| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962979
Identifier: 157962979
GI number: 157962979
Start: 3872842
End: 3873405
Strand: Direct
Name: 157962979
Synonym: Spea_3162
Alternate gene names: NA
Gene position: 3872842-3873405 (Clockwise)
Preceding gene: 157962978
Following gene: 157962984
Centisome position: 74.84
GC content: 43.09
Gene sequence:
>564_bases ATGATACTGATGGGTTCTAGGCGTCATCGGCGTCAATTCATTTTAACCATGGATAGAAAAATGATTAAAACAATAAAAAT AGGCTGCGTTAAACTTCAGCTTCCCACCTACAGCGCTGCGTTGGTTAGCACGTTTCTGCTATTGGGCTTATCTGCTTCAT CATCCCAAGCCAACATTATCTACACTTGGGTCGATGCCAATGGCGTCACTCACTATAGTCAGCAGCCTCCGGAAGATGAT CAAACGCCTACTCATACAGATAAGCTATATAGTGACGATCTTAAACCTAAGCAAATAGGTACTGTCGCTCCTTCACCTCC CATTGTTAAAAATCAAGCTCAAACCGATTTAGAGAAAACGGCAGCAGCGATAAATCAGGCGGATTCTGCTCAAGCAAAGC AGATCTGTGAAAATGCTCGTCACAGCCTTAACGTACTGACTACTCATGCAAAGCTAAATAAGAAAAATAAACAGACTGGT GAAGTCGTCGCGATGACCGAAGAACAAAGGCAGGCTTCGATCTCGGAACAGAAAGAGAGAATTAAGCTATTTTGCACGGA TTAG
Upstream 100 bases:
>100_bases AAAGCTCGGTTTTTCCCTAAAAACTTTCATCCGCTTCTATATAGCGCTACTTATTGTATAGTCTATCGTCATATTGGCAT TCTAAAGTATTCAGGCTAGC
Downstream 100 bases:
>100_bases TCTTTAGCAAAAAATGATACTAAAGCTATATCCCTTTAAATATTAAAAAACAGACTCTACGGAGTCTGTTTCATCAGCAA GAGACGCAGTTACTTGGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MILMGSRRHRRQFILTMDRKMIKTIKIGCVKLQLPTYSAALVSTFLLLGLSASSSQANIIYTWVDANGVTHYSQQPPEDD QTPTHTDKLYSDDLKPKQIGTVAPSPPIVKNQAQTDLEKTAAAINQADSAQAKQICENARHSLNVLTTHAKLNKKNKQTG EVVAMTEEQRQASISEQKERIKLFCTD
Sequences:
>Translated_187_residues MILMGSRRHRRQFILTMDRKMIKTIKIGCVKLQLPTYSAALVSTFLLLGLSASSSQANIIYTWVDANGVTHYSQQPPEDD QTPTHTDKLYSDDLKPKQIGTVAPSPPIVKNQAQTDLEKTAAAINQADSAQAKQICENARHSLNVLTTHAKLNKKNKQTG EVVAMTEEQRQASISEQKERIKLFCTD >Mature_187_residues MILMGSRRHRRQFILTMDRKMIKTIKIGCVKLQLPTYSAALVSTFLLLGLSASSSQANIIYTWVDANGVTHYSQQPPEDD QTPTHTDKLYSDDLKPKQIGTVAPSPPIVKNQAQTDLEKTAAAINQADSAQAKQICENARHSLNVLTTHAKLNKKNKQTG EVVAMTEEQRQASISEQKERIKLFCTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20836; Mature: 20836
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILMGSRRHRRQFILTMDRKMIKTIKIGCVKLQLPTYSAALVSTFLLLGLSASSSQANII CEECCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEE YTWVDANGVTHYSQQPPEDDQTPTHTDKLYSDDLKPKQIGTVAPSPPIVKNQAQTDLEKT EEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AAAINQADSAQAKQICENARHSLNVLTTHAKLNKKNKQTGEVVAMTEEQRQASISEQKER HHHHCCCCHHHHHHHHHHHHHHHHEEEEHHHHCCCCCCCCCEEEECHHHHHHHHHHHHCE IKLFCTD EEEEECC >Mature Secondary Structure MILMGSRRHRRQFILTMDRKMIKTIKIGCVKLQLPTYSAALVSTFLLLGLSASSSQANII CEECCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEE YTWVDANGVTHYSQQPPEDDQTPTHTDKLYSDDLKPKQIGTVAPSPPIVKNQAQTDLEKT EEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AAAINQADSAQAKQICENARHSLNVLTTHAKLNKKNKQTGEVVAMTEEQRQASISEQKER HHHHCCCCHHHHHHHHHHHHHHHHEEEEHHHHCCCCCCCCCEEEECHHHHHHHHHHHHCE IKLFCTD EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA