| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is blaR1 [H]
Identifier: 157963026
GI number: 157963026
Start: 3934041
End: 3935234
Strand: Direct
Name: blaR1 [H]
Synonym: Spea_3209
Alternate gene names: 157963026
Gene position: 3934041-3935234 (Clockwise)
Preceding gene: 157963025
Following gene: 157963029
Centisome position: 76.03
GC content: 47.4
Gene sequence:
>1194_bases ATGATGCTATGGATGGCGCAGCAGACCCTTTTACTCTCATTAGTATGTGGCGGCTTACTCTTGAGTCACCGTTTATTGCA GCAACACCTTGGCGCCCACAGAACCTATCATTTGTGGCTAGCCATTCCCGCTCTGCTCATCAGCTCAGCCATAATGGTAA TGCTTCCCTCTCCTCTTAGTGCAGTGCAAGCCAACCAACTTGCTCACTACAGCGTGATGGCGGGCAAGGCAATCTCTGCC GTACAAACCACAGATTATGCGAACTTATTACTGCTTACATGGTTAGTTGGCGTAGGAATTATGTTCATCCTACTACTATT ACAAGCCATAGGGTTGAAACGGATATTGCGTACAGCAATCCCCCTTGAGCATCAAGATGCAGCGCTGCCAACACTGCAAC ACCCTAGTGTGCAGTCGCCCATGCTGGTCGGTATTAGCAATGCAAAAATCTTACTTCCAACTAGTTTTAATCGCTTGTCG GATGATGAGCGGCAGTCAATTATCGCTCATGAACAATACCACCATCAGCGCCGAGACCTAATCAGCAATCTACTCGCCTA CTTAACCCTAACGGTTTTCTGGTTCAATCCTCTATGCTGGCTGGCTTACCGACGCTTTAGAGACGATCAAGAGTTGTCTT GCGATGCCCATGTCACCCGAGCGTTAAGCAAGCAACAAAAAATCAGTTATAGCCAAGTGCTATTAGCCTACTCCCAGCAA GCTCATCACGGCCTGCTACACACTCACTATGGAAATAAAAACATACTCAAGGAGCGAATAATGCAAATGAAAACCTCTCA GAAAGGACAAAGTGGCTTAGCCATTATAGGCCTCACTATCTGCCTCGGACTAAGTGGCCTACTACTGAACCAACAGGTAC AGGCTGGTGCGCACGAGCATAATGAGGTTCATCCCTTAACCCGTGTTGAACCTAAATATCCAATTTCGGCAGTCGAGGCT CACCAGAGCGGCTTTGTGAAGCTTAAGTTTGATATCAGCCCTAGCGGCGCAGTAAGTAATGTCAGCGTGATTAAGTCATC GCCAGAAGCTGTATTTGATAAGTCAGCAGTTACCGCACTTGAGCAATGGCGCTATAAAGAGTCAACCAAGGGATTCAAAG GCGCAAAAGTGCAGCTCGATTTTATGATTGAGCCACCGGCAACCGATGTTGAGCGCATTAAAGTGACGCCTTAA
Upstream 100 bases:
>100_bases CGCCCTTGGTCGCAGGATTTGCTAAGCAGAATAAGCTCAGCGCGGAGGATGTCGACGAGCTACAACAGCTGATAGACACG TGGAAAAAGGATAACAAGTC
Downstream 100 bases:
>100_bases GCTAGAGTAAAAGATGAAAGCTAGTACTGATTGGTATTAGCTTTCATCTTTGTAGAGCTAGATTATTCGCGCTATTTATA AAAGCTATTTACCAGAGCTA
Product: TonB family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MMLWMAQQTLLLSLVCGGLLLSHRLLQQHLGAHRTYHLWLAIPALLISSAIMVMLPSPLSAVQANQLAHYSVMAGKAISA VQTTDYANLLLLTWLVGVGIMFILLLLQAIGLKRILRTAIPLEHQDAALPTLQHPSVQSPMLVGISNAKILLPTSFNRLS DDERQSIIAHEQYHHQRRDLISNLLAYLTLTVFWFNPLCWLAYRRFRDDQELSCDAHVTRALSKQQKISYSQVLLAYSQQ AHHGLLHTHYGNKNILKERIMQMKTSQKGQSGLAIIGLTICLGLSGLLLNQQVQAGAHEHNEVHPLTRVEPKYPISAVEA HQSGFVKLKFDISPSGAVSNVSVIKSSPEAVFDKSAVTALEQWRYKESTKGFKGAKVQLDFMIEPPATDVERIKVTP
Sequences:
>Translated_397_residues MMLWMAQQTLLLSLVCGGLLLSHRLLQQHLGAHRTYHLWLAIPALLISSAIMVMLPSPLSAVQANQLAHYSVMAGKAISA VQTTDYANLLLLTWLVGVGIMFILLLLQAIGLKRILRTAIPLEHQDAALPTLQHPSVQSPMLVGISNAKILLPTSFNRLS DDERQSIIAHEQYHHQRRDLISNLLAYLTLTVFWFNPLCWLAYRRFRDDQELSCDAHVTRALSKQQKISYSQVLLAYSQQ AHHGLLHTHYGNKNILKERIMQMKTSQKGQSGLAIIGLTICLGLSGLLLNQQVQAGAHEHNEVHPLTRVEPKYPISAVEA HQSGFVKLKFDISPSGAVSNVSVIKSSPEAVFDKSAVTALEQWRYKESTKGFKGAKVQLDFMIEPPATDVERIKVTP >Mature_397_residues MMLWMAQQTLLLSLVCGGLLLSHRLLQQHLGAHRTYHLWLAIPALLISSAIMVMLPSPLSAVQANQLAHYSVMAGKAISA VQTTDYANLLLLTWLVGVGIMFILLLLQAIGLKRILRTAIPLEHQDAALPTLQHPSVQSPMLVGISNAKILLPTSFNRLS DDERQSIIAHEQYHHQRRDLISNLLAYLTLTVFWFNPLCWLAYRRFRDDQELSCDAHVTRALSKQQKISYSQVLLAYSQQ AHHGLLHTHYGNKNILKERIMQMKTSQKGQSGLAIIGLTICLGLSGLLLNQQVQAGAHEHNEVHPLTRVEPKYPISAVEA HQSGFVKLKFDISPSGAVSNVSVIKSSPEAVFDKSAVTALEQWRYKESTKGFKGAKVQLDFMIEPPATDVERIKVTP
Specific function: BlaR1 is a potential penicillin-binding protein required for induction of beta-lactamase in Bacillus licheniformis [H]
COG id: COG4219
COG function: function code KT; Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M56 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001460 - InterPro: IPR008756 [H]
Pfam domain/function: PF05569 Peptidase_M56; PF00905 Transpeptidase [H]
EC number: NA
Molecular weight: Translated: 44242; Mature: 44242
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLWMAQQTLLLSLVCGGLLLSHRLLQQHLGAHRTYHLWLAIPALLISSAIMVMLPSPLS CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCHH AVQANQLAHYSVMAGKAISAVQTTDYANLLLLTWLVGVGIMFILLLLQAIGLKRILRTAI HHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PLEHQDAALPTLQHPSVQSPMLVGISNAKILLPTSFNRLSDDERQSIIAHEQYHHQRRDL CCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH ISNLLAYLTLTVFWFNPLCWLAYRRFRDDQELSCDAHVTRALSKQQKISYSQVLLAYSQQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AHHGLLHTHYGNKNILKERIMQMKTSQKGQSGLAIIGLTICLGLSGLLLNQQVQAGAHEH HHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC NEVHPLTRVEPKYPISAVEAHQSGFVKLKFDISPSGAVSNVSVIKSSPEAVFDKSAVTAL CCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHH EQWRYKESTKGFKGAKVQLDFMIEPPATDVERIKVTP HHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEECC >Mature Secondary Structure MMLWMAQQTLLLSLVCGGLLLSHRLLQQHLGAHRTYHLWLAIPALLISSAIMVMLPSPLS CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCHH AVQANQLAHYSVMAGKAISAVQTTDYANLLLLTWLVGVGIMFILLLLQAIGLKRILRTAI HHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PLEHQDAALPTLQHPSVQSPMLVGISNAKILLPTSFNRLSDDERQSIIAHEQYHHQRRDL CCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH ISNLLAYLTLTVFWFNPLCWLAYRRFRDDQELSCDAHVTRALSKQQKISYSQVLLAYSQQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AHHGLLHTHYGNKNILKERIMQMKTSQKGQSGLAIIGLTICLGLSGLLLNQQVQAGAHEH HHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC NEVHPLTRVEPKYPISAVEAHQSGFVKLKFDISPSGAVSNVSVIKSSPEAVFDKSAVTAL CCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHH EQWRYKESTKGFKGAKVQLDFMIEPPATDVERIKVTP HHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3040663; 3260234; 2404938 [H]