Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962446
Identifier: 157962446
GI number: 157962446
Start: 3196060
End: 3196503
Strand: Direct
Name: 157962446
Synonym: Spea_2625
Alternate gene names: NA
Gene position: 3196060-3196503 (Clockwise)
Preceding gene: 157962445
Following gene: 157962447
Centisome position: 61.76
GC content: 40.77
Gene sequence:
>444_bases ATGAGAATTTGTGGCGTAGAGTTAAAAGGTGGCGAAGCCATCATCAGTTTATTGAGTAGTGAAGGCGAAACTTATAACGT GCCGGATTGCCGTCAAAAGTCATTCGTGATCTCAAACTCAGAAAACGCCGAAACAATGCGTGATTTTCACTTTGCTTTTG GCAAGTTGATTGAAGACTACAGAATCGACGAAATCGTGATTATTGAACGTGAACAGAAAGGCAAAGGCGCTGGTAGCGTA ACTAGCTTTAAATTAGAAGCGTTGATTCAAATCATACCTGTAAATGTATCTTTGGTATCGCCAGTGGCTATCAAAGAGCA ATTGAAGCGTAACCCTCCTCAAGTTGATTTTGAAGGTCTTGAGCTTAAACGTTTCCAAAAGAATGCATTTGAAGCCGCTT ATGCCTTCCATAACATGACTATCTACAAGACTGACGAAGCGTAA
Upstream 100 bases:
>100_bases ACAAAAGTTATTTGAATAACACTATAAAGCTCATTAAAACGCTGACCGTTTCGAGAAATAGCGCTACAATATCGGCAATA TTGTTTTTTTAAGGTTTATC
Downstream 100 bases:
>100_bases GCTTATAAACTAGCACTGTAGATACTAATGGGCGCACTAACAGCGCCCTTTTTTTATCTAAAAACCAATACCTTAAAACA AGCACAGTATGCAACCACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MRICGVELKGGEAIISLLSSEGETYNVPDCRQKSFVISNSENAETMRDFHFAFGKLIEDYRIDEIVIIEREQKGKGAGSV TSFKLEALIQIIPVNVSLVSPVAIKEQLKRNPPQVDFEGLELKRFQKNAFEAAYAFHNMTIYKTDEA
Sequences:
>Translated_147_residues MRICGVELKGGEAIISLLSSEGETYNVPDCRQKSFVISNSENAETMRDFHFAFGKLIEDYRIDEIVIIEREQKGKGAGSV TSFKLEALIQIIPVNVSLVSPVAIKEQLKRNPPQVDFEGLELKRFQKNAFEAAYAFHNMTIYKTDEA >Mature_147_residues MRICGVELKGGEAIISLLSSEGETYNVPDCRQKSFVISNSENAETMRDFHFAFGKLIEDYRIDEIVIIEREQKGKGAGSV TSFKLEALIQIIPVNVSLVSPVAIKEQLKRNPPQVDFEGLELKRFQKNAFEAAYAFHNMTIYKTDEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16561; Mature: 16561
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRICGVELKGGEAIISLLSSEGETYNVPDCRQKSFVISNSENAETMRDFHFAFGKLIEDY CEEEEEEECCCHHHHHHHHCCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHC RIDEIVIIEREQKGKGAGSVTSFKLEALIQIIPVNVSLVSPVAIKEQLKRNPPQVDFEGL CCCEEEEEEECCCCCCCCCCHHHHHHEEEEEECCCEEEECHHHHHHHHHCCCCCCCCCCC ELKRFQKNAFEAAYAFHNMTIYKTDEA HHHHHHHHHHHHHHHHHCEEEEEECCC >Mature Secondary Structure MRICGVELKGGEAIISLLSSEGETYNVPDCRQKSFVISNSENAETMRDFHFAFGKLIEDY CEEEEEEECCCHHHHHHHHCCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHC RIDEIVIIEREQKGKGAGSVTSFKLEALIQIIPVNVSLVSPVAIKEQLKRNPPQVDFEGL CCCEEEEEEECCCCCCCCCCHHHHHHEEEEEECCCEEEECHHHHHHHHHCCCCCCCCCCC ELKRFQKNAFEAAYAFHNMTIYKTDEA HHHHHHHHHHHHHHHHHCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA