| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is kcsA [H]
Identifier: 157963299
GI number: 157963299
Start: 4256343
End: 4257140
Strand: Direct
Name: kcsA [H]
Synonym: Spea_3485
Alternate gene names: 157963299
Gene position: 4256343-4257140 (Clockwise)
Preceding gene: 157963298
Following gene: 157963301
Centisome position: 82.25
GC content: 46.49
Gene sequence:
>798_bases ATGGCAAATAAAAAGCGCTGGCTACTTCAGCCTGAAACGCCCCCTACCCCGATTCAACTTGCGATGATGTTACTGTCATT ACTGTCGGTGATAGTGGTGCTAGTACTGACATTCGGTCGCGTCGATGGCGAAACCAAGCGCCTTTTGTTTATGATAGATT TCAGTATCTGTCTTATCTTCATGTCTAACTTCTTTTTTGAACTGTTCAAAGCCAACGAAAAAGCCAGCTATTTAAAGCAC CACTGGATAGATTTCGTCGCCAGTATTCCCGCCATTGAAGCCCTTAGAATGGCGCGTCTGTTCCAGATCCTACGAGTTAT CCGTCTCATTCGCATGAGCCGCTCATTGATTGTTCCTATGCTGAAACAGCGTAGGCAAGCGACGATAGCGAGCTTATTAG TTGCTCTCATCACCATTTTAACCTTTGCTTCAGTGCTAGTGCTGATTGTTGAGAGCGGCGTAGAAGGTGCCAATATCGAT ACCGCCGAGAGTGCAATTTGGTGGGCCTTAGTGACAATATCGACTGTAGGTTATGGTGATTATTACCCTGTGACGACAGC AGGCCATATCATAGGTGGTGTGGTGATTGTTTGTGGCGTCAGTTTCTTCGGTGTGATTTCAGGTTATATGGCATCGGTTT TTGTCGCGCCCGATGAAGCAGAGAAGCTCGATAGCCATACAGAAGAAATTCGCTCAGAGCTTAATACCAGCCTTGCGCGC ATGGAGGCGAATCAAGAGAAGTTGATCGCCGAGCTCAATGAGCTAAAACAAGCCATCGAAGATAAGAAGCCTGAATAA
Upstream 100 bases:
>100_bases TATGTGTTAGATGATTTAATACAATTTAGTGCTGATAAATAGGCACAAAACACGGTGCCAGATGGATATTAACTGGCGCC TCTAAAGATGGACCTAATCG
Downstream 100 bases:
>100_bases TTTAGGAAATCAGAAGCTGCTCCTGAATTTGTGTCTTTCTGAGTCTAAGTCGTAAAAAAGCCCACATCAATGTGGGCTTT TTTACGACTGCAGTTACCCG
Product: Ion transport 2 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MANKKRWLLQPETPPTPIQLAMMLLSLLSVIVVLVLTFGRVDGETKRLLFMIDFSICLIFMSNFFFELFKANEKASYLKH HWIDFVASIPAIEALRMARLFQILRVIRLIRMSRSLIVPMLKQRRQATIASLLVALITILTFASVLVLIVESGVEGANID TAESAIWWALVTISTVGYGDYYPVTTAGHIIGGVVIVCGVSFFGVISGYMASVFVAPDEAEKLDSHTEEIRSELNTSLAR MEANQEKLIAELNELKQAIEDKKPE
Sequences:
>Translated_265_residues MANKKRWLLQPETPPTPIQLAMMLLSLLSVIVVLVLTFGRVDGETKRLLFMIDFSICLIFMSNFFFELFKANEKASYLKH HWIDFVASIPAIEALRMARLFQILRVIRLIRMSRSLIVPMLKQRRQATIASLLVALITILTFASVLVLIVESGVEGANID TAESAIWWALVTISTVGYGDYYPVTTAGHIIGGVVIVCGVSFFGVISGYMASVFVAPDEAEKLDSHTEEIRSELNTSLAR MEANQEKLIAELNELKQAIEDKKPE >Mature_264_residues ANKKRWLLQPETPPTPIQLAMMLLSLLSVIVVLVLTFGRVDGETKRLLFMIDFSICLIFMSNFFFELFKANEKASYLKHH WIDFVASIPAIEALRMARLFQILRVIRLIRMSRSLIVPMLKQRRQATIASLLVALITILTFASVLVLIVESGVEGANIDT AESAIWWALVTISTVGYGDYYPVTTAGHIIGGVVIVCGVSFFGVISGYMASVFVAPDEAEKLDSHTEEIRSELNTSLARM EANQEKLIAELNELKQAIEDKKPE
Specific function: Acts as a potassium ion channel [H]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the potassium channel family [H]
Homologues:
Organism=Homo sapiens, GI26051264, Length=144, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI26051268, Length=148, Percent_Identity=31.7567567567568, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI26051260, Length=144, Percent_Identity=32.6388888888889, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI26051266, Length=144, Percent_Identity=32.6388888888889, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI26051262, Length=144, Percent_Identity=32.6388888888889, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI236462242, Length=148, Percent_Identity=29.7297297297297, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI236461942, Length=148, Percent_Identity=29.7297297297297, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI236461719, Length=148, Percent_Identity=29.7297297297297, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI236462079, Length=148, Percent_Identity=29.7297297297297, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI119395748, Length=186, Percent_Identity=31.1827956989247, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI28373065, Length=148, Percent_Identity=29.7297297297297, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI88758565, Length=240, Percent_Identity=27.5, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI26638655, Length=147, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI26638653, Length=147, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI27436981, Length=168, Percent_Identity=29.1666666666667, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI25952087, Length=110, Percent_Identity=34.5454545454545, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4826784, Length=104, Percent_Identity=35.5769230769231, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI27436974, Length=104, Percent_Identity=35.5769230769231, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI25952092, Length=189, Percent_Identity=30.6878306878307, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI25952108, Length=230, Percent_Identity=26.0869565217391, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI4504821, Length=110, Percent_Identity=34.5454545454545, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI4758630, Length=167, Percent_Identity=28.1437125748503, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI4826782, Length=181, Percent_Identity=28.1767955801105, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI19424136, Length=129, Percent_Identity=36.4341085271318, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI27436993, Length=113, Percent_Identity=32.7433628318584, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI19071574, Length=113, Percent_Identity=32.7433628318584, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI32479525, Length=142, Percent_Identity=28.8732394366197, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI4504817, Length=110, Percent_Identity=32.7272727272727, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI32479527, Length=142, Percent_Identity=28.8732394366197, Blast_Score=65, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71989361, Length=111, Percent_Identity=36.9369369369369, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI71989369, Length=107, Percent_Identity=37.3831775700935, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI71989381, Length=107, Percent_Identity=37.3831775700935, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI71989376, Length=107, Percent_Identity=37.3831775700935, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI25147242, Length=138, Percent_Identity=31.8840579710145, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI25147238, Length=138, Percent_Identity=31.8840579710145, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI25148255, Length=113, Percent_Identity=34.5132743362832, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193206869, Length=113, Percent_Identity=34.5132743362832, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI32564066, Length=172, Percent_Identity=28.4883720930233, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17544122, Length=168, Percent_Identity=27.3809523809524, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71994313, Length=106, Percent_Identity=33.9622641509434, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI221330119, Length=138, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI281363095, Length=138, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI221330117, Length=138, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI281363097, Length=138, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI161084970, Length=171, Percent_Identity=29.2397660818713, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI17737641, Length=171, Percent_Identity=29.2397660818713, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI45555859, Length=110, Percent_Identity=34.5454545454545, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45549143, Length=110, Percent_Identity=34.5454545454545, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24642910, Length=110, Percent_Identity=34.5454545454545, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24642916, Length=110, Percent_Identity=34.5454545454545, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24642914, Length=110, Percent_Identity=34.5454545454545, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007764, Length=111, Percent_Identity=31.5315315315315, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI281365536, Length=111, Percent_Identity=31.5315315315315, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24656294, Length=111, Percent_Identity=31.5315315315315, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24656289, Length=111, Percent_Identity=31.5315315315315, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 - InterPro: IPR003091 [H]
Pfam domain/function: PF07885 Ion_trans_2 [H]
EC number: NA
Molecular weight: Translated: 29635; Mature: 29504
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKKRWLLQPETPPTPIQLAMMLLSLLSVIVVLVLTFGRVDGETKRLLFMIDFSICLIF CCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH MSNFFFELFKANEKASYLKHHWIDFVASIPAIEALRMARLFQILRVIRLIRMSRSLIVPM HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQRRQATIASLLVALITILTFASVLVLIVESGVEGANIDTAESAIWWALVTISTVGYGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC YYPVTTAGHIIGGVVIVCGVSFFGVISGYMASVFVAPDEAEKLDSHTEEIRSELNTSLAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH MEANQEKLIAELNELKQAIEDKKPE HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ANKKRWLLQPETPPTPIQLAMMLLSLLSVIVVLVLTFGRVDGETKRLLFMIDFSICLIF CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH MSNFFFELFKANEKASYLKHHWIDFVASIPAIEALRMARLFQILRVIRLIRMSRSLIVPM HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQRRQATIASLLVALITILTFASVLVLIVESGVEGANIDTAESAIWWALVTISTVGYGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC YYPVTTAGHIIGGVVIVCGVSFFGVISGYMASVFVAPDEAEKLDSHTEEIRSELNTSLAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH MEANQEKLIAELNELKQAIEDKKPE HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]