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The map label for this gene is nmpC [C]

Identifier: 157962475

GI number: 157962475

Start: 3233401

End: 3234612

Strand: Reverse

Name: nmpC [C]

Synonym: Spea_2654

Alternate gene names: 157962475

Gene position: 3234612-3233401 (Counterclockwise)

Preceding gene: 157962476

Following gene: 157962474

Centisome position: 62.51

GC content: 42.24

Gene sequence:

>1212_bases
ATGAAAAAGACTCTAGTAGCATCGGCTTTAGCCGCAGTGATATTTGTACCAACAGCATCAGCAATTGAAATTTATAAAGA
TGATAAAAATGCAGTAGAAATTGGTGGTTATGTTGATGCTCGCATCATCAATACTCAAGGTGCTACAGAAGTGGTTAACG
GCGCTTCACGTATTAATTTCGGTTTTACTCGCCAGATGAGCGACGGCTGGAAAGCTTATACTAAGCTAGAGTGGGGCGTA
AACCCATTCGGTAATACCGACATCGTTTACAACAGCGACAGTACATTAGAATCTCAAAGCGGTGACTTCTTAAATAACCG
TTTAGGCTATGTAGGTCTTGCACACGACACATATGGTTCAATCACTATTGGTAAGCAATGGGGCGCATGGTATGACGTAG
TTTATAACACTAACTATGGCTTCGTATGGGATGGTAACGCATCAGGTACTTACACTTACAATAAGGCTGATGGTGCTGTA
AACGGTACTGGCCGTGGTGACAAAACGGTTCAATACCGTAATGTATTCGGTGATTTCAGCTTCGCAGTTCAGGCTCAGCT
TAAGCAAGATAGTTTTGATATAAACGAAACTGCCACGGGTGCAAGCACTTTGTTCCCATCAACAGCTAAAGTTGCTGGTG
TTAATAATTCAAATGCAGTAACAACAGTTGAATATAACAACACTTATGGCGGTTCTGCTACGTACAACGTAACTGAAAAC
TTAGTGGTAACTGCAGGTTTTAACTTTGGCGAGTTCGAAGCCACTACTTCTGCTGGTAAGCGTCTAACTGAAACTGACTC
TATCTACGGTCTAGGTGCTAGCTGGGGTAACTGGGGCGGTGAAGGTGTTTACGCTGCATTCAACGTTAACAAGCAAGAGT
TCCACGATACTGATAACCTAAACCGTATGATCCAAGATGCATGGGGTCTAGAATCAATTGCTTCTTACAAGTTCGATAAC
GGTATCCGTACTTTCGTTTCTTATAACATCCTAGAAGCAGGCGACGAATACGAAGCAGCTTACAATGGTGATGTATTCAA
GCGTCAGTTTGCAGTTGCTGGTGTTCACTATGTTTGGGACTCAAACACTGTTCTTTATCTAGAAGGTCGTAAAGATTTTA
GTGATTTCACTAGCGCAGATAAAGTACAGCAAGCTGCGATGGAAGTTTCTGAAGATGACGGTATCGCAATTGGTATCCGT
TACACACTTTAA

Upstream 100 bases:

>100_bases
CTTTTGTTAATCTCAAATTCTATCAGGAAAGAAAGAAAACAACGGAATGGAAGACAAATAGAATGAAGCAGACTGAACAA
CATTAAGGTTAGGCAAATAA

Downstream 100 bases:

>100_bases
TTTGTCTAATTTAAAGTGATTAAAGCGCCTATTAAGGCGCTTTTTTTTGGCTTTAACTCTCACGGCTTCTTTCATCTGGT
GATAACTGATTGGGAGAATG

Product: porin

Products: NA

Alternate protein names: Porin Gram-Negative Type; Outer Membrane Protein; Outer Membrane Protein N; Tetrachloroethylene Dehalogenase; Outer Membrane Pore Protein

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MKKTLVASALAAVIFVPTASAIEIYKDDKNAVEIGGYVDARIINTQGATEVVNGASRINFGFTRQMSDGWKAYTKLEWGV
NPFGNTDIVYNSDSTLESQSGDFLNNRLGYVGLAHDTYGSITIGKQWGAWYDVVYNTNYGFVWDGNASGTYTYNKADGAV
NGTGRGDKTVQYRNVFGDFSFAVQAQLKQDSFDINETATGASTLFPSTAKVAGVNNSNAVTTVEYNNTYGGSATYNVTEN
LVVTAGFNFGEFEATTSAGKRLTETDSIYGLGASWGNWGGEGVYAAFNVNKQEFHDTDNLNRMIQDAWGLESIASYKFDN
GIRTFVSYNILEAGDEYEAAYNGDVFKRQFAVAGVHYVWDSNTVLYLEGRKDFSDFTSADKVQQAAMEVSEDDGIAIGIR
YTL

Sequences:

>Translated_403_residues
MKKTLVASALAAVIFVPTASAIEIYKDDKNAVEIGGYVDARIINTQGATEVVNGASRINFGFTRQMSDGWKAYTKLEWGV
NPFGNTDIVYNSDSTLESQSGDFLNNRLGYVGLAHDTYGSITIGKQWGAWYDVVYNTNYGFVWDGNASGTYTYNKADGAV
NGTGRGDKTVQYRNVFGDFSFAVQAQLKQDSFDINETATGASTLFPSTAKVAGVNNSNAVTTVEYNNTYGGSATYNVTEN
LVVTAGFNFGEFEATTSAGKRLTETDSIYGLGASWGNWGGEGVYAAFNVNKQEFHDTDNLNRMIQDAWGLESIASYKFDN
GIRTFVSYNILEAGDEYEAAYNGDVFKRQFAVAGVHYVWDSNTVLYLEGRKDFSDFTSADKVQQAAMEVSEDDGIAIGIR
YTL
>Mature_403_residues
MKKTLVASALAAVIFVPTASAIEIYKDDKNAVEIGGYVDARIINTQGATEVVNGASRINFGFTRQMSDGWKAYTKLEWGV
NPFGNTDIVYNSDSTLESQSGDFLNNRLGYVGLAHDTYGSITIGKQWGAWYDVVYNTNYGFVWDGNASGTYTYNKADGAV
NGTGRGDKTVQYRNVFGDFSFAVQAQLKQDSFDINETATGASTLFPSTAKVAGVNNSNAVTTVEYNNTYGGSATYNVTEN
LVVTAGFNFGEFEATTSAGKRLTETDSIYGLGASWGNWGGEGVYAAFNVNKQEFHDTDNLNRMIQDAWGLESIASYKFDN
GIRTFVSYNILEAGDEYEAAYNGDVFKRQFAVAGVHYVWDSNTVLYLEGRKDFSDFTSADKVQQAAMEVSEDDGIAIGIR
YTL

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43991; Mature: 43991

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLVASALAAVIFVPTASAIEIYKDDKNAVEIGGYVDARIINTQGATEVVNGASRINF
CCCHHHHHHHHHEEEECCCCEEEEEECCCCEEEECCEEEEEEEECCCCHHHHCCCHHCCC
GFTRQMSDGWKAYTKLEWGVNPFGNTDIVYNSDSTLESQSGDFLNNRLGYVGLAHDTYGS
CEEECCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCEEEEEECCCCC
ITIGKQWGAWYDVVYNTNYGFVWDGNASGTYTYNKADGAVNGTGRGDKTVQYRNVFGDFS
EEECCCCCCEEEEEEECCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCE
FAVQAQLKQDSFDINETATGASTLFPSTAKVAGVNNSNAVTTVEYNNTYGGSATYNVTEN
EEEEEEECCCCCCCCCCCCCCHHCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEEECC
LVVTAGFNFGEFEATTSAGKRLTETDSIYGLGASWGNWGGEGVYAAFNVNKQEFHDTDNL
EEEEECCCCCCEEECHHCCCEECCCCCEEEECCCCCCCCCCCEEEEEECCHHHHCCCHHH
NRMIQDAWGLESIASYKFDNGIRTFVSYNILEAGDEYEAAYNGDVFKRQFAVAGVHYVWD
HHHHHHHCCHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHEEHEEEEEEEEEC
SNTVLYLEGRKDFSDFTSADKVQQAAMEVSEDDGIAIGIRYTL
CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKKTLVASALAAVIFVPTASAIEIYKDDKNAVEIGGYVDARIINTQGATEVVNGASRINF
CCCHHHHHHHHHEEEECCCCEEEEEECCCCEEEECCEEEEEEEECCCCHHHHCCCHHCCC
GFTRQMSDGWKAYTKLEWGVNPFGNTDIVYNSDSTLESQSGDFLNNRLGYVGLAHDTYGS
CEEECCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCEEEEEECCCCC
ITIGKQWGAWYDVVYNTNYGFVWDGNASGTYTYNKADGAVNGTGRGDKTVQYRNVFGDFS
EEECCCCCCEEEEEEECCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCE
FAVQAQLKQDSFDINETATGASTLFPSTAKVAGVNNSNAVTTVEYNNTYGGSATYNVTEN
EEEEEEECCCCCCCCCCCCCCHHCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEEECC
LVVTAGFNFGEFEATTSAGKRLTETDSIYGLGASWGNWGGEGVYAAFNVNKQEFHDTDNL
EEEEECCCCCCEEECHHCCCEECCCCCEEEECCCCCCCCCCCEEEEEECCHHHHCCCHHH
NRMIQDAWGLESIASYKFDNGIRTFVSYNILEAGDEYEAAYNGDVFKRQFAVAGVHYVWD
HHHHHHHCCHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHEEHEEEEEEEEEC
SNTVLYLEGRKDFSDFTSADKVQQAAMEVSEDDGIAIGIRYTL
CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA