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The map label for this gene is yfiO [C]

Identifier: 157962984

GI number: 157962984

Start: 3878809

End: 3879615

Strand: Direct

Name: yfiO [C]

Synonym: Spea_3167

Alternate gene names: 157962984

Gene position: 3878809-3879615 (Clockwise)

Preceding gene: 157962979

Following gene: 157962987

Centisome position: 74.96

GC content: 40.52

Gene sequence:

>807_bases
ATGGAAAAATTCTTAACAATAACTTTAAAAGAATCGAATTCAAGTATGCATAAAATTGCCAAAAGTGTCGCTGTAGTCCT
TATCACACTTGCAGCTACGGCCTGTAGTAGTAAACAGGGCGAAGACCCTGCGATGACAAAGAGCTCTCCAGAAGTGCTCT
ATTCTCAAGCAAGAACCTCTATGGAACTAGGTAATTACAGCAAAGCTGTCCGCTCTCTAGAAGCCTTGGATTCACGCTTC
CCATTTGGTCCACATAAGACTCAAGTTCAACTTGATCTTATTTATGCCTATTACAAACTTGACGATCCTGCGTCAGGTAT
TGCGAATATCGATCGTTTTATTCGCTTAAACCCAACTCATAAAGATATTGATTATGTTTATTACATGCGCGGCTTAGTCA
ATATGCAGTCTGACCGATACCTGTTTCACGATATGCTAAATATCGATCGTTCTGACCGCGATCCAAAGGCTGCGCAAGAT
GCATTCAACGATTTCGATAGACTAATTAAGTCATATCCAAACAGTAAGTATGCAGCAGATGCACAAAAACGCATGCAGCA
CCTAAAAAATAGACTGGCACTTTACTCGATCAAGGTAGCCGAATACTACATAAAAATGAATGCATGGAGTGCTGCCGCGA
TCCGCGCGCAGTCAGTTTTAGAGACCTATCCAGGTACACCATCAACTGAAAAAGCATTAGAGATCATGTCTACGGCCTAT
GGTGAACTAGGCCAAGAAAAGCTTAAAGATCATGTACTCATGGTAATGAAGGCTAACTATCCTAATAATAAATTAGTGAC
TAAATAA

Upstream 100 bases:

>100_bases
TTTAGATTAATCTCTTGTGTCATATGAACCGTACCCACTTTTCAGGGTCCAAAAATGTTTACTATCTGTTACAATCGGAT
TGTTTCTATTTTATCGTGAA

Downstream 100 bases:

>100_bases
CCTAAACATTAAGCATGTTTTACAATAAATAAAGGCCTCTTTTTGAGGCCTTTATTTTTTTATTCAATTTTCGACGGATC
TTGTTACCGCGCGCAGTCGT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MEKFLTITLKESNSSMHKIAKSVAVVLITLAATACSSKQGEDPAMTKSSPEVLYSQARTSMELGNYSKAVRSLEALDSRF
PFGPHKTQVQLDLIYAYYKLDDPASGIANIDRFIRLNPTHKDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQD
AFNDFDRLIKSYPNSKYAADAQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAIRAQSVLETYPGTPSTEKALEIMSTAY
GELGQEKLKDHVLMVMKANYPNNKLVTK

Sequences:

>Translated_268_residues
MEKFLTITLKESNSSMHKIAKSVAVVLITLAATACSSKQGEDPAMTKSSPEVLYSQARTSMELGNYSKAVRSLEALDSRF
PFGPHKTQVQLDLIYAYYKLDDPASGIANIDRFIRLNPTHKDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQD
AFNDFDRLIKSYPNSKYAADAQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAIRAQSVLETYPGTPSTEKALEIMSTAY
GELGQEKLKDHVLMVMKANYPNNKLVTK
>Mature_268_residues
MEKFLTITLKESNSSMHKIAKSVAVVLITLAATACSSKQGEDPAMTKSSPEVLYSQARTSMELGNYSKAVRSLEALDSRF
PFGPHKTQVQLDLIYAYYKLDDPASGIANIDRFIRLNPTHKDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQD
AFNDFDRLIKSYPNSKYAADAQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAIRAQSVLETYPGTPSTEKALEIMSTAY
GELGQEKLKDHVLMVMKANYPNNKLVTK

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=247, Percent_Identity=45.3441295546559, Blast_Score=221, Evalue=3e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30407; Mature: 30407

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKFLTITLKESNSSMHKIAKSVAVVLITLAATACSSKQGEDPAMTKSSPEVLYSQARTS
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
MELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRFIRLNPTH
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHEEECCCC
KDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFNDFDRLIKSYPNSKYAAD
CHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
AQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAIRAQSVLETYPGTPSTEKALEIMSTAY
HHHHHHHHHHHHHHHEEHHHHEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GELGQEKLKDHVLMVMKANYPNNKLVTK
HHHHHHHHHHHEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MEKFLTITLKESNSSMHKIAKSVAVVLITLAATACSSKQGEDPAMTKSSPEVLYSQARTS
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
MELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRFIRLNPTH
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHEEECCCC
KDIDYVYYMRGLVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFNDFDRLIKSYPNSKYAAD
CHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
AQKRMQHLKNRLALYSIKVAEYYIKMNAWSAAAIRAQSVLETYPGTPSTEKALEIMSTAY
HHHHHHHHHHHHHHHEEHHHHEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GELGQEKLKDHVLMVMKANYPNNKLVTK
HHHHHHHHHHHEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]