| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963301
Identifier: 157963301
GI number: 157963301
Start: 4258965
End: 4259645
Strand: Direct
Name: 157963301
Synonym: Spea_3487
Alternate gene names: NA
Gene position: 4258965-4259645 (Clockwise)
Preceding gene: 157963299
Following gene: 157963302
Centisome position: 82.31
GC content: 43.17
Gene sequence:
>681_bases ATGCCAGTAAACTCTATTTTAGGCGTGTTTGCAAAATCGCCAATTAAGCCTCTTCAAGAGCATATCGACAAAGTATACGA CTGTGCGTCATTACTTGTCCCATTTTTTGAAGCTACTGTCGCAGGAGACTGGGACAAAGCCGTTCAATTGCGTAAGCAAA TTAGCTTTGCAGAGCAAGAAGCTGACTCACTAAAACGTGAGATCCGCCTAACTCTGCCTGGCGGTCTGTTTATGCCTGTT GAGCGCACTGACTTACTGGAGCTACTTACCCAGCAAGATAAGATTGCTAACAAAGCAAAAGACATTTCCGGCCGCGTCAT TGGCCGACAGTTAGAGTTACCTCTAGTCATTCAAGAACCATTTATTGCTTATTTACAGCGCTGCCTTGATGCAGTTTCTC TGTCAAAAGAAGCAATTAACGAACTCGATGATCTGTTAGAAACAGGTTTTAGAGGTCGTGAAGTGGATCTTGTCGCTAAA ATGATCGCAGAGTTAGATTCTATCGAAGAAGATACTGATGATTTACAGATTAAGATCCGTAGACAGCTTTTCTCCATCGA GTCTGAATTAAGCCCTGTAGATGTAATGTTCCTCTACAAGATAATTGAGTGGGTTGGTGACTTGGCAGATCTTGCTGAAC GAGTCGGTTCTCGCTTAGAGCTAATGTTAGCTCGCGTCTAA
Upstream 100 bases:
>100_bases GTCAATTTAAATCGTAAAACACAGTTTTCTTACGCGGCCGCTTGGGTTAACATGCGCCCGCTTTTTCCAATAGTGGAATA ACCAAAATAGGTACACGGCA
Downstream 100 bases:
>100_bases TCAAAAGATTATCAAGGTAACAACATGGTTGATGTATTAGTCACCAATGGCCCGTGGCTTATTGGTATTGCGGCTCTATT TGGTTTTTTAATGGCATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MPVNSILGVFAKSPIKPLQEHIDKVYDCASLLVPFFEATVAGDWDKAVQLRKQISFAEQEADSLKREIRLTLPGGLFMPV ERTDLLELLTQQDKIANKAKDISGRVIGRQLELPLVIQEPFIAYLQRCLDAVSLSKEAINELDDLLETGFRGREVDLVAK MIAELDSIEEDTDDLQIKIRRQLFSIESELSPVDVMFLYKIIEWVGDLADLAERVGSRLELMLARV
Sequences:
>Translated_226_residues MPVNSILGVFAKSPIKPLQEHIDKVYDCASLLVPFFEATVAGDWDKAVQLRKQISFAEQEADSLKREIRLTLPGGLFMPV ERTDLLELLTQQDKIANKAKDISGRVIGRQLELPLVIQEPFIAYLQRCLDAVSLSKEAINELDDLLETGFRGREVDLVAK MIAELDSIEEDTDDLQIKIRRQLFSIESELSPVDVMFLYKIIEWVGDLADLAERVGSRLELMLARV >Mature_225_residues PVNSILGVFAKSPIKPLQEHIDKVYDCASLLVPFFEATVAGDWDKAVQLRKQISFAEQEADSLKREIRLTLPGGLFMPVE RTDLLELLTQQDKIANKAKDISGRVIGRQLELPLVIQEPFIAYLQRCLDAVSLSKEAINELDDLLETGFRGREVDLVAKM IAELDSIEEDTDDLQIKIRRQLFSIESELSPVDVMFLYKIIEWVGDLADLAERVGSRLELMLARV
Specific function: Unknown
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002727 - InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 25555; Mature: 25424
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVNSILGVFAKSPIKPLQEHIDKVYDCASLLVPFFEATVAGDWDKAVQLRKQISFAEQE CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ADSLKREIRLTLPGGLFMPVERTDLLELLTQQDKIANKAKDISGRVIGRQLELPLVIQEP HHHHHHHEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCH FIAYLQRCLDAVSLSKEAINELDDLLETGFRGREVDLVAKMIAELDSIEEDTDDLQIKIR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH RQLFSIESELSPVDVMFLYKIIEWVGDLADLAERVGSRLELMLARV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PVNSILGVFAKSPIKPLQEHIDKVYDCASLLVPFFEATVAGDWDKAVQLRKQISFAEQE CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ADSLKREIRLTLPGGLFMPVERTDLLELLTQQDKIANKAKDISGRVIGRQLELPLVIQEP HHHHHHHEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCH FIAYLQRCLDAVSLSKEAINELDDLLETGFRGREVDLVAKMIAELDSIEEDTDDLQIKIR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH RQLFSIESELSPVDVMFLYKIIEWVGDLADLAERVGSRLELMLARV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]