Definition | Frankia sp. EAN1pec chromosome, complete genome. |
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Accession | NC_009921 |
Length | 8,982,042 |
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The map label for this gene is 158313680
Identifier: 158313680
GI number: 158313680
Start: 2212288
End: 2212590
Strand: Direct
Name: 158313680
Synonym: Franean1_1844
Alternate gene names: NA
Gene position: 2212288-2212590 (Clockwise)
Preceding gene: 158313679
Following gene: 158313681
Centisome position: 24.63
GC content: 65.35
Gene sequence:
>303_bases ATGAGCTACACCGCGCTGGCCGTCGTGGGCGTCGCCGTGAGCGTGCTGCTGGACCTGCGGATCCTGCGTACCCGGCTGCT CACCCGCCGGCTGTTCTGGACGGCTTACGCGATCATCGTCTTCTTCCAGCTCGTCACGAACGGCATTCTGACCGGCTTCG ACATCGTCGTGTACGACCCGGACGCGATCGCCGGGCCCCGCCTCGTGTTCGCGCCGGTCGAGGACCTGCTGTTCGGGTTC GCGTTGGTAACCCAGACGCTGGTGTGGTGGGTTTGGTGGGGACTTCGTCACGGAAACGAGTGA
Upstream 100 bases:
>100_bases AGGCGGGCGACGAGCGGGCTGGCGCCGAACAGGTGGACGGCGAGCAGGTGGACGGCGAGCGTGCCGGCGACAGGCCGGCG GACGGGGCCCGCGGGCCGGG
Downstream 100 bases:
>100_bases ATCGGGGTCCTGCATCCACTTTTGGGCCTACGCTCGGACCCGATGGCACAACGGATGGCGGACGAGATCAGTCCCGCTGG CCGGCACCGTTCTCCCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSYTALAVVGVAVSVLLDLRILRTRLLTRRLFWTAYAIIVFFQLVTNGILTGFDIVVYDPDAIAGPRLVFAPVEDLLFGF ALVTQTLVWWVWWGLRHGNE
Sequences:
>Translated_100_residues MSYTALAVVGVAVSVLLDLRILRTRLLTRRLFWTAYAIIVFFQLVTNGILTGFDIVVYDPDAIAGPRLVFAPVEDLLFGF ALVTQTLVWWVWWGLRHGNE >Mature_99_residues SYTALAVVGVAVSVLLDLRILRTRLLTRRLFWTAYAIIVFFQLVTNGILTGFDIVVYDPDAIAGPRLVFAPVEDLLFGFA LVTQTLVWWVWWGLRHGNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11340; Mature: 11208
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYTALAVVGVAVSVLLDLRILRTRLLTRRLFWTAYAIIVFFQLVTNGILTGFDIVVYDP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECC DAIAGPRLVFAPVEDLLFGFALVTQTLVWWVWWGLRHGNE CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SYTALAVVGVAVSVLLDLRILRTRLLTRRLFWTAYAIIVFFQLVTNGILTGFDIVVYDP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECC DAIAGPRLVFAPVEDLLFGFALVTQTLVWWVWWGLRHGNE CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA