Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is ygjP [H]
Identifier: 157962447
GI number: 157962447
Start: 3196592
End: 3197098
Strand: Direct
Name: ygjP [H]
Synonym: Spea_2626
Alternate gene names: 157962447
Gene position: 3196592-3197098 (Clockwise)
Preceding gene: 157962446
Following gene: 157962448
Centisome position: 61.77
GC content: 42.21
Gene sequence:
>507_bases ATGCAACCACTCAAATACCTCGCTGGGTACTCAAGCGATATCCAAGAGCAAATTCAAAGCCTGTTAGCTCACGACAAGCT CGGGCAGTTCCTGCTTAAGCGTCACCCACAGATCCACTCAGTTCGCACAGACAAAGCGCTGTTCGACTACACCATGGAGA TTAAGAATCAATATTTACGTAAGTCTCAGCCATTATCAAAAGTAATATTTGATGACAAGATATCCCTCAGTCATCAAGCC CTAGGTTTACATTCTTATGTAGCCCGTAAGCAAGGTGCAAAGATTAAAGCAAAAAATGAAATCCGCATCTCATCACGGCT TAAAAAGGTGCCCGAAGGGTTATTGAGAATGGTGGTGGTGCATGAGCTCGCCCATTTAAAAGAGAAAGATCATAACAAAG CTTTTTATCAGCTCTGCTGCCATATGGACGGTGACTACCATCAGCTAGAGTTTGAGTTAAGACTATTGCTAACCTTAATT GATGCAGGTAAAAACCCTTATACTTAA
Upstream 100 bases:
>100_bases GACGAAGCGTAAGCTTATAAACTAGCACTGTAGATACTAATGGGCGCACTAACAGCGCCCTTTTTTTATCTAAAAACCAA TACCTTAAAACAAGCACAGT
Downstream 100 bases:
>100_bases TGTGATTAGCCAAAACAGATCTTGGCTAATCACTTCACTCCCCTAAGATACACCTTCTTTAGCTGATTCTGGCAGCTCAC GTGCAATGAAGTCATCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MQPLKYLAGYSSDIQEQIQSLLAHDKLGQFLLKRHPQIHSVRTDKALFDYTMEIKNQYLRKSQPLSKVIFDDKISLSHQA LGLHSYVARKQGAKIKAKNEIRISSRLKKVPEGLLRMVVVHELAHLKEKDHNKAFYQLCCHMDGDYHQLEFELRLLLTLI DAGKNPYT
Sequences:
>Translated_168_residues MQPLKYLAGYSSDIQEQIQSLLAHDKLGQFLLKRHPQIHSVRTDKALFDYTMEIKNQYLRKSQPLSKVIFDDKISLSHQA LGLHSYVARKQGAKIKAKNEIRISSRLKKVPEGLLRMVVVHELAHLKEKDHNKAFYQLCCHMDGDYHQLEFELRLLLTLI DAGKNPYT >Mature_168_residues MQPLKYLAGYSSDIQEQIQSLLAHDKLGQFLLKRHPQIHSVRTDKALFDYTMEIKNQYLRKSQPLSKVIFDDKISLSHQA LGLHSYVARKQGAKIKAKNEIRISSRLKKVPEGLLRMVVVHELAHLKEKDHNKAFYQLCCHMDGDYHQLEFELRLLLTLI DAGKNPYT
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082207, Length=165, Percent_Identity=53.9393939393939, Blast_Score=195, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002725 [H]
Pfam domain/function: PF01863 DUF45 [H]
EC number: NA
Molecular weight: Translated: 19509; Mature: 19509
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPLKYLAGYSSDIQEQIQSLLAHDKLGQFLLKRHPQIHSVRTDKALFDYTMEIKNQYLR CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH KSQPLSKVIFDDKISLSHQALGLHSYVARKQGAKIKAKNEIRISSRLKKVPEGLLRMVVV HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH HELAHLKEKDHNKAFYQLCCHMDGDYHQLEFELRLLLTLIDAGKNPYT HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQPLKYLAGYSSDIQEQIQSLLAHDKLGQFLLKRHPQIHSVRTDKALFDYTMEIKNQYLR CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH KSQPLSKVIFDDKISLSHQALGLHSYVARKQGAKIKAKNEIRISSRLKKVPEGLLRMVVV HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH HELAHLKEKDHNKAFYQLCCHMDGDYHQLEFELRLLLTLIDAGKNPYT HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]