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The map label for this gene is torT [H]

Identifier: 157963162

GI number: 157963162

Start: 4091116

End: 4092180

Strand: Direct

Name: torT [H]

Synonym: Spea_3346

Alternate gene names: 157963162

Gene position: 4091116-4092180 (Clockwise)

Preceding gene: 157963160

Following gene: 157963167

Centisome position: 79.06

GC content: 46.1

Gene sequence:

>1065_bases
ATGGTCAAAGTTTTGCAGCAGAGATTATTACTCGTTGTTGGCTTAAGTTTTTTAAGCCCTCTTGTTAATGCTGCGACAAC
GCCATCGTCTTGGTCTTTAGAGCAAAGAACGCCTTATGAAAAAGTATTACAGCAAACCACGCCCTTACAACTCACACCAC
TCACCTCGGCTAAGAAAAGTTGGCGCATTTGCGTCTTAGTGCCACATTTAAAAGACACCTACTGGACAGGTATTAACTAC
GGACTAGTGCAGCAGGCTAAAGCGCTAAGTCTTAAGCTGGAACTGTTCGAAGCTGGTGGTTATTACGGCCAAGATAAGCA
ACTGTCTCAACTCGATAACTGCATGAAACACGGCTTTGATGCCATCTTACTCGGTGGCGTTCGCCCTGATATTTTAGATT
TTTATCAAGCCCCCATCACTAAACCCGTTATCGCTCTCGTCAATCGACTCAAGCACCCAAAAGTAAATACTCGCGTGGGC
GTGAATTGGTACCAGATGGGCTTAAAAACAGGGGAATATATTAAGCAGCAAACCAAGAAGCCTACTACCCTCGCCCTATT
AACTGGCCCAGACAAACTCGGTGGTAGCGACTATGTTGAGCAAGGGTTATCTGCCGCCTTGAAAGACAGCTTGGTCTTTA
TTAGCGCAGTGCATCACGCCGATAATAATCGCAACCTGTATCGAGATGAGCTAGAGGCACTACTCGCTGAGCAGACGCCC
GATTACATTCTCGGCAGCGCCGTCGCCGTTGAAGCCGCGGTCAGCATACTGCGTCAACATCAGCTAAGCGGTAAAGTCAA
ACTGATAAGCAGCTATCTATCTCCAGCGGTTTTACGGGGAATATATCGTGGCAAAGTTGAATTCAGTAACGATGATCAGG
TGGTGTTGCAAGGAAGACTCGCCATTGATATTACGGTGCGAGAACTAGAGGGTGCAAAAGCCTTTGGCGATATAGGTCCT
AAAATCCAAAATCTATACCCTAGTCACATCAACAAAGAAGTGCTAAAAACCAGCTTACCACCAGCAGACTATTACCCCAT
TTATCGGGTCAATACTGGATATTGA

Upstream 100 bases:

>100_bases
GGGATTTTGGCAAGAACAATACACTCACTGTTATCTATTAAGCTGATACAATATTATACCAATTGCACTAAATATTTAAT
CAATTCATCAGGACGTAATC

Downstream 100 bases:

>100_bases
GCCGCACTTCTACTTTGAACTTCTACTTTAAACAAGGTCATTAACGTCTTGGTTACGATGGATTATCTGACTTTTACCTG
TAAACGCTAGTCTTTCACCT

Product: TMAO reductase system periplasmic protein TorT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MVKVLQQRLLLVVGLSFLSPLVNAATTPSSWSLEQRTPYEKVLQQTTPLQLTPLTSAKKSWRICVLVPHLKDTYWTGINY
GLVQQAKALSLKLELFEAGGYYGQDKQLSQLDNCMKHGFDAILLGGVRPDILDFYQAPITKPVIALVNRLKHPKVNTRVG
VNWYQMGLKTGEYIKQQTKKPTTLALLTGPDKLGGSDYVEQGLSAALKDSLVFISAVHHADNNRNLYRDELEALLAEQTP
DYILGSAVAVEAAVSILRQHQLSGKVKLISSYLSPAVLRGIYRGKVEFSNDDQVVLQGRLAIDITVRELEGAKAFGDIGP
KIQNLYPSHINKEVLKTSLPPADYYPIYRVNTGY

Sequences:

>Translated_354_residues
MVKVLQQRLLLVVGLSFLSPLVNAATTPSSWSLEQRTPYEKVLQQTTPLQLTPLTSAKKSWRICVLVPHLKDTYWTGINY
GLVQQAKALSLKLELFEAGGYYGQDKQLSQLDNCMKHGFDAILLGGVRPDILDFYQAPITKPVIALVNRLKHPKVNTRVG
VNWYQMGLKTGEYIKQQTKKPTTLALLTGPDKLGGSDYVEQGLSAALKDSLVFISAVHHADNNRNLYRDELEALLAEQTP
DYILGSAVAVEAAVSILRQHQLSGKVKLISSYLSPAVLRGIYRGKVEFSNDDQVVLQGRLAIDITVRELEGAKAFGDIGP
KIQNLYPSHINKEVLKTSLPPADYYPIYRVNTGY
>Mature_354_residues
MVKVLQQRLLLVVGLSFLSPLVNAATTPSSWSLEQRTPYEKVLQQTTPLQLTPLTSAKKSWRICVLVPHLKDTYWTGINY
GLVQQAKALSLKLELFEAGGYYGQDKQLSQLDNCMKHGFDAILLGGVRPDILDFYQAPITKPVIALVNRLKHPKVNTRVG
VNWYQMGLKTGEYIKQQTKKPTTLALLTGPDKLGGSDYVEQGLSAALKDSLVFISAVHHADNNRNLYRDELEALLAEQTP
DYILGSAVAVEAAVSILRQHQLSGKVKLISSYLSPAVLRGIYRGKVEFSNDDQVVLQGRLAIDITVRELEGAKAFGDIGP
KIQNLYPSHINKEVLKTSLPPADYYPIYRVNTGY

Specific function: Upon binding a putative inducer it probably interacts with torS and allows it to play a role in the induction of the torCAD operon for trimethylamine N-oxide reductase [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787228, Length=307, Percent_Identity=35.8306188925081, Blast_Score=198, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761
- InterPro:   IPR014301 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 39304; Mature: 39304

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVLQQRLLLVVGLSFLSPLVNAATTPSSWSLEQRTPYEKVLQQTTPLQLTPLTSAKKS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCC
WRICVLVPHLKDTYWTGINYGLVQQAKALSLKLELFEAGGYYGQDKQLSQLDNCMKHGFD
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHCCCC
AILLGGVRPDILDFYQAPITKPVIALVNRLKHPKVNTRVGVNWYQMGLKTGEYIKQQTKK
EEEECCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEECCHHHHHHCCHHHHHHHHCCC
PTTLALLTGPDKLGGSDYVEQGLSAALKDSLVFISAVHHADNNRNLYRDELEALLAEQTP
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
DYILGSAVAVEAAVSILRQHQLSGKVKLISSYLSPAVLRGIYRGKVEFSNDDQVVLQGRL
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEEEEE
AIDITVRELEGAKAFGDIGPKIQNLYPSHINKEVLKTSLPPADYYPIYRVNTGY
EEEEEEEECCCCHHHHHCCCHHHHCCHHHCCHHHHHHCCCCCCCCCEEEECCCC
>Mature Secondary Structure
MVKVLQQRLLLVVGLSFLSPLVNAATTPSSWSLEQRTPYEKVLQQTTPLQLTPLTSAKKS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCC
WRICVLVPHLKDTYWTGINYGLVQQAKALSLKLELFEAGGYYGQDKQLSQLDNCMKHGFD
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHCCCC
AILLGGVRPDILDFYQAPITKPVIALVNRLKHPKVNTRVGVNWYQMGLKTGEYIKQQTKK
EEEECCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEECCHHHHHHCCHHHHHHHHCCC
PTTLALLTGPDKLGGSDYVEQGLSAALKDSLVFISAVHHADNNRNLYRDELEALLAEQTP
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
DYILGSAVAVEAAVSILRQHQLSGKVKLISSYLSPAVLRGIYRGKVEFSNDDQVVLQGRL
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEEEEEE
AIDITVRELEGAKAFGDIGPKIQNLYPSHINKEVLKTSLPPADYYPIYRVNTGY
EEEEEEEECCCCHHHHHCCCHHHHCCHHHCCHHHHHHCCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]