Definition | Frankia sp. EAN1pec chromosome, complete genome. |
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Accession | NC_009921 |
Length | 8,982,042 |
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The map label for this gene is thiE [H]
Identifier: 158313678
GI number: 158313678
Start: 2211142
End: 2211831
Strand: Direct
Name: thiE [H]
Synonym: Franean1_1842
Alternate gene names: 158313678
Gene position: 2211142-2211831 (Clockwise)
Preceding gene: 158313677
Following gene: 158313679
Centisome position: 24.62
GC content: 76.52
Gene sequence:
>690_bases GTGCCGTCGCCGGGGGCTGAGCCGCTGCGCGCGCGTCGGCTGGCCCGCCTGCTTGACGCCCGCCTCTACCTGTGCACCGC GCGTCGCGGCGACGAGGGAAGCTTCCTCGAGGACGTGCTCGGCCTGCCGGGCGCGCCCGCCGTCGACCTCGTCCAGCTCC GGGAGAAGGGGCTGGAGTGGCGCGAGGAGCTCGCCGGGCTGGCCCGGATGCGGGAGGCCGCGGACCGGGTCGGTGCCCTG GTCAGCGCCAACGACCGGGCCGACGTCGCAGCCTTCGCGGGCGTCGACATCCTGCATGTGGGGCAGGACGACATCCCGCC GCGGCTGGCGCGGACCATCGTCGGGGCGGACGCGCTCATCGGGCTGTCCACGCATGATCCCGAGCAGTTCCTGGCCGCGC TCGCGGACCCGGACGTCGACTACGTGTGCGTCGGCCCGGTGCACGCCACGCCGACCAAGGAGGGCCGTCCACCGGTCGGG ATGGGCCTGCCGCGGCTCGCCGCGCGGCACGCCCCGCCGTTCGAGCCGGGGGCCAAACCCTGGTTCGTCACCGGCGGTGT GGACGCGCGGACCCTGGACGCCATCCTCGAGACCGGCGCGCGCCGGGTCGTGGTGGTGCGGGGCATCGCCGAGGCCGCGG ATCCGGGAGCCGCCGCCACCGCGCTCGCCGAACGCCTGCGCTCGGCCTGA
Upstream 100 bases:
>100_bases CGGCCCGGCTCGGTGGTCGTGGAACTGCGCGGCACCGCGCTCACCCCGTCGGAGATGCCTTCGGTCCACCTGGCCGACGG CGACACCCTGGAGATCGTCC
Downstream 100 bases:
>100_bases CCGGGGGAGGGCGTCCGCGGTGAGCCGCCTCGGTCACTTCGGCGGTCTGGGCCACTTCAGCTACCTCGCGGTGCTGCTGG GGTGCCTGGTGGCGACGGCG
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MPSPGAEPLRARRLARLLDARLYLCTARRGDEGSFLEDVLGLPGAPAVDLVQLREKGLEWREELAGLARMREAADRVGAL VSANDRADVAAFAGVDILHVGQDDIPPRLARTIVGADALIGLSTHDPEQFLAALADPDVDYVCVGPVHATPTKEGRPPVG MGLPRLAARHAPPFEPGAKPWFVTGGVDARTLDAILETGARRVVVVRGIAEAADPGAAATALAERLRSA
Sequences:
>Translated_229_residues MPSPGAEPLRARRLARLLDARLYLCTARRGDEGSFLEDVLGLPGAPAVDLVQLREKGLEWREELAGLARMREAADRVGAL VSANDRADVAAFAGVDILHVGQDDIPPRLARTIVGADALIGLSTHDPEQFLAALADPDVDYVCVGPVHATPTKEGRPPVG MGLPRLAARHAPPFEPGAKPWFVTGGVDARTLDAILETGARRVVVVRGIAEAADPGAAATALAERLRSA >Mature_228_residues PSPGAEPLRARRLARLLDARLYLCTARRGDEGSFLEDVLGLPGAPAVDLVQLREKGLEWREELAGLARMREAADRVGALV SANDRADVAAFAGVDILHVGQDDIPPRLARTIVGADALIGLSTHDPEQFLAALADPDVDYVCVGPVHATPTKEGRPPVGM GLPRLAARHAPPFEPGAKPWFVTGGVDARTLDAILETGARRVVVVRGIAEAADPGAAATALAERLRSA
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325042, Length=191, Percent_Identity=30.8900523560209, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 24118; Mature: 23987
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPGAEPLRARRLARLLDARLYLCTARRGDEGSFLEDVLGLPGAPAVDLVQLREKGLEW CCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCHHH REELAGLARMREAADRVGALVSANDRADVAAFAGVDILHVGQDDIPPRLARTIVGADALI HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHEE GLSTHDPEQFLAALADPDVDYVCVGPVHATPTKEGRPPVGMGLPRLAARHAPPFEPGAKP ECCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC WFVTGGVDARTLDAILETGARRVVVVRGIAEAADPGAAATALAERLRSA EEEECCCCHHHHHHHHHCCCCEEEEEECHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure PSPGAEPLRARRLARLLDARLYLCTARRGDEGSFLEDVLGLPGAPAVDLVQLREKGLEW CCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCHHH REELAGLARMREAADRVGALVSANDRADVAAFAGVDILHVGQDDIPPRLARTIVGADALI HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHEE GLSTHDPEQFLAALADPDVDYVCVGPVHATPTKEGRPPVGMGLPRLAARHAPPFEPGAKP ECCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC WFVTGGVDARTLDAILETGARRVVVVRGIAEAADPGAAATALAERLRSA EEEECCCCHHHHHHHHHCCCCEEEEEECHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA