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The map label for this gene is rsgA [H]

Identifier: 157963362

GI number: 157963362

Start: 4333117

End: 4334181

Strand: Direct

Name: rsgA [H]

Synonym: Spea_3548

Alternate gene names: 157963362

Gene position: 4333117-4334181 (Clockwise)

Preceding gene: 157963326

Following gene: 157963363

Centisome position: 83.74

GC content: 45.63

Gene sequence:

>1065_bases
GTGAGTAAAAAGAAACCGCTAAGCCATGGTCAATTACGCAGAATGCGGACCAACCAAAAAAAGAAATTACAGAGCCACGA
TGCAGGTGAAACTACTGACTTACAAGACAGTATGTTAGGCCCTGAGCAACAAGGCACCATTATTTCACGCTTCGGCCAAC
ACGCTGACGTCGAGACTGACTCTGGCCACCTTGCTCGCTGTAATATTCGCCGTAATATTAAGAGCCTAGTGACTGGTGAT
AACGTTATCGTTCGTTTAGCACTGACCAGTGAGTCAGGGGCTAGTCGTATCGAAGGTATTGTTGAAGCTGTGCATCCAAG
GCACTCTCAGCTCTCACGCCCAGATCTTTACGATGGCGTGAAAATCATTGCTGCGAACATCGATCAGATTTTAATTGTCA
CTTCTGTAAAGCCAGCATTTACCACCCAGATTATTGATCGCTACCTAGTCGCGGCTGAAGATACTGGTATCGAACCTGTC
ATCATCTTAAATAAAGTTGACTTGATAACGCCAGAAGAAGCGCCTGAGATCGATGCAGCGCTTGAGAGATATAAGAGCAT
TGGCTATCGAGTCTATCGAGTGAGTAGCAAAACAGGTGAAGGTGTTGAACAGCTTCATGCCTTGATGAACGACAAAGTAA
ACGTGTTTGTTGGTCAATCGGGTGTAGGTAAATCTTCAATGATTAACGCCATGATGCCAGATGCAGAGCTTATTACTGGT
GATATTTCTGAGAACTCAGGGCTAGGTCAGCACACGACCACCACGGCAAAACTTCTGCATATTTCAACTGGCGGAGATTT
AATTGACTCTCCTGGTGTGCGAGAATTCGCGCTATGGCACCTGCCCGCTGACAGAGTCGGCTGGTGTTTCGTTGAATTTA
GAGATTATTTAGGTACTTGTAAATTTAGAGACTGCAAACACTTAAACGATCCAGGATGCTCGATTACCGAAGCGTTCAAT
GCCGGTGAGATCACTGAAGACAGATACAATAATTACCATCGTATTATTGCCAGTCTGGATGAGCAAAGACACGCTCGTCA
CTTTAGAGCCGGTCCTGACGAGTAG

Upstream 100 bases:

>100_bases
TTTTCCTGTTAGCCTAAATTCAGGCTTTTTTATTCTAGACCGTGTATCATACTGCTTTTTTAAGCAACACAAAATCACCT
TTATCATTGAAGACTAATAC

Downstream 100 bases:

>100_bases
TCAGTCGATACTAGTTAAGTAATTGAAGCAAAGATATTCAAACCAGCGATAAGCTTAAATATGAATTTTCCTGCGGCAAT
TTATGCCGTAACACAGTAAG

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSKKKPLSHGQLRRMRTNQKKKLQSHDAGETTDLQDSMLGPEQQGTIISRFGQHADVETDSGHLARCNIRRNIKSLVTGD
NVIVRLALTSESGASRIEGIVEAVHPRHSQLSRPDLYDGVKIIAANIDQILIVTSVKPAFTTQIIDRYLVAAEDTGIEPV
IILNKVDLITPEEAPEIDAALERYKSIGYRVYRVSSKTGEGVEQLHALMNDKVNVFVGQSGVGKSSMINAMMPDAELITG
DISENSGLGQHTTTTAKLLHISTGGDLIDSPGVREFALWHLPADRVGWCFVEFRDYLGTCKFRDCKHLNDPGCSITEAFN
AGEITEDRYNNYHRIIASLDEQRHARHFRAGPDE

Sequences:

>Translated_354_residues
MSKKKPLSHGQLRRMRTNQKKKLQSHDAGETTDLQDSMLGPEQQGTIISRFGQHADVETDSGHLARCNIRRNIKSLVTGD
NVIVRLALTSESGASRIEGIVEAVHPRHSQLSRPDLYDGVKIIAANIDQILIVTSVKPAFTTQIIDRYLVAAEDTGIEPV
IILNKVDLITPEEAPEIDAALERYKSIGYRVYRVSSKTGEGVEQLHALMNDKVNVFVGQSGVGKSSMINAMMPDAELITG
DISENSGLGQHTTTTAKLLHISTGGDLIDSPGVREFALWHLPADRVGWCFVEFRDYLGTCKFRDCKHLNDPGCSITEAFN
AGEITEDRYNNYHRIIASLDEQRHARHFRAGPDE
>Mature_353_residues
SKKKPLSHGQLRRMRTNQKKKLQSHDAGETTDLQDSMLGPEQQGTIISRFGQHADVETDSGHLARCNIRRNIKSLVTGDN
VIVRLALTSESGASRIEGIVEAVHPRHSQLSRPDLYDGVKIIAANIDQILIVTSVKPAFTTQIIDRYLVAAEDTGIEPVI
ILNKVDLITPEEAPEIDAALERYKSIGYRVYRVSSKTGEGVEQLHALMNDKVNVFVGQSGVGKSSMINAMMPDAELITGD
ISENSGLGQHTTTTAKLLHISTGGDLIDSPGVREFALWHLPADRVGWCFVEFRDYLGTCKFRDCKHLNDPGCSITEAFNA
GEITEDRYNNYHRIIASLDEQRHARHFRAGPDE

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=349, Percent_Identity=52.4355300859599, Blast_Score=372, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 39210; Mature: 39079

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKKPLSHGQLRRMRTNQKKKLQSHDAGETTDLQDSMLGPEQQGTIISRFGQHADVETD
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCC
SGHLARCNIRRNIKSLVTGDNVIVRLALTSESGASRIEGIVEAVHPRHSQLSRPDLYDGV
CCCEEEEHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCHHCCCCCCHHCCC
KIIAANIDQILIVTSVKPAFTTQIIDRYLVAAEDTGIEPVIILNKVDLITPEEAPEIDAA
EEEEECCCEEEEEECCCHHHHHHHHHHHHHEECCCCCCEEEEEECEEEECCCCCCHHHHH
LERYKSIGYRVYRVSSKTGEGVEQLHALMNDKVNVFVGQSGVGKSSMINAMMPDAELITG
HHHHHHCCEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCEEEC
DISENSGLGQHTTTTAKLLHISTGGDLIDSPGVREFALWHLPADRVGWCFVEFRDYLGTC
CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHEEHHHHHCCC
KFRDCKHLNDPGCSITEAFNAGEITEDRYNNYHRIIASLDEQRHARHFRAGPDE
CCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKKKPLSHGQLRRMRTNQKKKLQSHDAGETTDLQDSMLGPEQQGTIISRFGQHADVETD
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCC
SGHLARCNIRRNIKSLVTGDNVIVRLALTSESGASRIEGIVEAVHPRHSQLSRPDLYDGV
CCCEEEEHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCHHCCCCCCHHCCC
KIIAANIDQILIVTSVKPAFTTQIIDRYLVAAEDTGIEPVIILNKVDLITPEEAPEIDAA
EEEEECCCEEEEEECCCHHHHHHHHHHHHHEECCCCCCEEEEEECEEEECCCCCCHHHHH
LERYKSIGYRVYRVSSKTGEGVEQLHALMNDKVNVFVGQSGVGKSSMINAMMPDAELITG
HHHHHHCCEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCEEEC
DISENSGLGQHTTTTAKLLHISTGGDLIDSPGVREFALWHLPADRVGWCFVEFRDYLGTC
CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHEEHHHHHCCC
KFRDCKHLNDPGCSITEAFNAGEITEDRYNNYHRIIASLDEQRHARHFRAGPDE
CCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]