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The map label for this gene is torD [H]

Identifier: 157963160

GI number: 157963160

Start: 4087154

End: 4087819

Strand: Direct

Name: torD [H]

Synonym: Spea_3344

Alternate gene names: 157963160

Gene position: 4087154-4087819 (Clockwise)

Preceding gene: 157963159

Following gene: 157963162

Centisome position: 78.99

GC content: 45.5

Gene sequence:

>666_bases
ATGATTAAAGATGCTGTGAACACAGAGACAGTAGAAGTTAACCCAGTTGATCAGGTTAGAAGCACGATTTATCAATTACT
TTCGTCACTATTTGCCAAAGAAATTGATCATAAGATTCTGCATGATTTAACCAGTGAGCAGGCGCAGCAGTTTTGGGCGC
AGCTGGGTAGCGAGGCTGAATTTAAAGCTGACGTCGATGTTTTAGTCGCCGAGCTTGCTAAGCTCAATACTGATAAAGCA
TTACTAGAGCTTGCCGCCGATTATTGTGGCTTGTTCTTGGTCGGTACTAAATACAGTGCATCGCCTTATGCCAGCTTGTA
CTTAGACGACAAGCCAGCAAAGAAAGGTGATGAGCCGCTACTCTTTGGTGAACAGCATCAGCAGATGACTCAGTTTTTAA
AACAGAGTCAACTGCAGGTACAAAGTGAGTTTCCAGAGCCTGCTGACCATCTAGCAGTGATCTTGGCCTATGTGGCTCAC
CTTTGTACTCATAGTGATGAAGCCGAGCAACACAGCTTTATCAAGGCCAACTTAGCTAACTGGTTAGGCAACTTTGTTGC
TAAGGTTACTGAGGTGGACACCGGCAACTTCTACCAAGCTTTGGCGCGCCTCACCTACTCTTGGGTGAAGTCTGATGCCG
AGTGGCTTGAGTCTGAATTGAACTAA

Upstream 100 bases:

>100_bases
CACAAGCTTGCTCGGCTTATACCTGCCTTGTTGACTACGAAAAGTATCAAGGTAAAGTACCAGCAGTAAGTTCATTTAGC
GGCCCGGTTGAGATTGCATT

Downstream 100 bases:

>100_bases
TCCCTCATCGATACTTTCAAAAAAGTATTCAAAAAGGGTGATGAACTGATGTTCATCACCCTTTTTTATGTCTGCAGACT
TATCAACTTATACTAACTTT

Product: chaperone protein TorD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MIKDAVNTETVEVNPVDQVRSTIYQLLSSLFAKEIDHKILHDLTSEQAQQFWAQLGSEAEFKADVDVLVAELAKLNTDKA
LLELAADYCGLFLVGTKYSASPYASLYLDDKPAKKGDEPLLFGEQHQQMTQFLKQSQLQVQSEFPEPADHLAVILAYVAH
LCTHSDEAEQHSFIKANLANWLGNFVAKVTEVDTGNFYQALARLTYSWVKSDAEWLESELN

Sequences:

>Translated_221_residues
MIKDAVNTETVEVNPVDQVRSTIYQLLSSLFAKEIDHKILHDLTSEQAQQFWAQLGSEAEFKADVDVLVAELAKLNTDKA
LLELAADYCGLFLVGTKYSASPYASLYLDDKPAKKGDEPLLFGEQHQQMTQFLKQSQLQVQSEFPEPADHLAVILAYVAH
LCTHSDEAEQHSFIKANLANWLGNFVAKVTEVDTGNFYQALARLTYSWVKSDAEWLESELN
>Mature_221_residues
MIKDAVNTETVEVNPVDQVRSTIYQLLSSLFAKEIDHKILHDLTSEQAQQFWAQLGSEAEFKADVDVLVAELAKLNTDKA
LLELAADYCGLFLVGTKYSASPYASLYLDDKPAKKGDEPLLFGEQHQQMTQFLKQSQLQVQSEFPEPADHLAVILAYVAH
LCTHSDEAEQHSFIKANLANWLGNFVAKVTEVDTGNFYQALARLTYSWVKSDAEWLESELN

Specific function: Involved in the biogenesis of torA. Acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor [H]

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family. TorD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787232, Length=203, Percent_Identity=33.9901477832512, Blast_Score=98, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023069
- InterPro:   IPR020945
- InterPro:   IPR009073 [H]

Pfam domain/function: PF02613 Nitrate_red_del [H]

EC number: NA

Molecular weight: Translated: 24813; Mature: 24813

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKDAVNTETVEVNPVDQVRSTIYQLLSSLFAKEIDHKILHDLTSEQAQQFWAQLGSEAE
CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FKADVDVLVAELAKLNTDKALLELAADYCGLFLVGTKYSASPYASLYLDDKPAKKGDEPL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCC
LFGEQHQQMTQFLKQSQLQVQSEFPEPADHLAVILAYVAHLCTHSDEAEQHSFIKANLAN
EECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
WLGNFVAKVTEVDTGNFYQALARLTYSWVKSDAEWLESELN
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKDAVNTETVEVNPVDQVRSTIYQLLSSLFAKEIDHKILHDLTSEQAQQFWAQLGSEAE
CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FKADVDVLVAELAKLNTDKALLELAADYCGLFLVGTKYSASPYASLYLDDKPAKKGDEPL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCC
LFGEQHQQMTQFLKQSQLQVQSEFPEPADHLAVILAYVAHLCTHSDEAEQHSFIKANLAN
EECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
WLGNFVAKVTEVDTGNFYQALARLTYSWVKSDAEWLESELN
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA