Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962448
Identifier: 157962448
GI number: 157962448
Start: 3197346
End: 3197744
Strand: Direct
Name: 157962448
Synonym: Spea_2627
Alternate gene names: NA
Gene position: 3197346-3197744 (Clockwise)
Preceding gene: 157962447
Following gene: 157962451
Centisome position: 61.79
GC content: 45.86
Gene sequence:
>399_bases ATGAGCGAAGAGTTAACTAACAAGCAGCAGAAGTGTCGCCGTAAGTTGGCTAAATACCAGCAAAAGATCAGCCATTATTC GCAGCTAAAAGACAGCGAAATCTCTTTGAAGAAGCGTGCGGCTAAGCTGTGTAAATATCGATTAAAAATCATCAAGCGCC AACTCAAGCTTAAGCGTATCGATGCACAAATTGTCCAGTTTGCCGCTTACACTAAACTGATACCCGCCAACGATAGTGCC GCCAATGCATCCATACTAACGCAGCACAGTGTCAATTCTTCCCCCGCTCAAGCTGACTTGTATCGCCCCCATAAGGCTAA GCCCTGTAAAAGCTGCCCTGCCCTTCGTGGAAAAGCTTGTTTATGTGCAATGAAAAACGAGCAGCGTAAACAAGCATAG
Upstream 100 bases:
>100_bases GATAATGATTTTCATTTAGCCGAGTTTGGATTACACTCTAAGCCATTGAGGATATAGGCACTAGCTGATCTTTTGGGTAA TCGATGAAGAGTGAATACTT
Downstream 100 bases:
>100_bases ATTCAGCCTTTGAATGAAGGCTGGTTACATTCTTTTTAACTGAGACACCCAAAATTATTCACTGCACTGGCAGCTTGAAC TCGACATTGAGGTTGGTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSEELTNKQQKCRRKLAKYQQKISHYSQLKDSEISLKKRAAKLCKYRLKIIKRQLKLKRIDAQIVQFAAYTKLIPANDSA ANASILTQHSVNSSPAQADLYRPHKAKPCKSCPALRGKACLCAMKNEQRKQA
Sequences:
>Translated_132_residues MSEELTNKQQKCRRKLAKYQQKISHYSQLKDSEISLKKRAAKLCKYRLKIIKRQLKLKRIDAQIVQFAAYTKLIPANDSA ANASILTQHSVNSSPAQADLYRPHKAKPCKSCPALRGKACLCAMKNEQRKQA >Mature_131_residues SEELTNKQQKCRRKLAKYQQKISHYSQLKDSEISLKKRAAKLCKYRLKIIKRQLKLKRIDAQIVQFAAYTKLIPANDSAA NASILTQHSVNSSPAQADLYRPHKAKPCKSCPALRGKACLCAMKNEQRKQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15043; Mature: 14912
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEELTNKQQKCRRKLAKYQQKISHYSQLKDSEISLKKRAAKLCKYRLKIIKRQLKLKRI CCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAQIVQFAAYTKLIPANDSAANASILTQHSVNSSPAQADLYRPHKAKPCKSCPALRGKAC HHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHH LCAMKNEQRKQA HHHHCCHHHCCC >Mature Secondary Structure SEELTNKQQKCRRKLAKYQQKISHYSQLKDSEISLKKRAAKLCKYRLKIIKRQLKLKRI CCHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAQIVQFAAYTKLIPANDSAANASILTQHSVNSSPAQADLYRPHKAKPCKSCPALRGKAC HHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHH LCAMKNEQRKQA HHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA