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The map label for this gene is ybeB [H]

Identifier: 157962964

GI number: 157962964

Start: 3852723

End: 3853052

Strand: Direct

Name: ybeB [H]

Synonym: Spea_3147

Alternate gene names: 157962964

Gene position: 3852723-3853052 (Clockwise)

Preceding gene: 157962963

Following gene: 157962965

Centisome position: 74.45

GC content: 41.82

Gene sequence:

>330_bases
GTGGAAAGCGCAGAGTTAAAGCAATTTGTAATCGATAAGGTTGAAGACCTTAAAGCAAAAGATATCGTTGTAATGGACGT
ATCAGAGAAATCTAACATCGCCGACTTTATGGTTGTATGTACGGGTAACTCAAAAACACACGTTAAAGCAATCGCTGAAA
ATCTAGTGGTTGAATCTAAGCGTGCAGGTCTGACAATTCTAGGTGTCGAAGGCCGCGAAAGCAGTGAATGGGTTCTTGTG
GACCTAGGCGATGTCATCATGCATGTTATGCAAGATCAAACTCGCGATTTCTACCAGCTTGAAAAACTTTGGTCAGAAAA
GCCTGAGTAA

Upstream 100 bases:

>100_bases
AAAGCCTAATCAAACCCAGATATTTATGCCAATAGCTATTAATCTGGATTTGAAATACTGCTATACTATCGCGCTGTCTT
AAAATTAATGGGGTACCAGC

Downstream 100 bases:

>100_bases
TGAAGATTCAGTTAGTCGCAGTTGGAACCCGCATGCCAGATTGGGTTGAAACAGGTTTCAAAGAATATCAGCGCCGCTTT
CCTCGAGATATGGCGCTTGA

Product: iojap-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MESAELKQFVIDKVEDLKAKDIVVMDVSEKSNIADFMVVCTGNSKTHVKAIAENLVVESKRAGLTILGVEGRESSEWVLV
DLGDVIMHVMQDQTRDFYQLEKLWSEKPE

Sequences:

>Translated_109_residues
MESAELKQFVIDKVEDLKAKDIVVMDVSEKSNIADFMVVCTGNSKTHVKAIAENLVVESKRAGLTILGVEGRESSEWVLV
DLGDVIMHVMQDQTRDFYQLEKLWSEKPE
>Mature_109_residues
MESAELKQFVIDKVEDLKAKDIVVMDVSEKSNIADFMVVCTGNSKTHVKAIAENLVVESKRAGLTILGVEGRESSEWVLV
DLGDVIMHVMQDQTRDFYQLEKLWSEKPE

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=92, Percent_Identity=33.695652173913, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI87081768, Length=105, Percent_Identity=56.1904761904762, Blast_Score=131, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 12313; Mature: 12313

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESAELKQFVIDKVEDLKAKDIVVMDVSEKSNIADFMVVCTGNSKTHVKAIAENLVVESK
CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCC
RAGLTILGVEGRESSEWVLVDLGDVIMHVMQDQTRDFYQLEKLWSEKPE
CCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MESAELKQFVIDKVEDLKAKDIVVMDVSEKSNIADFMVVCTGNSKTHVKAIAENLVVESK
CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCC
RAGLTILGVEGRESSEWVLVDLGDVIMHVMQDQTRDFYQLEKLWSEKPE
CCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]