| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963298
Identifier: 157963298
GI number: 157963298
Start: 4255955
End: 4256284
Strand: Direct
Name: 157963298
Synonym: Spea_3484
Alternate gene names: NA
Gene position: 4255955-4256284 (Clockwise)
Preceding gene: 157963297
Following gene: 157963299
Centisome position: 82.25
GC content: 42.73
Gene sequence:
>330_bases ATGACCAAACAAACAAAGACCTTACCTGCACAGTGGCAACAGAACCAAAAAGCAGCCAAGGCGACACAAATTGCCTTCGA TCTGGATGAAAAATTCCAATATGCTATTCGTAAAGCCGCGCTCGATGCAGGTGTAAGCCCATCGGATCAGATCAGGGAAA TACTTGGCTTAACTGTGACTAAACGCCCTAAGCGTCCTCGCCTTACTGTATCGCTCAGCCCGACTGATTATGAAATGTTG GCCGAGAAATATAACCTCTCTGCCGATCAGCAACTTGAAATTAAAAAGTATGTGTTAGATGATTTAATACAATTTAGTGC TGATAAATAG
Upstream 100 bases:
>100_bases GTAAATCTAGAACCATTTTTGTTTCAACTCCGATGAGTGGTAGCATAGGAGAGATCCCGTAGCTTGTTAATACGGATTGG TAAATTTAGGTATCGCACGC
Downstream 100 bases:
>100_bases GCACAAAACACGGTGCCAGATGGATATTAACTGGCGCCTCTAAAGATGGACCTAATCGATGGCAAATAAAAAGCGCTGGC TACTTCAGCCTGAAACGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MTKQTKTLPAQWQQNQKAAKATQIAFDLDEKFQYAIRKAALDAGVSPSDQIREILGLTVTKRPKRPRLTVSLSPTDYEML AEKYNLSADQQLEIKKYVLDDLIQFSADK
Sequences:
>Translated_109_residues MTKQTKTLPAQWQQNQKAAKATQIAFDLDEKFQYAIRKAALDAGVSPSDQIREILGLTVTKRPKRPRLTVSLSPTDYEML AEKYNLSADQQLEIKKYVLDDLIQFSADK >Mature_108_residues TKQTKTLPAQWQQNQKAAKATQIAFDLDEKFQYAIRKAALDAGVSPSDQIREILGLTVTKRPKRPRLTVSLSPTDYEMLA EKYNLSADQQLEIKKYVLDDLIQFSADK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12416; Mature: 12285
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQTKTLPAQWQQNQKAAKATQIAFDLDEKFQYAIRKAALDAGVSPSDQIREILGLTVT CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC KRPKRPRLTVSLSPTDYEMLAEKYNLSADQQLEIKKYVLDDLIQFSADK CCCCCCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TKQTKTLPAQWQQNQKAAKATQIAFDLDEKFQYAIRKAALDAGVSPSDQIREILGLTVT CCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC KRPKRPRLTVSLSPTDYEMLAEKYNLSADQQLEIKKYVLDDLIQFSADK CCCCCCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA