| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963167
Identifier: 157963167
GI number: 157963167
Start: 4095763
End: 4096413
Strand: Direct
Name: 157963167
Synonym: Spea_3351
Alternate gene names: NA
Gene position: 4095763-4096413 (Clockwise)
Preceding gene: 157963162
Following gene: 157963168
Centisome position: 79.15
GC content: 49.0
Gene sequence:
>651_bases ATGGATAGCAGCAAAAATATCAGCAACGAAGCTGACTCTATTAACGAACAAGCTTGCCATGACTTAATAGCACCGAGTGA GTGGCAAGGCTTCGATCAGGTACTACTTCAGCCTGTCGATAAACGCCATTACACCCAAGTGCTATGCGAAAGCCTGATAT TTGGCGGCATCGCGTTTATTGCAGTGTCTCTGGCCGTGTTCCTCCCCAGAGAGCTACAACTTCCTCTATTACTGGCCGTA CTGACTGGCCTACTACTATTATTGGCAACCGTTGGCTACTTGAGAGACCGACATGCCAAGTCGCTGGCTTACGCAACATG CGAACATGAACTTATTATGCAGAAAGGCTTTTGGTGGGTTAAACGTACCTCGCTTCCCTATTCGCGACTACAGCATGTTA GCCTGTCTCATGGCCCGCTTGAGCGCCATTTTAATCTATCCACCATCAAATGTTTCAGTGCGGGTAGCGGATCGGCTGAG ATTGAATTACCCGGTATAGAGCAAGATACAGCAGAACACCTGCGCCAGCATCTGCTCGCCCAAGCGGCGAAAGCCAATCC GCAACTACCGTTAGAAATGGCTTCGCAACAGAAGGAACTTGAAGATACCCCACAGACCATCACTCCGGAAAGGTCTAACG ATGACTCATAA
Upstream 100 bases:
>100_bases CTGTTCTGTTGCCAAATATGTCTCGCTGTAGCGGCAACGCCACAGATGCTGATATAGTCAAATTGAATGAATAGCCTTGA ATATAAAGACGAGAGTTGAA
Downstream 100 bases:
>100_bases ATTTTCACAGTGGTCTTCGCTATCGGCTTGGTCAATCATCAGCTTTACCCTACTAACAACACGGCAGTTATTGAGCAGTG GCTACGCCCTTATTCCAGTT
Product: membrane-flanked domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MDSSKNISNEADSINEQACHDLIAPSEWQGFDQVLLQPVDKRHYTQVLCESLIFGGIAFIAVSLAVFLPRELQLPLLLAV LTGLLLLLATVGYLRDRHAKSLAYATCEHELIMQKGFWWVKRTSLPYSRLQHVSLSHGPLERHFNLSTIKCFSAGSGSAE IELPGIEQDTAEHLRQHLLAQAAKANPQLPLEMASQQKELEDTPQTITPERSNDDS
Sequences:
>Translated_216_residues MDSSKNISNEADSINEQACHDLIAPSEWQGFDQVLLQPVDKRHYTQVLCESLIFGGIAFIAVSLAVFLPRELQLPLLLAV LTGLLLLLATVGYLRDRHAKSLAYATCEHELIMQKGFWWVKRTSLPYSRLQHVSLSHGPLERHFNLSTIKCFSAGSGSAE IELPGIEQDTAEHLRQHLLAQAAKANPQLPLEMASQQKELEDTPQTITPERSNDDS >Mature_216_residues MDSSKNISNEADSINEQACHDLIAPSEWQGFDQVLLQPVDKRHYTQVLCESLIFGGIAFIAVSLAVFLPRELQLPLLLAV LTGLLLLLATVGYLRDRHAKSLAYATCEHELIMQKGFWWVKRTSLPYSRLQHVSLSHGPLERHFNLSTIKCFSAGSGSAE IELPGIEQDTAEHLRQHLLAQAAKANPQLPLEMASQQKELEDTPQTITPERSNDDS
Specific function: Unknown
COG id: COG3402
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24081; Mature: 24081
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSSKNISNEADSINEQACHDLIAPSEWQGFDQVLLQPVDKRHYTQVLCESLIFGGIAFI CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVSLAVFLPRELQLPLLLAVLTGLLLLLATVGYLRDRHAKSLAYATCEHELIMQKGFWWV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE KRTSLPYSRLQHVSLSHGPLERHFNLSTIKCFSAGSGSAEIELPGIEQDTAEHLRQHLLA EECCCCHHHHHHCCCCCCCHHHCCCCHHEEEECCCCCCCEEEECCCCHHHHHHHHHHHHH QAAKANPQLPLEMASQQKELEDTPQTITPERSNDDS HHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDSSKNISNEADSINEQACHDLIAPSEWQGFDQVLLQPVDKRHYTQVLCESLIFGGIAFI CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVSLAVFLPRELQLPLLLAVLTGLLLLLATVGYLRDRHAKSLAYATCEHELIMQKGFWWV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE KRTSLPYSRLQHVSLSHGPLERHFNLSTIKCFSAGSGSAEIELPGIEQDTAEHLRQHLLA EECCCCHHHHHHCCCCCCCHHHCCCCHHEEEECCCCCCCEEEECCCCHHHHHHHHHHHHH QAAKANPQLPLEMASQQKELEDTPQTITPERSNDDS HHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA