGGTGCTGCTG CCCGGCGGCCTCCCGCTCGACGAGGTCCTCTTCTTCGTCGTGGTCCCCGTGTGTGCCGTGCTCGCGCTGGAGGCCGTGCG TGCCGTCACCGGCTGGCAGGCGGGCGACGAGCGGGCTGGCGCCGAACAGGTGGACGGCGAGCAGGTGGACGGCGAGCGTG CCGGCGACAGGCCGGCGGACGGGGCCCGCGGGCCGGGATGA
Upstream 100 bases:
>100_bases GTGGTGGTGCGGGGCATCGCCGAGGCCGCGGATCCGGGAGCCGCCGCCACCGCGCTCGCCGAACGCCTGCGCTCGGCCTG ACCGGGGGAGGGCGTCCGCG
Downstream 100 bases:
>100_bases GCTACACCGCGCTGGCCGTCGTGGGCGTCGCCGTGAGCGTGCTGCTGGACCTGCGGATCCTGCGTACCCGGCTGCTCACC CGCCGGCTGTTCTGGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSRLGHFGGLGHFSYLAVLLGCLVATAPLEILLRTRVYARPRRLLLSVAPVLVVFVGWDLYAIARGHWEFDPRRTTGVLL PGGLPLDEVLFFVVVPVCAVLALEAVRAVTGWQAGDERAGAEQVDGEQVDGERAGDRPADGARGPG
Sequences:
>Translated_146_residues MSRLGHFGGLGHFSYLAVLLGCLVATAPLEILLRTRVYARPRRLLLSVAPVLVVFVGWDLYAIARGHWEFDPRRTTGVLL PGGLPLDEVLFFVVVPVCAVLALEAVRAVTGWQAGDERAGAEQVDGEQVDGERAGDRPADGARGPG >Mature_145_residues SRLGHFGGLGHFSYLAVLLGCLVATAPLEILLRTRVYARPRRLLLSVAPVLVVFVGWDLYAIARGHWEFDPRRTTGVLLP GGLPLDEVLFFVVVPVCAVLALEAVRAVTGWQAGDERAGAEQVDGEQVDGERAGDRPADGARGPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15642; Mature: 15511
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLGHFGGLGHFSYLAVLLGCLVATAPLEILLRTRVYARPRRLLLSVAPVLVVFVGWDL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAIARGHWEFDPRRTTGVLLPGGLPLDEVLFFVVVPVCAVLALEAVRAVTGWQAGDERAG HHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AEQVDGEQVDGERAGDRPADGARGPG CHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRLGHFGGLGHFSYLAVLLGCLVATAPLEILLRTRVYARPRRLLLSVAPVLVVFVGWDL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAIARGHWEFDPRRTTGVLLPGGLPLDEVLFFVVVPVCAVLALEAVRAVTGWQAGDERAG HHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AEQVDGEQVDGERAGDRPADGARGPG CHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA